Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G936.4 Capsicum annuum HOM05D008518 ORTHO05D010253 2.4e-130 468.8 223 100.0
Peaxi162Scf00186g01113 Petunia axillaris HOM05D008518 ORTHO05D010253 2.3e-48 196.4 162 63.6
Peaxi162Scf01343g00153 Petunia axillaris HOM05D008518 ORTHO05D010253 4.0e-45 185.7 184 54.9
Peaxi162Scf00193g00712 Petunia axillaris HOM05D008518 ORTHO05D010253 5.2e-45 185.3 158 61.4
Peaxi162Scf00035g00163 Petunia axillaris HOM05D008518 ORTHO05D010253 2.1e-41 173.3 183 52.5
CAN.G474.1 Capsicum annuum HOM05D000045 ORTHO05D000067 2.7e-41 172.9 118 73.7
CAN.G531.14 Capsicum annuum HOM05D008518 ORTHO05D010253 6.0e-41 171.8 103 75.7
Nitab4.5_0007303g0080 Nicotiana tabacum HOM05D008518 ORTHO05D010253 7.8e-41 171.4 241 44.0
Nitab4.5_0005347g0050 Nicotiana tabacum HOM05D008518 ORTHO05D010253 7.3e-39 164.9 197 50.3
CAN.G402.1 Capsicum annuum HOM05D008518 ORTHO05D010253 6.2e-38 161.8 101 72.3
Peaxi162Scf00057g00055 Petunia axillaris HOM05D008518 ORTHO05D010253 1.5e-36 157.1 156 53.2
Solyc03g044690.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 2.3e-32 143.3 107 67.3
Peaxi162Scf00044g00179 Petunia axillaris HOM05D008518 ORTHO05D010253 1.5e-31 140.6 168 48.2
Nitab4.5_0006102g0030 Nicotiana tabacum HOM05D008518 ORTHO05D010253 1.3e-30 137.5 122 55.7
Peaxi162Scf00148g00123 Petunia axillaris HOM05D000045 ORTHO05D010253 1.6e-30 137.1 118 61.9
Nitab4.5_0006770g0070 Nicotiana tabacum HOM05D008518 ORTHO05D010253 3.6e-30 136.0 111 60.4
Peaxi162Scf00300g00029 Petunia axillaris HOM05D008518 ORTHO05D010253 6.9e-29 131.7 151 51.0
Nitab4.5_0009643g0010 Nicotiana tabacum HOM05D008518 ORTHO05D010253 6.4e-27 125.2 230 36.1
Nitab4.5_0007280g0050 Nicotiana tabacum HOM05D008518 ORTHO05D010253 3.1e-21 106.3 74 62.2
Peaxi162Scf00194g00110 Petunia axillaris HOM05D008518 ORTHO05D010253 2.6e-20 103.2 70 67.1
Nitab4.5_0000091g0310 Nicotiana tabacum HOM05D008518 ORTHO05D010253 2.9e-19 99.8 127 45.7
Peaxi162Scf00703g00234 Petunia axillaris HOM05D008518 ORTHO05D010253 1.9e-18 97.1 58 74.1
TWI74G1582 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.2e-17 94.4 98 42.9
CAN.G135.37 Capsicum annuum HOM05D002460 ORTHO05D021098 1.6e-17 94.0 50 92.0
TWI31G1385 Tripterygium wilfordii HOM05D000045 ORTHO05D010253 1.8e-16 90.5 98 41.8
TWI74G0276 Tripterygium wilfordii HOM05D000045 ORTHO05D010253 1.8e-16 90.5 98 41.8
TWI74G1604 Tripterygium wilfordii HOM05D000045 ORTHO05D010253 1.8e-16 90.5 98 41.8
TWI63G0656 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 3.9e-16 89.4 98 40.8
Eucgr.B01589 Eucalyptus grandis HOM05D000045 ORTHO05D000067 4.3e-15 85.9 95 46.3
Eucgr.C01967 Eucalyptus grandis HOM05D000045 ORTHO05D000067 1.1e-13 81.3 103 38.8
Eucgr.H01407 Eucalyptus grandis HOM05D000045 ORTHO05D000067 1.8e-13 80.5 95 42.1
Rhsim04G0143500 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.0e-12 77.0 92 37.0
Eucgr.B00042 Eucalyptus grandis HOM05D000045 ORTHO05D000067 5.8e-12 75.5 98 38.8
Peaxi162Scf00170g01230 Petunia axillaris HOM05D008518 ORTHO05D010253 7.6e-12 75.1 55 63.6
Peaxi162Scf00057g02122 Petunia axillaris HOM05D008518 ORTHO05D010253 1.3e-11 74.3 45 73.3
Eucgr.E01219 Eucalyptus grandis HOM05D000045 ORTHO05D000067 2.2e-11 73.6 95 38.9
Eucgr.I00824 Eucalyptus grandis HOM05D000045 ORTHO05D000067 2.2e-11 73.6 98 38.8
CAN.G108.51 Capsicum annuum HOM05D000045 ORTHO05D011407 2.9e-11 73.2 96 44.8
Peaxi162Scf00109g00015 Petunia axillaris HOM05D008518 ORTHO05D010253 2.9e-11 73.2 120 41.7
Eucgr.J01116 Eucalyptus grandis HOM05D000045 ORTHO05D000067 3.8e-11 72.8 98 38.8
Eucgr.C03166 Eucalyptus grandis HOM05D000045 ORTHO05D010253 4.9e-11 72.4 95 37.9
Atru.chr9.622 Acer truncatum HOM05D000045 ORTHO05D000067 1.1e-10 71.2 110 34.5
QL05p056997 Quercus lobata HOM05D000045 ORTHO05D000067 1.1e-10 71.2 88 35.2
Nitab4.5_0003811g0050 Nicotiana tabacum HOM05D008518 ORTHO05D010253 1.4e-10 70.9 49 63.3
CAN.G823.11 Capsicum annuum HOM05D000045 ORTHO05D011407 1.9e-10 70.5 64 56.2
Eucgr.B01259 Eucalyptus grandis HOM05D000045 ORTHO05D000067 3.2e-10 69.7 83 39.8
Atru.chr10.181 Acer truncatum HOM05D000045 ORTHO05D012015 4.2e-10 69.3 108 36.1
Eucgr.I00868 Eucalyptus grandis HOM05D008518 ORTHO05D010253 4.2e-10 69.3 76 43.4
QL93p0049_0121 Quercus lobata HOM05D000045 ORTHO05D000067 5.5e-10 68.9 88 34.1
Atru.chr9.1073 Acer truncatum HOM05D000045 ORTHO05D010253 2.7e-09 66.6 108 36.1
Peaxi162Scf00276g00001 Petunia axillaris HOM05D008518 ORTHO05D010253 3.0e-08 63.2 63 55.6
Eucgr.L03237 Eucalyptus grandis HOM05D008518 ORTHO05D010253 1.1e-07 61.2 60 43.3
Peaxi162Scf00056g00204 Petunia axillaris HOM05D008518 ORTHO05D010253 1.1e-07 61.2 65 53.8
Prupe.2G147900 Prunus persica HOM05D000045 ORTHO05D000067 1.1e-07 61.2 107 31.8
MD02G1139600 Malus domestica HOM05D000045 ORTHO05D000067 1.5e-07 60.8 125 32.8
COL.COLO4_15687 Corchorus olitorius HOM05D000045 ORTHO05D010736 2.5e-07 60.1 105 30.5
FvH4_2g07051 Fragaria vesca HOM05D000045 ORTHO05D010253 5.7e-07 58.9 84 34.5
CAN.G175.23 Capsicum annuum HOM05D000002 ORTHO05D000001 4.8e-06 55.8 61 44.3
Peaxi162Scf00170g01227 Petunia axillaris HOM05D000416 ORTHO05D000322 4.8e-06 55.8 33 66.7
PGR044G2175 Punica granatum HOM05D000045 ORTHO05D000067 6.3e-06 55.5 100 29.0
Hma1.2p1_0177F.1_g078085 Hydrangea macrophylla HOM05D000045 ORTHO05D010736 8.2e-06 55.1 52 44.2


User provided reference genes

Program Settings