Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G930.15 Capsicum annuum HOM05D003426 ORTHO05D003816 1.7e-88 329.3 172 100.0
PGSC0003DMG400011187 Solanum tuberosum HOM05D003426 ORTHO05D003816 1.9e-42 176.4 146 69.2
Sopen07g001810 Solanum pennellii HOM05D003426 ORTHO05D003816 4.2e-42 175.3 146 68.5
CAN.G160.49 Capsicum annuum HOM05D003426 ORTHO05D003816 5.5e-42 174.9 145 64.8
Solyc07g005700.3 Solanum lycopersicum HOM05D003426 ORTHO05D003816 4.3e-39 165.2 146 65.8
Peaxi162Scf00401g00417 Petunia axillaris HOM05D003426 ORTHO05D003816 4.0e-37 158.7 142 65.5
Nitab4.5_0005869g0090 Nicotiana tabacum HOM05D003426 ORTHO05D003816 7.2e-26 121.3 159 49.7
Nitab4.5_0001571g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 1.6e-25 120.2 159 50.3
PGSC0003DMG400011188 Solanum tuberosum HOM05D003426 ORTHO05D003816 6.9e-21 104.8 122 55.7
Sopen07g001820 Solanum pennellii HOM05D003426 ORTHO05D003816 3.4e-20 102.4 107 61.7
CAN.G930.16 Capsicum annuum HOM05D003426 ORTHO05D043420 5.5e-18 95.1 68 75.0
Oeu026460.1 Olea europaea HOM05D003426 ORTHO05D003816 1.3e-11 73.9 157 37.6
Solyc07g005710.3 Solanum lycopersicum HOM05D003426 ORTHO05D003816 2.9e-11 72.8 92 53.3
CSS0027727 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 1.9e-10 70.1 144 38.9
Lj9C718T11 Lonicera japonica HOM05D003426 ORTHO05D003816 3.0e-08 62.8 121 41.3
AUR62025323 Chenopodium quinoa HOM05D003426 ORTHO05D003816 6.7e-08 61.6 129 38.0
AUR62028339 Chenopodium quinoa HOM05D003426 ORTHO05D003816 6.7e-08 61.6 129 38.0
TAR626G1511 Trochodendron aralioides HOM05D003426 ORTHO05D003816 1.5e-07 60.5 131 35.1
Nitab4.5_0007354g0010 Nicotiana tabacum HOM05D003426 ORTHO05D003816 2.6e-07 59.7 112 46.4
TAR636G1172 Trochodendron aralioides HOM05D003426 ORTHO05D003816 2.6e-07 59.7 125 36.8
Hma1.2p1_0028F.1_g017630 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 3.3e-07 59.3 108 39.8
MSTRG.26266 Avicennia marina HOM05D003426 ORTHO05D003816 4.4e-07 58.9 139 35.3
Cc06_g14810 Coffea canephora HOM05D003426 ORTHO05D003816 5.7e-07 58.5 118 43.2
Actinidia38316 Actinidia chinensis HOM05D003426 ORTHO05D003816 4.8e-06 55.5 141 34.0
HanXRQChr05g0144001 Helianthus annuus HOM05D003426 ORTHO05D003816 6.3e-06 55.1 46 65.2


User provided reference genes

Program Settings