Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G934.2 Capsicum annuum HOM05D007207 ORTHO05D009041 3.8e-143 512.3 456 100.0
Sopen06g007140 Solanum pennellii HOM05D007207 ORTHO05D009041 9.3e-57 225.3 477 57.0
PGSC0003DMG401030137 Solanum tuberosum HOM05D038777 ORTHO05D009041 1.1e-54 218.4 436 61.9
Solyc06g016750.3 Solanum lycopersicum HOM05D007207 ORTHO05D009041 1.5e-46 191.4 479 50.5
Peaxi162Scf00686g00043 Petunia axillaris HOM05D007207 ORTHO05D009041 1.4e-41 174.9 104 83.7
MSTRG.17815 Avicennia marina HOM05D007207 ORTHO05D009041 1.7e-34 151.4 103 68.9
Dinv32761 Davidia involucrata HOM05D007207 ORTHO05D009041 2.7e-32 144.1 104 67.3
Hma1.2p1_1030F.1_g249850 Hydrangea macrophylla HOM05D007207 ORTHO05D009041 1.1e-30 138.7 100 67.0
Lsat_1_v5_gn_1_65500 Lactuca sativa HOM05D007207 ORTHO05D009041 2.6e-30 137.5 103 63.1
Actinidia20448 Actinidia chinensis HOM05D007207 ORTHO05D009041 7.4e-30 136.0 95 71.6
SalBow3G2981 Salvia bowleyana HOM05D007207 ORTHO05D009041 8.2e-29 132.5 103 57.3
Cc01_g11290 Coffea canephora HOM05D007207 ORTHO05D009041 3.1e-28 130.6 99 60.6
HanXRQChr01g0018341 Helianthus annuus HOM05D007207 ORTHO05D009041 1.2e-27 128.6 138 49.3
ECA248G1375 Erigeron canadensis HOM05D000214 ORTHO05D000131 3.8e-26 123.6 139 49.6
Nn2g13070 Nelumbo nucifera HOM05D007207 ORTHO05D009041 3.8e-26 123.6 99 64.6
SGA_v2.0_scaffold80G25756 Striga asiatica HOM05D007207 ORTHO05D009041 6.5e-26 122.9 139 44.6
CiPaw.13G111000 Carya illinoinensis HOM05D007207 ORTHO05D009041 4.7e-24 116.7 97 56.7
TWI79G0777 Tripterygium wilfordii HOM05D007207 ORTHO05D009041 4.7e-24 116.7 179 42.5
MD03G1114400 Malus domestica HOM05D007207 ORTHO05D009041 1.0e-23 115.5 165 39.4
Psat7g224520 Pisum sativum HOM05D007207 ORTHO05D009041 1.4e-23 115.2 96 60.4
TAR633G1504 Trochodendron aralioides HOM05D000656 ORTHO05D000871 1.8e-23 114.8 97 56.7
Ca_05249_v3 Cicer arietinum L. HOM05D007207 ORTHO05D009041 3.0e-23 114.0 94 59.6
Duzib170G0585 Durio zibethinus HOM05D007207 ORTHO05D009041 3.0e-23 114.0 91 57.1
CANSAT54G0517 Cannabis sativa HOM05D007207 ORTHO05D009041 5.2e-23 113.2 89 58.4
Hund08142 Selenicereus undatus HOM05D007207 ORTHO05D009041 5.2e-23 113.2 128 49.2
Sed0024734 Sechium edule HOM05D007207 ORTHO05D009041 6.7e-23 112.8 151 42.4
Rhsim01G0217900 Rhododendron simsii HOM05D007207 ORTHO05D009041 1.2e-22 112.1 131 48.9
Manes.04G022800 Manihot esculenta HOM05D007207 ORTHO05D009041 2.6e-22 110.9 89 56.2
TWI75G1762 Tripterygium wilfordii HOM05D007207 ORTHO05D009041 3.3e-22 110.5 110 53.6
GSVIVG01025169001 Vitis vinifera HOM05D007207 ORTHO05D009041 7.5e-22 109.4 90 55.6
QL01p022653 Quercus lobata HOM05D007207 ORTHO05D009041 1.3e-21 108.6 102 51.0
Sc06g0010040 Simmondsia chinensis HOM05D007207 ORTHO05D009041 1.7e-21 108.2 102 53.9
Ciclev10030232m.g Citrus clementina HOM05D007207 ORTHO05D009041 3.7e-21 107.1 98 51.0
Duzib168G2405 Durio zibethinus HOM05D007207 ORTHO05D009041 3.7e-21 107.1 94 53.2
TPR.G17530 Trifolium pratense HOM05D007207 ORTHO05D009041 4.8e-21 106.7 88 59.1
Gohir.A07G117400 Gossypium hirsutum HOM05D007207 ORTHO05D009041 8.3e-21 105.9 94 53.2
QL01p022696 Quercus lobata HOM05D007207 ORTHO05D009041 8.3e-21 105.9 102 50.0
Thecc.09G257600 Theobroma cacao HOM05D007207 ORTHO05D009041 8.3e-21 105.9 89 55.1
PSO339G6489 Papaver somniferum HOM05D007207 ORTHO05D009041 1.1e-20 105.5 98 55.1
Lj3g0024872 Lotus japonicus HOM05D007207 ORTHO05D009041 1.4e-20 105.1 95 55.8
Medtr4g059710 Medicago truncatula HOM05D007207 ORTHO05D009041 1.4e-20 105.1 94 53.2
AUR62039621 Chenopodium quinoa HOM05D007207 ORTHO05D009041 1.8e-20 104.8 104 51.9
Gohir.D07G121800 Gossypium hirsutum HOM05D007207 ORTHO05D009041 3.1e-20 104.0 94 53.2
Gorai.001G131300 Gossypium raimondii HOM05D007207 ORTHO05D009041 3.1e-20 104.0 94 53.2
PSO063G2032 Papaver somniferum HOM05D007207 ORTHO05D009041 3.1e-20 104.0 98 54.1
PGR102G0648 Punica granatum HOM05D007207 ORTHO05D009041 3.1e-20 104.0 100 50.0
RcHm_v2.0_Chr5g0059711 Rosa chinensis HOM05D007207 ORTHO05D009041 3.1e-20 104.0 103 47.6
THA.LOC104815749 Tarenaya hassleriana HOM05D007207 ORTHO05D009041 4.1e-20 103.6 92 51.1
EL10Ac9g22498 Beta vulgaris HOM05D007207 ORTHO05D009041 7.0e-20 102.8 104 51.0
FvH4_3g32640 Fragaria vesca HOM05D007207 ORTHO05D009041 7.0e-20 102.8 131 38.9
FAN11G2184 Fragaria x ananassa HOM05D007207 ORTHO05D009041 7.0e-20 102.8 131 38.9
VMungo1127G1112 Vigna mungo HOM05D007207 ORTHO05D009041 1.6e-19 101.7 158 38.0
FAN25G0070 Fragaria x ananassa HOM05D007207 ORTHO05D009041 2.0e-19 101.3 165 35.2
Phvul.011G077500 Phaseolus vulgaris HOM05D007207 ORTHO05D009041 2.0e-19 101.3 167 39.5
Ah.01g015070 Amaranthus hybridus HOM05D007207 ORTHO05D009041 4.5e-19 100.1 119 45.4
Actinidia03739 Actinidia chinensis HOM05D007207 ORTHO05D009041 5.9e-19 99.8 113 53.1
FAN21G0351 Fragaria x ananassa HOM05D007207 ORTHO05D009041 5.9e-19 99.8 104 42.3
Glyma.12G069100 Glycine max HOM05D007207 ORTHO05D009041 5.9e-19 99.8 122 44.3
Potri.009G012300 Populus trichocarpa HOM05D007207 ORTHO05D009041 5.9e-19 99.8 132 43.9
CARHR007760 Cardamine hirsuta HOM05D007207 ORTHO05D009041 1.3e-18 98.6 169 34.9
arahy.Tifrunner.gnm1.ann1.F7CTDZ Arachis hypogaea HOM05D007207 ORTHO05D009041 1.7e-18 98.2 95 49.5
arahy.Tifrunner.gnm1.ann1.KZS5BJ Arachis hypogaea HOM05D007207 ORTHO05D009041 1.7e-18 98.2 95 49.5
BcaC07g42510 Brassica carinata HOM05D007207 ORTHO05D009041 3.8e-18 97.1 98 45.9
A09p66080 Brassica napus HOM05D007207 ORTHO05D009041 5.0e-18 96.7 98 46.9
TAR636G0495 Trochodendron aralioides HOM05D007207 ORTHO05D009041 6.5e-18 96.3 90 56.7
Oeu027462.1 Olea europaea HOM05D007207 ORTHO05D009041 8.5e-18 95.9 74 59.5
BcaB02g06697 Brassica carinata HOM05D007207 ORTHO05D009041 1.1e-17 95.5 94 46.8
MBI11_g23474_MAGBIO Magnolia biondii HOM05D007207 ORTHO05D009041 1.1e-17 95.5 94 50.0
Aa31LG2G9300 Aethionema arabicum HOM05D007207 ORTHO05D009041 1.9e-17 94.7 92 46.7
unitig_699.g19196 Utricularia gibba HOM05D007207 ORTHO05D009041 2.5e-17 94.4 78 55.1
MELO3C025765.2 Cucumis melo HOM05D007207 ORTHO05D009041 3.2e-17 94.0 150 36.7
AT1G07980 Arabidopsis thaliana HOM05D007207 ORTHO05D009041 4.2e-17 93.6 162 35.8
vmacro14446 Vaccinium macrocarpon HOM05D007207 ORTHO05D009041 5.5e-17 93.2 104 47.1
Thhalv10008787m.g Eutrema salsugineum HOM05D007207 ORTHO05D009041 7.2e-17 92.8 160 35.0
HPP92_012669 Vanilla planifolia HOM05D007207 ORTHO05D009041 9.4e-17 92.4 96 47.9
BolC5t29362H Brassica oleracea HOM05D007207 ORTHO05D009041 2.1e-16 91.3 95 47.4
BraA09t41946Z Brassica rapa HOM05D007207 ORTHO05D009041 2.1e-16 91.3 164 33.5
Migut.N02608 Erythranthe guttata HOM05D007207 ORTHO05D009041 2.1e-16 91.3 70 55.7
Lalb_Chr01g0004241 Lupinus albus HOM05D007207 ORTHO05D009041 2.7e-16 90.9 132 45.5
Carub.0001s0733 Capsella rubella HOM05D007207 ORTHO05D009041 3.6e-16 90.5 157 34.4
AL1G18310 Arabidopsis lyrata HOM05D007207 ORTHO05D009041 6.1e-16 89.7 134 37.3
A06p05070 Brassica napus HOM05D007207 ORTHO05D009041 6.1e-16 89.7 168 33.9
BraA06t23713Z Brassica rapa HOM05D007207 ORTHO05D009041 6.1e-16 89.7 168 33.9
Sp1g06610 Schrenkiella parvula HOM05D007207 ORTHO05D009041 8.0e-16 89.4 169 33.7
CDE06G2547 Ceratophyllum demersum HOM05D007207 ORTHO05D009041 4.0e-15 87.0 89 48.3
BcaC05g24714 Brassica carinata HOM05D007207 ORTHO05D009041 5.2e-15 86.7 157 33.8
C05p06030 Brassica napus HOM05D007207 ORTHO05D009041 5.2e-15 86.7 157 33.8
SEGI_13018 Sequoiadendron giganteum HOM05D007207 ORTHO05D009041 5.2e-15 86.7 93 48.4
CDE07G0349 Ceratophyllum demersum HOM05D007207 ORTHO05D009041 1.2e-14 85.5 91 45.1
Os03g0852300 Oryza sativa ssp. japonica HOM05D007207 ORTHO05D009041 1.5e-14 85.1 86 50.0
C08p50230 Brassica napus HOM05D007207 ORTHO05D009041 2.0e-14 84.7 160 31.2
BolC8t52552H Brassica oleracea HOM05D007207 ORTHO05D009041 2.0e-14 84.7 160 31.2
Atru.chr3.3663 Acer truncatum HOM05D007207 ORTHO05D009041 3.4e-14 84.0 125 38.4
Nitab4.5_0000181g0070 Nicotiana tabacum HOM05D038777 ORTHO05D049402 3.7e-13 80.5 77 76.6
ClCG02G021080 Citrullus lanatus HOM05D007207 ORTHO05D009041 6.3e-13 79.7 162 31.5
Duzib170G0223 Durio zibethinus HOM05D007207 ORTHO05D009041 8.3e-13 79.3 69 52.2
Nitab4.5_0003581g0040 Nicotiana tabacum HOM05D038777 ORTHO05D049402 8.3e-13 79.3 426 51.4
CsaV3_6G021790 Cucumis sativus L. HOM05D007207 ORTHO05D009041 1.4e-12 78.6 104 37.5
Sabra09G0008800 Salix brachista HOM05D007207 ORTHO05D009041 1.4e-12 78.6 144 36.8
Glyma.11G148000 Glycine max HOM05D007207 ORTHO05D009041 1.2e-11 75.5 122 38.5
AUR62024995 Chenopodium quinoa HOM05D007207 ORTHO05D009041 1.0e-10 72.4 62 56.5
Prupe.6G099600 Prunus persica HOM05D007207 ORTHO05D009041 1.7e-10 71.6 65 47.7
CBR_g30333 Chara braunii HOM05D000789 ORTHO05D000897 6.1e-08 63.2 90 38.9
Aa31LG8G12190 Aethionema arabicum HOM05D007207 ORTHO05D009041 1.8e-07 61.6 77 40.3
SHI06088 Sapria himalayana HOM05D007207 ORTHO05D009041 2.3e-07 61.2 70 44.3
AagrBONN_evm.TU.Sc2ySwM_228.2356 Anthoceros agrestis HOM05D007207 ORTHO05D009041 1.2e-06 58.9 103 35.0
Zm00001eb064730 Zea mays HOM05D007207 ORTHO05D009041 3.4e-06 57.4 86 39.5


User provided reference genes

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