Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G941.26 Capsicum annuum HOM05D006739 ORTHO05D008402 1.4e-79 302.0 436 100.0
Sopen06g003030 Solanum pennellii HOM05D006739 ORTHO05D008402 2.4e-31 141.7 436 49.8
PGSC0003DMG400014713 Solanum tuberosum HOM05D006739 ORTHO05D008402 9.0e-31 139.8 438 51.4
PGSC0003DMG400027357 Solanum tuberosum HOM05D006739 ORTHO05D008402 9.0e-31 139.8 438 51.4
Nitab4.5_0002667g0050 Nicotiana tabacum HOM05D006739 ORTHO05D008402 1.4e-23 115.9 441 44.4
Nitab4.5_0002667g0060 Nicotiana tabacum HOM05D006739 ORTHO05D008402 1.8e-23 115.5 213 69.0
Peaxi162Scf01212g00003 Petunia axillaris HOM05D006739 ORTHO05D008402 2.3e-18 98.6 215 68.4
CSS0033703 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 2.0e-17 95.5 131 93.9
MSTRG.24837 Avicennia marina HOM05D006739 ORTHO05D008402 7.4e-17 93.6 96 92.7
AUR62019126 Chenopodium quinoa HOM05D006739 ORTHO05D008402 9.7e-17 93.2 131 91.6
Hma1.2p1_0010F.1_g006410 Hydrangea macrophylla HOM05D006739 ORTHO05D008402 2.8e-16 91.7 96 79.2
Oeu020282.1 Olea europaea HOM05D006739 ORTHO05D008402 2.8e-16 91.7 131 86.3
EL10Ac1g00466 Beta vulgaris HOM05D006739 ORTHO05D008402 4.8e-16 90.9 131 90.1
CSS0036090 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 6.3e-16 90.5 43 95.3
Migut.N00013 Erythranthe guttata HOM05D006739 ORTHO05D008402 1.1e-15 89.7 131 90.8
Ciclev10000605m.g Citrus clementina HOM05D006739 ORTHO05D008402 1.8e-15 89.0 131 82.4
Dinv44882 Davidia involucrata HOM05D006739 ORTHO05D008402 3.1e-15 88.2 131 90.8
RcHm_v2.0_Chr7g0233521 Rosa chinensis HOM05D006739 ORTHO05D008402 4.1e-15 87.8 209 60.3
Sc15g0003370 Simmondsia chinensis HOM05D006739 ORTHO05D008402 5.3e-15 87.4 96 83.3
ECA247G1663 Erigeron canadensis HOM05D006739 ORTHO05D008402 1.5e-14 85.9 131 83.2
QL12p039876 Quercus lobata HOM05D006739 ORTHO05D008402 3.4e-14 84.7 131 82.4
Lsat_1_v5_gn_1_781 Lactuca sativa HOM05D006739 ORTHO05D008402 4.5e-14 84.3 96 86.5
AL1G20500 Arabidopsis lyrata HOM05D006739 ORTHO05D008402 1.3e-13 82.8 131 88.5
Aqoxy5G01872 Aquilegia oxysepala HOM05D006739 ORTHO05D008402 1.7e-13 82.4 131 85.5
Manes.05G187600 Manihot esculenta HOM05D006739 ORTHO05D008402 1.7e-13 82.4 43 83.7
AT1G09900 Arabidopsis thaliana HOM05D006739 ORTHO05D008402 2.2e-13 82.0 131 87.0
Carub.0001s0928 Capsella rubella HOM05D006739 ORTHO05D008402 3.8e-13 81.3 131 87.0
HanXRQChr11g0324241 Helianthus annuus HOM05D006739 ORTHO05D008402 5.0e-13 80.9 43 83.7
TAR628G0153 Trochodendron aralioides HOM05D006739 ORTHO05D008402 5.0e-13 80.9 96 89.6
Eucgr.F02164 Eucalyptus grandis HOM05D006739 ORTHO05D008402 6.5e-13 80.5 43 83.7
FvH4_5g34030 Fragaria vesca HOM05D006739 ORTHO05D008402 6.5e-13 80.5 209 62.7
FAN18G3137 Fragaria x ananassa HOM05D006739 ORTHO05D008402 6.5e-13 80.5 209 62.7
CiPaw.08G057600 Carya illinoinensis HOM05D006739 ORTHO05D008402 8.5e-13 80.1 43 81.4
PSO700G0042 Papaver somniferum HOM05D006739 ORTHO05D008402 8.5e-13 80.1 131 87.8
PSO761G0270 Papaver somniferum HOM05D006739 ORTHO05D008402 8.5e-13 80.1 131 87.8
SalBow5G4649 Salvia bowleyana HOM05D006739 ORTHO05D008402 8.5e-13 80.1 96 88.5
FAN08G0673 Fragaria x ananassa HOM05D006739 ORTHO05D008402 1.1e-12 79.7 209 62.7
MD08G1206600 Malus domestica HOM05D006739 ORTHO05D008402 1.1e-12 79.7 43 83.7
AUR62014385 Chenopodium quinoa HOM05D006739 ORTHO05D008402 1.4e-12 79.3 131 87.8
THA.LOC104816789 Tarenaya hassleriana HOM05D006739 ORTHO05D008402 1.4e-12 79.3 96 84.4
TAR152G0001 Trochodendron aralioides HOM05D006739 ORTHO05D008402 1.4e-12 79.3 130 73.8
Atru.chr13.953 Acer truncatum HOM05D006739 ORTHO05D008402 1.9e-12 79.0 43 83.7
MD15G1390100 Malus domestica HOM05D006739 ORTHO05D008402 1.9e-12 79.0 131 80.2
ClCG08G011830 Citrullus lanatus HOM05D006739 ORTHO05D008402 4.2e-12 77.8 131 88.5
MELO3C011106.2 Cucumis melo HOM05D006739 ORTHO05D008402 4.2e-12 77.8 131 88.5
CsaV3_2G030450 Cucumis sativus L. HOM05D006739 ORTHO05D008402 4.2e-12 77.8 131 87.8
Prupe.1G539000 Prunus persica HOM05D006739 ORTHO05D008402 4.2e-12 77.8 131 87.0
TWI56G0071 Tripterygium wilfordii HOM05D006739 ORTHO05D008402 4.2e-12 77.8 43 83.7
Actinidia10267 Actinidia chinensis HOM05D006739 ORTHO05D008402 5.5e-12 77.4 131 58.0
Ah.05g171720 Amaranthus hybridus HOM05D006739 ORTHO05D008402 5.5e-12 77.4 131 84.7
Aa31LG1G4990 Aethionema arabicum HOM05D006739 ORTHO05D008402 7.2e-12 77.0 131 84.7
BcaC05g24834 Brassica carinata HOM05D006739 ORTHO05D008402 7.2e-12 77.0 131 87.0
CARHR009960 Cardamine hirsuta HOM05D006739 ORTHO05D008402 7.2e-12 77.0 131 86.3
PGR042G0142 Punica granatum HOM05D006739 ORTHO05D008402 7.2e-12 77.0 95 77.9
C05p08020 Brassica napus HOM05D006739 ORTHO05D008402 9.4e-12 76.6 96 83.3
Cfa013823 Carpinus fangiana HOM05D006739 ORTHO05D008402 9.4e-12 76.6 43 81.4
Haze_22495 Corylus avellana HOM05D006739 ORTHO05D008402 1.2e-11 76.3 43 79.1
DCAR_019326 Daucus carota HOM05D006739 ORTHO05D008402 1.6e-11 75.9 43 76.7
Sp1g08530 Schrenkiella parvula HOM05D006739 ORTHO05D008402 1.6e-11 75.9 131 85.5
A06p06610 Brassica napus HOM05D006739 ORTHO05D008402 2.1e-11 75.5 43 76.7
BraA06t23875Z Brassica rapa HOM05D006739 ORTHO05D008402 2.1e-11 75.5 43 76.7
MBI16_g36544_MAGBIO Magnolia biondii HOM05D006739 ORTHO05D008402 2.7e-11 75.1 131 84.7
BolC5t29554H Brassica oleracea HOM05D006739 ORTHO05D008402 3.6e-11 74.7 43 76.7
Glyma.06G092600 Glycine max HOM05D006739 ORTHO05D008402 3.6e-11 74.7 131 86.3
Potri.002G109500 Populus trichocarpa HOM05D006739 ORTHO05D008402 4.7e-11 74.3 131 84.7
Sabra02G0086200 Salix brachista HOM05D006739 ORTHO05D008402 4.7e-11 74.3 43 79.1
Sed0004950 Sechium edule HOM05D006739 ORTHO05D008402 4.7e-11 74.3 41 82.9
VMungo1309G0048 Vigna mungo HOM05D006739 ORTHO05D008402 4.7e-11 74.3 131 84.7
Glyma.04G090900 Glycine max HOM05D006739 ORTHO05D008402 8.0e-11 73.6 131 86.3
Rhsim07G0214200 Rhododendron simsii HOM05D006739 ORTHO05D008402 8.0e-11 73.6 43 79.1
Thecc.08G075400 Theobroma cacao HOM05D006739 ORTHO05D008402 1.4e-10 72.8 131 87.0
Phvul.009G145100 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 1.8e-10 72.4 131 84.7
TAR381G0861 Trochodendron aralioides HOM05D006739 ORTHO05D008402 1.5e-09 69.3 42 73.8
Duzib093G0111 Durio zibethinus HOM05D006739 ORTHO05D008402 4.4e-09 67.8 131 78.6
Gohir.D06G029600 Gossypium hirsutum HOM05D006739 ORTHO05D008402 4.4e-09 67.8 96 82.3
Gorai.010G032500 Gossypium raimondii HOM05D006739 ORTHO05D008402 4.4e-09 67.8 96 82.3
vmacro04630 Vaccinium macrocarpon HOM05D006739 ORTHO05D008402 4.4e-09 67.8 43 74.4
Gohir.A06G030375 Gossypium hirsutum HOM05D006739 ORTHO05D008402 9.7e-09 66.6 96 81.2
SGA_v2.0_scaffold123G33426 Striga asiatica HOM05D006739 ORTHO05D008402 9.7e-09 66.6 37 78.4
ATR0800G015 Amborella trichopoda HOM05D006739 ORTHO05D008402 2.2e-08 65.5 94 68.1
Actinidia19611 Actinidia chinensis HOM05D006739 ORTHO05D008402 2.8e-08 65.1 39 74.4
CDE06G1140 Ceratophyllum demersum HOM05D002753 ORTHO05D003097 2.8e-08 65.1 41 75.6
CDE07G2071 Ceratophyllum demersum HOM05D006739 ORTHO05D008402 2.8e-08 65.1 43 69.8
Lj1g0027306 Lotus japonicus HOM05D006739 ORTHO05D008402 8.2e-08 63.5 40 70.0
Phvul.008G183900 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 8.2e-08 63.5 41 68.3
CDE04G0064 Ceratophyllum demersum HOM05D006739 ORTHO05D008402 1.4e-07 62.8 41 73.2
COL.COLO4_35303 Corchorus olitorius HOM05D006739 ORTHO05D008402 1.8e-07 62.4 40 72.5
VMungo0647G1229 Vigna mungo HOM05D006739 ORTHO05D008402 5.3e-07 60.8 41 65.9
Ca_15539_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 9.1e-07 60.1 43 60.5
Hund26842 Selenicereus undatus HOM05D006739 ORTHO05D008402 9.1e-07 60.1 96 80.2
Glyma.14G184200 Glycine max HOM05D006739 ORTHO05D008402 4.5e-06 57.8 41 61.0
Hund26833 Selenicereus undatus HOM05D006739 ORTHO05D008402 5.9e-06 57.4 95 78.9
Hund26853 Selenicereus undatus HOM05D006739 ORTHO05D008402 5.9e-06 57.4 40 67.5


User provided reference genes

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