Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G938.4 Capsicum annuum HOM05D000654 ORTHO05D002330 4.3e-66 254.6 135 100.0
CAN.G1666.1 Capsicum annuum HOM05D000654 ORTHO05D002330 4.6e-28 128.3 90 80.0
CAN.G802.3 Capsicum annuum HOM05D000654 ORTHO05D002330 1.6e-25 119.8 87 77.0
CAN.G537.9 Capsicum annuum HOM05D000654 ORTHO05D002330 5.3e-24 114.8 79 79.7
CAN.G385.11 Capsicum annuum HOM05D000654 ORTHO05D002330 8.4e-22 107.5 102 65.7
CAN.G640.1 Capsicum annuum HOM05D000654 ORTHO05D002330 4.2e-21 105.1 88 71.6
CAN.G27.45 Capsicum annuum HOM05D000654 ORTHO05D002330 6.0e-20 101.3 86 69.8
CAN.G437.20 Capsicum annuum HOM05D000654 ORTHO05D002330 2.3e-19 99.4 92 64.1
Sopen06g020440 Solanum pennellii HOM05D000654 ORTHO05D002330 3.0e-19 99.0 101 63.4
Solyc06g060320.4 Solanum lycopersicum HOM05D000654 ORTHO05D002330 3.9e-19 98.6 101 63.4
Nitab4.5_0000322g0170 Nicotiana tabacum HOM05D000654 ORTHO05D002330 1.3e-17 93.6 101 59.4
Nitab4.5_0004044g0010 Nicotiana tabacum HOM05D000654 ORTHO05D002330 1.6e-17 93.2 101 60.4
Peaxi162Scf00051g00107 Petunia axillaris HOM05D000654 ORTHO05D002330 3.6e-17 92.0 65 80.0
Nitab4.5_0001803g0040 Nicotiana tabacum HOM05D000654 ORTHO05D002330 6.9e-16 87.8 65 75.4
Nitab4.5_0001996g0070 Nicotiana tabacum HOM05D000654 ORTHO05D002330 7.6e-15 84.3 65 73.8
PGSC0003DMG400000896 Solanum tuberosum HOM05D000654 ORTHO05D002330 2.9e-14 82.4 65 72.3
Sopen11g007600 Solanum pennellii HOM05D000654 ORTHO05D002330 6.4e-14 81.3 65 70.8
Hma1.2p1_0129F.1_g060210 Hydrangea macrophylla HOM05D000654 ORTHO05D002330 1.2e-12 77.0 65 66.2
MSTRG.1439 Avicennia marina HOM05D000654 ORTHO05D002330 1.3e-11 73.6 65 66.2
SalBow7G1808 Salvia bowleyana HOM05D000654 ORTHO05D002330 2.3e-11 72.8 65 64.6
HanXRQChr05g0151081 Helianthus annuus HOM05D000654 ORTHO05D002330 8.7e-11 70.9 59 71.2
Potri.005G178100 Populus trichocarpa HOM05D000654 ORTHO05D002330 8.7e-11 70.9 65 63.1
Sabra02G0065400 Salix brachista HOM05D000654 ORTHO05D002330 3.3e-10 68.9 87 55.2
Eucgr.F04348 Eucalyptus grandis HOM05D000654 ORTHO05D002330 4.3e-10 68.6 62 62.9
Migut.N03280 Erythranthe guttata HOM05D000654 ORTHO05D002330 5.6e-10 68.2 101 50.5
Gohir.A06G044900 Gossypium hirsutum HOM05D000654 ORTHO05D002330 5.6e-10 68.2 66 62.1
Gohir.D06G045400 Gossypium hirsutum HOM05D000654 ORTHO05D002330 5.6e-10 68.2 66 62.1
Gorai.010G050400 Gossypium raimondii HOM05D000654 ORTHO05D002330 5.6e-10 68.2 66 62.1
Actinidia02621 Actinidia chinensis HOM05D000654 ORTHO05D002330 7.4e-10 67.8 72 58.3
MSTRG.25380 Avicennia marina HOM05D000654 ORTHO05D002330 7.4e-10 67.8 80 52.5
Hma1.2p1_1519F.1_g288570 Hydrangea macrophylla HOM05D000654 ORTHO05D002330 7.4e-10 67.8 59 66.1
HanXRQChr10g0304071 Helianthus annuus HOM05D000654 ORTHO05D002330 1.3e-09 67.0 86 51.2
Gorai.009G245900 Gossypium raimondii HOM05D000654 ORTHO05D002330 1.6e-09 66.6 66 59.1
GSVIVG01008864001 Vitis vinifera HOM05D000654 ORTHO05D002330 1.6e-09 66.6 65 58.5
ECA246G2305 Erigeron canadensis HOM05D000654 ORTHO05D002330 2.1e-09 66.2 59 67.8
Potri.002G083400 Populus trichocarpa HOM05D000654 ORTHO05D002330 2.1e-09 66.2 87 52.9
Lj7C341T3 Lonicera japonica HOM05D000654 ORTHO05D002330 3.7e-09 65.5 65 56.9
Lju12250C0T2 Lonicera japonica HOM05D000654 ORTHO05D002330 3.7e-09 65.5 65 56.9
Dinv07217 Davidia involucrata HOM05D000654 ORTHO05D002330 4.8e-09 65.1 63 61.9
PSO528G0099 Papaver somniferum HOM05D000654 ORTHO05D002330 4.8e-09 65.1 62 62.9
QL10p040142 Quercus lobata HOM05D000654 ORTHO05D002330 4.8e-09 65.1 54 66.7
DCAR_014389 Daucus carota HOM05D000654 ORTHO05D002330 8.2e-09 64.3 65 60.0
Gohir.D05G237500 Gossypium hirsutum HOM05D000654 ORTHO05D002330 8.2e-09 64.3 66 57.6
Manes.02G163500 Manihot esculenta HOM05D000654 ORTHO05D002330 8.2e-09 64.3 80 52.5
MD08G1162500 Malus domestica HOM05D000654 ORTHO05D002330 1.1e-08 63.9 62 62.9
Manes.18G077439 Manihot esculenta HOM05D000654 ORTHO05D002330 1.1e-08 63.9 67 61.2
GSVIVG01022370001 Vitis vinifera HOM05D000654 ORTHO05D002330 1.1e-08 63.9 79 50.6
CiPaw.03G115400 Carya illinoinensis HOM05D000654 ORTHO05D002330 1.4e-08 63.5 56 64.3
vmacro12533 Vaccinium macrocarpon HOM05D000654 ORTHO05D002330 1.4e-08 63.5 65 58.5
CANSAT01G2067 Cannabis sativa HOM05D000654 ORTHO05D002330 1.8e-08 63.2 59 62.7
COL.COLO4_12114 Corchorus olitorius HOM05D000654 ORTHO05D002330 1.8e-08 63.2 60 56.7
Dinv27310 Davidia involucrata HOM05D000654 ORTHO05D002330 1.8e-08 63.2 65 58.5
TAR376G0691 Trochodendron aralioides HOM05D000654 ORTHO05D002330 1.8e-08 63.2 62 56.5
Dinv40960 Davidia involucrata HOM05D000654 ORTHO05D002330 2.4e-08 62.8 59 61.0
Rhsim06G0103200 Rhododendron simsii HOM05D000654 ORTHO05D002330 2.4e-08 62.8 65 58.5
Sc16g0009680 Simmondsia chinensis HOM05D000654 ORTHO05D002330 2.4e-08 62.8 59 61.0
SGA_v2.0_scaffold25G11129 Striga asiatica HOM05D000654 ORTHO05D002330 2.4e-08 62.8 97 45.4
Actinidia16515 Actinidia chinensis HOM05D000654 ORTHO05D002330 3.1e-08 62.4 59 61.0
Sabra07G0081900 Salix brachista HOM05D000654 ORTHO05D002330 3.1e-08 62.4 70 55.7
Aqoxy6G00220 Aquilegia oxysepala HOM05D000654 ORTHO05D002330 4.0e-08 62.0 54 63.0
CiPaw.04G077200 Carya illinoinensis HOM05D000654 ORTHO05D002330 4.0e-08 62.0 54 66.7
Cc10_g11930 Coffea canephora HOM05D000654 ORTHO05D002330 4.0e-08 62.0 65 55.4
Sabra05G0134500 Salix brachista HOM05D000654 ORTHO05D002330 4.0e-08 62.0 65 58.5
CiPaw.05G221200 Carya illinoinensis HOM05D000654 ORTHO05D002330 5.3e-08 61.6 71 56.3
Lsat_1_v5_gn_6_112901 Lactuca sativa HOM05D000654 ORTHO05D002330 5.3e-08 61.6 55 67.3
Rhsim10G0129600 Rhododendron simsii HOM05D000654 ORTHO05D002330 6.9e-08 61.2 59 61.0
Atru.chr13.1463 Acer truncatum HOM05D000654 ORTHO05D002330 9.0e-08 60.8 65 58.5
Atru.chr13.1485 Acer truncatum HOM05D000654 ORTHO05D002330 9.0e-08 60.8 65 58.5
CSS0013859 Camellia sinensis var. sinensis HOM05D000654 ORTHO05D002330 9.0e-08 60.8 67 56.7
AUR62006906 Chenopodium quinoa HOM05D000654 ORTHO05D002330 9.0e-08 60.8 65 52.3
Lj2A608T38 Lonicera japonica HOM05D000654 ORTHO05D002330 9.0e-08 60.8 60 63.3
Nn5g28299 Nelumbo nucifera HOM05D000654 ORTHO05D002330 9.0e-08 60.8 76 47.4
Potri.007G098500 Populus trichocarpa HOM05D000654 ORTHO05D002330 1.2e-07 60.5 61 57.4
Thecc.01G142000 Theobroma cacao HOM05D000654 ORTHO05D002330 1.2e-07 60.5 58 60.3
Cpa.g.sc64.89 Carica papaya HOM05D000654 ORTHO05D002330 1.5e-07 60.1 63 55.6
TWI60G0616 Tripterygium wilfordii HOM05D000654 ORTHO05D002330 1.5e-07 60.1 61 57.4
Duzib187G1539 Durio zibethinus HOM05D000654 ORTHO05D002330 2.0e-07 59.7 67 52.2
vmacro12770 Vaccinium macrocarpon HOM05D000654 ORTHO05D002330 2.0e-07 59.7 74 52.7
Eucgr.H05077 Eucalyptus grandis HOM05D000654 ORTHO05D002330 2.6e-07 59.3 55 61.8
Nn1g08795 Nelumbo nucifera HOM05D000654 ORTHO05D002330 2.6e-07 59.3 61 60.7
Oeu028235.1 Olea europaea HOM05D000654 ORTHO05D002330 2.6e-07 59.3 60 60.0
Potri.005G070400 Populus trichocarpa HOM05D000654 ORTHO05D002330 2.6e-07 59.3 54 61.1
TWI79G0039 Tripterygium wilfordii HOM05D000654 ORTHO05D002330 2.6e-07 59.3 57 59.6
AUR62000554 Chenopodium quinoa HOM05D000654 ORTHO05D002330 3.4e-07 58.9 62 56.5
Gohir.A05G235200 Gossypium hirsutum HOM05D000654 ORTHO05D002330 3.4e-07 58.9 63 55.6
MBI09_g42045_MAGBIO Magnolia biondii HOM05D000654 ORTHO05D002330 3.4e-07 58.9 91 45.1
Ah.02g117680 Amaranthus hybridus HOM05D000654 ORTHO05D002330 4.5e-07 58.5 62 56.5
MELO3C010611.2 Cucumis melo HOM05D000654 ORTHO05D002330 4.5e-07 58.5 75 53.3
Prupe.4G281900 Prunus persica HOM05D000654 ORTHO05D002330 4.5e-07 58.5 52 67.3
RcHm_v2.0_Chr6g0295851 Rosa chinensis HOM05D000654 ORTHO05D002330 4.5e-07 58.5 59 55.9
DCAR_030969 Daucus carota HOM05D000654 ORTHO05D002330 5.8e-07 58.2 70 54.3
FAN28G2592 Fragaria x ananassa HOM05D000654 ORTHO05D002330 5.8e-07 58.2 59 62.7
TAR381G0379 Trochodendron aralioides HOM05D000654 ORTHO05D002330 5.8e-07 58.2 62 59.7
Atru.chr4.1113 Acer truncatum HOM05D000654 ORTHO05D002330 7.6e-07 57.8 48 66.7
Ah.06g188580 Amaranthus hybridus HOM05D000654 ORTHO05D002330 7.6e-07 57.8 63 54.0
CDE08G1638 Ceratophyllum demersum HOM05D000654 ORTHO05D002330 7.6e-07 57.8 62 54.8
FAN23G0506 Fragaria x ananassa HOM05D000654 ORTHO05D002330 7.6e-07 57.8 89 47.2
Oeu050104.2 Olea europaea HOM05D000654 ORTHO05D002330 7.6e-07 57.8 60 56.7
TAR625G0483 Trochodendron aralioides HOM05D000654 ORTHO05D002330 7.6e-07 57.8 57 63.2
CDE02G3776 Ceratophyllum demersum HOM05D001512 ORTHO05D001574 1.0e-06 57.4 60 58.3
Sabra05G0057200 Salix brachista HOM05D000654 ORTHO05D002330 1.0e-06 57.4 54 59.3
CsaV3_6G034470 Cucumis sativus L. HOM05D000654 ORTHO05D002330 1.3e-06 57.0 75 52.0
AT1G77580 Arabidopsis thaliana HOM05D000654 ORTHO05D002330 1.7e-06 56.6 61 55.7
ClCG08G005650 Citrullus lanatus HOM05D000654 ORTHO05D002330 1.7e-06 56.6 90 44.4
Nitab4.5_0010345g0020 Nicotiana tabacum HOM05D000654 ORTHO05D002330 1.7e-06 56.6 57 59.6
RcHm_v2.0_Chr2g0123661 Rosa chinensis HOM05D000654 ORTHO05D002330 1.7e-06 56.6 68 55.9
CSS0002986 Camellia sinensis var. sinensis HOM05D000654 ORTHO05D002330 2.2e-06 56.2 54 64.8
Nitab4.5_0000856g0180 Nicotiana tabacum HOM05D000654 ORTHO05D002330 2.2e-06 56.2 54 63.0
Hund07210 Selenicereus undatus HOM05D000654 ORTHO05D002330 2.2e-06 56.2 84 45.2
TWI75G0583 Tripterygium wilfordii HOM05D000654 ORTHO05D002330 2.2e-06 56.2 58 58.6
Gohir.D10G107200 Gossypium hirsutum HOM05D000654 ORTHO05D002330 2.9e-06 55.8 62 58.1
Gorai.011G117600 Gossypium raimondii HOM05D000654 ORTHO05D002330 2.9e-06 55.8 62 58.1
Aa31LG5G15760 Aethionema arabicum HOM05D000654 ORTHO05D002330 3.8e-06 55.5 55 58.2
Ciclev10000438m.g Citrus clementina HOM05D000654 ORTHO05D002330 3.8e-06 55.5 59 59.3
Ciclev10000549m.g Citrus clementina HOM05D000654 ORTHO05D002330 3.8e-06 55.5 110 39.1
DCAR_002180 Daucus carota HOM05D000654 ORTHO05D002330 3.8e-06 55.5 59 55.9
MD15G1138800 Malus domestica HOM05D000654 ORTHO05D002330 3.8e-06 55.5 52 63.5
Sed0008177 Sechium edule HOM05D000654 ORTHO05D002330 3.8e-06 55.5 92 43.5
Thecc.08G125700 Theobroma cacao HOM05D000654 ORTHO05D002330 3.8e-06 55.5 58 56.9
COL.COLO4_08076 Corchorus olitorius HOM05D000654 ORTHO05D002330 4.9e-06 55.1 55 61.8
SGA_v2.0_scaffold28G11995 Striga asiatica HOM05D000654 ORTHO05D002330 4.9e-06 55.1 101 44.6
TPR.G7853 Trifolium pratense HOM05D000654 ORTHO05D002330 4.9e-06 55.1 73 53.4
Carub.0002s2447 Capsella rubella HOM05D000654 ORTHO05D002330 6.5e-06 54.7 61 54.1
CARHR071090 Cardamine hirsuta HOM05D000654 ORTHO05D002330 6.5e-06 54.7 54 59.3
FvH4_1g25530 Fragaria vesca HOM05D000654 ORTHO05D002330 6.5e-06 54.7 86 46.5
FAN19G1344 Fragaria x ananassa HOM05D000654 ORTHO05D002330 6.5e-06 54.7 86 46.5
QL09p034567 Quercus lobata HOM05D000654 ORTHO05D002330 6.5e-06 54.7 59 52.5
Cc07_g19530 Coffea canephora HOM05D000654 ORTHO05D002330 8.4e-06 54.3 58 60.3
Gohir.A10G067800 Gossypium hirsutum HOM05D000654 ORTHO05D002330 8.4e-06 54.3 62 56.5
Sp5g32730 Schrenkiella parvula HOM05D000654 ORTHO05D002330 8.4e-06 54.3 58 53.4


User provided reference genes

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