Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G935.4 Capsicum annuum HOM05D003841 ORTHO05D004602 1.3e-55 219.5 115 100.0
PGSC0003DMG400019273 Solanum tuberosum HOM05D003841 ORTHO05D000515 8.7e-28 127.1 100 65.0
Sopen07g032000 Solanum pennellii HOM05D003841 ORTHO05D004602 1.9e-27 125.9 98 65.3
Nitab4.5_0000552g0100 Nicotiana tabacum HOM05D003841 ORTHO05D004602 2.5e-27 125.6 98 68.4
Solyc07g063870.3 Solanum lycopersicum HOM05D003841 ORTHO05D004602 2.1e-26 122.5 98 63.3
Nitab4.5_0003052g0050 Nicotiana tabacum HOM05D003841 ORTHO05D004602 5.3e-25 117.9 98 67.3
Peaxi162Scf01365g00027 Petunia axillaris HOM05D003841 ORTHO05D004602 2.2e-23 112.5 101 61.4
CAN.G777.9 Capsicum annuum HOM05D003841 ORTHO05D004602 1.6e-21 106.3 100 61.0
CAN.G22.51 Capsicum annuum HOM05D000121 ORTHO05D000102 6.9e-17 90.9 76 63.2
CAN.G1207.10 Capsicum annuum HOM05D003841 ORTHO05D004602 2.0e-16 89.4 56 80.4
CAN.G952.3 Capsicum annuum HOM05D003841 ORTHO05D004602 4.5e-16 88.2 49 87.8
CAN.G1160.11 Capsicum annuum HOM05D003841 ORTHO05D004602 2.9e-15 85.5 49 81.6
Dinv02831 Davidia involucrata HOM05D003841 ORTHO05D004602 1.5e-11 73.2 98 42.9
Dinv22328 Davidia involucrata HOM05D003841 ORTHO05D004602 2.5e-11 72.4 98 40.8
Cc05_g12980 Coffea canephora HOM05D003841 ORTHO05D004602 7.4e-11 70.9 97 41.2
CSS0048456 Camellia sinensis var. sinensis HOM05D003841 ORTHO05D004602 8.2e-10 67.4 98 41.8
Actinidia10692 Actinidia chinensis HOM05D003841 ORTHO05D004602 1.1e-09 67.0 100 42.0
Actinidia05162 Actinidia chinensis HOM05D003841 ORTHO05D004602 1.8e-09 66.2 48 60.4
Lj1A861T58 Lonicera japonica HOM05D003841 ORTHO05D004602 3.1e-09 65.5 99 37.4
CSS0046033 Camellia sinensis var. sinensis HOM05D003841 ORTHO05D004602 5.3e-09 64.7 112 37.5
Oeu005438.1 Olea europaea HOM05D003841 ORTHO05D004602 5.3e-09 64.7 49 57.1
Oeu052335.1 Olea europaea HOM05D003841 ORTHO05D004602 6.9e-09 64.3 49 61.2
Actinidia35303 Actinidia chinensis HOM05D003841 ORTHO05D004602 2.6e-08 62.4 99 41.4
FAN25G3758 Fragaria x ananassa HOM05D003841 ORTHO05D004602 5.9e-08 61.2 66 42.4
TAR271G0005 Trochodendron aralioides HOM05D003841 ORTHO05D004602 5.9e-08 61.2 98 40.8
TAR271G0006 Trochodendron aralioides HOM05D003841 ORTHO05D004602 7.7e-08 60.8 98 40.8
FvH4_3g21510 Fragaria vesca HOM05D003841 ORTHO05D004602 1.0e-07 60.5 75 38.7
Lsat_1_v5_gn_7_107821 Lactuca sativa HOM05D003841 ORTHO05D004602 1.0e-07 60.5 98 36.7
vmacro11787 Vaccinium macrocarpon HOM05D003841 ORTHO05D004602 1.0e-07 60.5 100 37.0
CAN.G362.43 Capsicum annuum HOM05D003841 ORTHO05D004602 1.3e-07 60.1 37 81.1
CANSAT11G1059 Cannabis sativa HOM05D003841 ORTHO05D004602 1.7e-07 59.7 95 38.9
GSVIVG01014549001 Vitis vinifera HOM05D003841 ORTHO05D004602 1.7e-07 59.7 49 57.1
FAN11G1553 Fragaria x ananassa HOM05D003841 ORTHO05D004602 2.2e-07 59.3 78 38.5
HanXRQChr11g0332121 Helianthus annuus HOM05D003841 ORTHO05D004602 2.2e-07 59.3 97 37.1
Ah.06g183230 Amaranthus hybridus HOM05D003841 ORTHO05D004602 2.9e-07 58.9 99 37.4
CAN.G183.13 Capsicum annuum HOM05D003841 ORTHO05D004602 2.9e-07 58.9 37 78.4
TWI39G0875 Tripterygium wilfordii HOM05D003841 ORTHO05D004602 2.9e-07 58.9 75 40.0
CAN.G526.7 Capsicum annuum HOM05D009195 ORTHO05D000137 3.8e-07 58.5 37 75.7
FAN21G0547 Fragaria x ananassa HOM05D003841 ORTHO05D004602 3.8e-07 58.5 86 34.9
Gohir.A13G142900 Gossypium hirsutum HOM05D003841 ORTHO05D004602 3.8e-07 58.5 82 42.7
Manes.15G079400 Manihot esculenta HOM05D003841 ORTHO05D004602 3.8e-07 58.5 95 37.9
Nn1g06911 Nelumbo nucifera HOM05D003841 ORTHO05D004602 3.8e-07 58.5 97 36.1
QL08p014515 Quercus lobata HOM05D003841 ORTHO05D004602 5.0e-07 58.2 67 38.8
SGA_v2.0_scaffold9G05000 Striga asiatica HOM05D003841 ORTHO05D004602 1.1e-06 57.0 90 36.7
Rhsim06G0190700 Rhododendron simsii HOM05D003841 ORTHO05D004602 1.4e-06 56.6 114 31.6
RhsimUnG0254800 Rhododendron simsii HOM05D003841 ORTHO05D004602 1.4e-06 56.6 49 51.0
Aa31LG3G10490 Aethionema arabicum HOM05D003841 ORTHO05D004602 1.9e-06 56.2 56 48.2
CiPaw.12G124700 Carya illinoinensis HOM05D003841 ORTHO05D004602 1.9e-06 56.2 98 37.8
Rhsim06G0189000 Rhododendron simsii HOM05D003841 ORTHO05D004602 1.9e-06 56.2 114 34.2
Thecc.07G059100 Theobroma cacao HOM05D003841 ORTHO05D004602 1.9e-06 56.2 90 42.2
vmacro09595 Vaccinium macrocarpon HOM05D003841 ORTHO05D004602 1.9e-06 56.2 89 40.4
TAR627G0073 Trochodendron aralioides HOM05D003841 ORTHO05D004602 2.5e-06 55.8 112 34.8
THA.LOC104799894 Tarenaya hassleriana HOM05D003841 ORTHO05D004602 3.2e-06 55.5 53 54.7
PSO675G5063 Papaver somniferum HOM05D003841 ORTHO05D004602 4.2e-06 55.1 41 53.7
TWI38G0390 Tripterygium wilfordii HOM05D003841 ORTHO05D004602 4.2e-06 55.1 86 36.0
MD03G1215500 Malus domestica HOM05D003841 ORTHO05D004602 5.5e-06 54.7 70 40.0
FAN16G3040 Fragaria x ananassa HOM05D003841 ORTHO05D004602 7.2e-06 54.3 75 37.3
CAN.G64.40 Capsicum annuum HOM05D003841 ORTHO05D004602 9.4e-06 53.9 36 72.2
ECA236G3199 Erigeron canadensis HOM05D003841 ORTHO05D004602 9.4e-06 53.9 90 38.9
Gohir.D13G147500 Gossypium hirsutum HOM05D003841 ORTHO05D004602 9.4e-06 53.9 82 40.2


User provided reference genes

Program Settings