Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G943.13 Capsicum annuum HOM05D002887 ORTHO05D003159 3.7e-70 268.1 136 100.0
CAN.G623.95 Capsicum annuum HOM05D002887 ORTHO05D003159 1.2e-63 246.5 136 93.4
CAN.G943.9 Capsicum annuum HOM05D002887 ORTHO05D003159 4.4e-63 244.6 136 92.6
CAN.G2325.1 Capsicum annuum HOM05D002887 ORTHO05D003159 2.2e-62 242.3 136 91.2
CAN.G20378.1 Capsicum annuum HOM05D002887 ORTHO05D003159 1.1e-61 240.0 136 90.4
CAN.G623.102 Capsicum annuum HOM05D002887 ORTHO05D003159 1.2e-55 219.9 136 84.6
CAN.G943.16 Capsicum annuum HOM05D002887 ORTHO05D003159 7.6e-55 217.2 136 83.8
CAN.G4473.1 Capsicum annuum HOM05D002887 ORTHO05D003159 1.7e-51 206.1 135 80.0
CAN.G943.18 Capsicum annuum HOM05D002887 ORTHO05D003159 5.6e-50 201.1 136 77.2
CAN.G4473.2 Capsicum annuum HOM05D002887 ORTHO05D003159 8.1e-49 197.2 115 88.7
CAN.G623.96 Capsicum annuum HOM05D002887 ORTHO05D003159 1.7e-46 189.5 135 74.1
CAN.G623.86 Capsicum annuum HOM05D002887 ORTHO05D003159 7.1e-45 184.1 125 76.8
CAN.G623.98 Capsicum annuum HOM05D002887 ORTHO05D003159 1.6e-41 172.9 121 75.2
CAN.G623.85 Capsicum annuum HOM05D002887 ORTHO05D003159 2.0e-39 166.0 104 82.7
CAN.G623.83 Capsicum annuum HOM05D002887 ORTHO05D003159 1.1e-37 160.2 138 65.9
CAN.G623.87 Capsicum annuum HOM05D002887 ORTHO05D003159 1.1e-37 160.2 138 65.9
CAN.G623.99 Capsicum annuum HOM05D002887 ORTHO05D003159 1.1e-37 160.2 138 65.9
CAN.G943.17 Capsicum annuum HOM05D002887 ORTHO05D003159 1.1e-37 160.2 138 65.9
CAN.G943.7 Capsicum annuum HOM05D002887 ORTHO05D003159 5.5e-37 157.9 138 65.2
CAN.G943.14 Capsicum annuum HOM05D002887 ORTHO05D003159 1.2e-36 156.8 135 64.4
CAN.G943.15 Capsicum annuum HOM05D002887 ORTHO05D003159 1.6e-36 156.4 138 64.5
CAN.G623.89 Capsicum annuum HOM05D002887 ORTHO05D003159 1.3e-35 153.3 138 64.5
CAN.G943.12 Capsicum annuum HOM05D002887 ORTHO05D003159 1.3e-35 153.3 138 63.8
CAN.G943.10 Capsicum annuum HOM05D002887 ORTHO05D003159 8.7e-35 150.6 138 63.0
CAN.G7707.1 Capsicum annuum HOM05D002887 ORTHO05D003159 1.1e-34 150.2 135 63.0
CAN.G623.97 Capsicum annuum HOM05D002887 ORTHO05D003159 3.1e-32 142.1 158 55.1
CAN.G623.93 Capsicum annuum HOM05D002887 ORTHO05D003159 2.5e-29 132.5 81 80.2
CAN.G523.32 Capsicum annuum HOM05D002887 ORTHO05D003159 1.9e-26 122.9 99 64.6
Nitab4.5_0001235g0010 Nicotiana tabacum HOM05D002887 ORTHO05D003159 2.2e-25 119.4 102 61.8
Nitab4.5_0000294g0200 Nicotiana tabacum HOM05D002887 ORTHO05D003159 8.2e-25 117.5 102 60.8
Solyc07g066240.3 Solanum lycopersicum HOM05D002887 ORTHO05D003159 9.0e-24 114.0 138 52.2
Sopen07g034420 Solanum pennellii HOM05D002887 ORTHO05D003159 2.6e-23 112.5 138 51.4
PGSC0003DMG400022247 Solanum tuberosum HOM05D002887 ORTHO05D003159 3.4e-23 112.1 138 50.7
Peaxi162Scf00232g00091 Petunia axillaris HOM05D002887 ORTHO05D003159 1.9e-21 106.3 102 56.9
CAN.G943.19 Capsicum annuum HOM05D002887 ORTHO05D003159 1.3e-17 93.6 55 80.0
Dinv19635 Davidia involucrata HOM05D002887 ORTHO05D003159 4.1e-16 88.6 124 42.7
CAN.G623.103 Capsicum annuum HOM05D002887 ORTHO05D003159 3.8e-14 82.0 55 74.5
BcaB07g33199 Brassica carinata HOM05D002887 ORTHO05D003159 2.1e-12 76.3 116 43.1
AL1G63640 Arabidopsis lyrata HOM05D002887 ORTHO05D003159 3.6e-12 75.5 116 42.2
AT1G55590 Arabidopsis thaliana HOM05D002887 ORTHO05D003159 1.0e-11 73.9 113 42.5
Thhalv10011328m.g Eutrema salsugineum HOM05D002887 ORTHO05D003159 1.0e-11 73.9 116 40.5
BcaC08g43637 Brassica carinata HOM05D002887 ORTHO05D003159 1.4e-11 73.6 116 40.5
A06p00120 Brassica napus HOM05D002887 ORTHO05D003159 1.4e-11 73.6 116 40.5
C06p10530 Brassica napus HOM05D002887 ORTHO05D003159 1.4e-11 73.6 116 40.5
BolC6t36133H Brassica oleracea HOM05D002887 ORTHO05D003159 1.4e-11 73.6 116 40.5
BraA06t23230Z Brassica rapa HOM05D002887 ORTHO05D003159 1.4e-11 73.6 116 40.5
Carub.0001s4411 Capsella rubella HOM05D002887 ORTHO05D003159 1.4e-11 73.6 116 42.2
MBI14_g10260_MAGBIO Magnolia biondii HOM05D002887 ORTHO05D003159 1.4e-11 73.6 107 40.2
Sp1g41210 Schrenkiella parvula HOM05D002887 ORTHO05D003159 3.0e-11 72.4 116 41.4
CSS0039257 Camellia sinensis var. sinensis HOM05D002887 ORTHO05D003159 3.9e-11 72.0 113 39.8
CSS0049070 Camellia sinensis var. sinensis HOM05D002887 ORTHO05D003159 3.9e-11 72.0 113 39.8
TWI39G1273 Tripterygium wilfordii HOM05D002887 ORTHO05D003159 5.1e-11 71.6 115 39.1
Rhsim04G0006800 Rhododendron simsii HOM05D002887 ORTHO05D003159 6.7e-11 71.2 113 40.7
Aa31LG10G620 Aethionema arabicum HOM05D002887 ORTHO05D003159 8.8e-11 70.9 116 38.8
Oeu052878.1 Olea europaea HOM05D002887 ORTHO05D003159 1.1e-10 70.5 91 45.1
ECA236G4850 Erigeron canadensis HOM05D002887 ORTHO05D003159 1.5e-10 70.1 119 38.7
Cc05_g15820 Coffea canephora HOM05D002887 ORTHO05D003159 2.6e-10 69.3 91 42.9
Sed0024070 Sechium edule HOM05D002887 ORTHO05D003159 2.6e-10 69.3 109 42.2
vmacro09794 Vaccinium macrocarpon HOM05D002887 ORTHO05D003159 3.3e-10 68.9 113 40.7
MSTRG.14532 Avicennia marina HOM05D002887 ORTHO05D003159 4.4e-10 68.6 133 39.8
Haze_09925 Corylus avellana HOM05D002887 ORTHO05D003159 7.4e-10 67.8 113 37.2
MELO3C013232.2 Cucumis melo HOM05D002887 ORTHO05D003159 7.4e-10 67.8 113 41.6
CsaV3_7G021230 Cucumis sativus L. HOM05D002887 ORTHO05D003159 7.4e-10 67.8 113 42.5
Manes.06G049300 Manihot esculenta HOM05D002887 ORTHO05D003159 1.3e-09 67.0 107 42.1
HanXRQChr11g0335231 Helianthus annuus HOM05D002887 ORTHO05D003159 1.7e-09 66.6 110 40.0
Prupe.6G036600 Prunus persica HOM05D002887 ORTHO05D003159 1.7e-09 66.6 116 40.5
Cfa016970 Carpinus fangiana HOM05D002887 ORTHO05D003159 2.2e-09 66.2 113 36.3
Sabra11G0137200 Salix brachista HOM05D002887 ORTHO05D003159 2.2e-09 66.2 113 38.1
Actinidia27042 Actinidia chinensis HOM05D002887 ORTHO05D003159 2.8e-09 65.9 91 40.7
Ciclev10007786m.g Citrus clementina HOM05D002887 ORTHO05D003159 2.8e-09 65.9 113 38.1
QL08p000165 Quercus lobata HOM05D002887 ORTHO05D003159 2.8e-09 65.9 113 37.2
MD11G1047600 Malus domestica HOM05D002887 ORTHO05D003159 3.7e-09 65.5 116 37.9
GSVIVG01014858001 Vitis vinifera HOM05D002887 ORTHO05D003159 6.3e-09 64.7 145 31.0
Potri.011G169800 Populus trichocarpa HOM05D002887 ORTHO05D003159 1.4e-08 63.5 113 37.2
SGA_v2.0_scaffold49G18166 Striga asiatica HOM05D002887 ORTHO05D003159 1.8e-08 63.2 125 36.8
DCAR_016809 Daucus carota HOM05D002887 ORTHO05D003159 3.1e-08 62.4 99 37.4
Migut.H01703 Erythranthe guttata HOM05D002887 ORTHO05D003159 3.1e-08 62.4 123 36.6
Lj1C902G8 Lonicera japonica HOM05D002887 ORTHO05D003159 3.1e-08 62.4 113 41.6
FvH4_3g41370 Fragaria vesca HOM05D002887 ORTHO05D003159 7.0e-08 61.2 89 37.1
SEGI_07697 Sequoiadendron giganteum HOM05D002887 ORTHO05D003159 7.0e-08 61.2 88 42.0
FAN21G1274 Fragaria x ananassa HOM05D002887 ORTHO05D003159 9.1e-08 60.8 116 35.3
THA.LOC104810311 Tarenaya hassleriana HOM05D002887 ORTHO05D003159 1.2e-07 60.5 116 37.1
RcHm_v2.0_Chr5g0074291 Rosa chinensis HOM05D002887 ORTHO05D003159 1.5e-07 60.1 92 33.7
ECA236G2003 Erigeron canadensis HOM05D002887 ORTHO05D003159 2.0e-07 59.7 97 40.2
FAN11G2314 Fragaria x ananassa HOM05D002887 ORTHO05D003159 2.0e-07 59.7 89 37.1
Atru.chr2.3909 Acer truncatum HOM05D002887 ORTHO05D003159 3.4e-07 58.9 113 36.3
Eucgr.J00763 Eucalyptus grandis HOM05D002887 ORTHO05D003159 5.9e-07 58.2 127 32.3
CAN.G623.100 Capsicum annuum HOM05D002887 ORTHO05D003159 1.3e-06 57.0 35 74.3
FAN25G0222 Fragaria x ananassa HOM05D002887 ORTHO05D003159 1.7e-06 56.6 89 36.0
HPP92_018919 Vanilla planifolia HOM05D002887 ORTHO05D003159 5.0e-06 55.1 109 33.0
Sed0001540 Sechium edule HOM05D002887 ORTHO05D003159 6.5e-06 54.7 143 32.9
Sed0016468 Sechium edule HOM05D002887 ORTHO05D003159 6.5e-06 54.7 143 32.9


User provided reference genes

Program Settings