Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G93.8 Capsicum annuum HOM05D000588 ORTHO05D004275 9.0e-37 156.4 77 100.0
CAN.G394.55 Capsicum annuum HOM05D000588 ORTHO05D004275 1.6e-25 119.0 66 90.9
Nitab4.5_0006166g0020 Nicotiana tabacum HOM05D000588 ORTHO05D004275 7.9e-25 116.7 66 89.4
Sopen06g032520 Solanum pennellii HOM05D000588 ORTHO05D004275 7.9e-25 116.7 66 89.4
PGSC0003DMG400030411 Solanum tuberosum HOM05D000588 ORTHO05D004275 7.9e-25 116.7 66 89.4
Nitab4.5_0003753g0010 Nicotiana tabacum HOM05D000588 ORTHO05D004275 1.5e-23 112.5 62 90.3
Nitab4.5_0000514g0120 Nicotiana tabacum HOM05D000588 ORTHO05D004275 1.9e-23 112.1 65 84.6
Nitab4.5_0002403g0050 Nicotiana tabacum HOM05D000588 ORTHO05D004275 1.9e-23 112.1 65 84.6
Peaxi162Scf00774g00007 Petunia axillaris HOM05D000588 ORTHO05D004275 1.9e-23 112.1 68 82.4
Cc01_g12820 Coffea canephora HOM05D000588 ORTHO05D004275 1.4e-21 105.9 62 83.9
Nn2g10372 Nelumbo nucifera HOM05D000588 ORTHO05D004275 1.8e-21 105.5 69 73.9
Sed0018795 Sechium edule HOM05D000588 ORTHO05D004275 2.4e-21 105.1 66 78.8
CAN.G1305.32 Capsicum annuum HOM05D000588 ORTHO05D004275 3.1e-21 104.8 70 75.7
Nn5g26920 Nelumbo nucifera HOM05D000588 ORTHO05D004275 4.1e-21 104.4 69 72.5
RcHm_v2.0_Chr5g0064411 Rosa chinensis HOM05D000588 ORTHO05D004275 4.1e-21 104.4 65 80.0
Actinidia37205 Actinidia chinensis HOM05D000588 ORTHO05D004275 5.3e-21 104.0 65 76.9
FAN16G3196 Fragaria x ananassa HOM05D000588 ORTHO05D004275 5.3e-21 104.0 65 80.0
FAN21G1353 Fragaria x ananassa HOM05D000588 ORTHO05D004275 5.3e-21 104.0 65 80.0
FAN25G0853 Fragaria x ananassa HOM05D000588 ORTHO05D004275 5.3e-21 104.0 65 80.0
Thecc.09G322200 Theobroma cacao HOM05D000588 ORTHO05D004275 6.9e-21 103.6 64 78.1
Actinidia23942 Actinidia chinensis HOM05D000588 ORTHO05D004275 9.0e-21 103.2 65 76.9
CSS0007929 Camellia sinensis var. sinensis HOM05D000588 ORTHO05D004275 9.0e-21 103.2 65 76.9
ClCG03G001570 Citrullus lanatus HOM05D000588 ORTHO05D004275 9.0e-21 103.2 65 78.5
CsaV3_1G034110 Cucumis sativus L. HOM05D000588 ORTHO05D004275 9.0e-21 103.2 65 78.5
ECA236G3501 Erigeron canadensis HOM05D000588 ORTHO05D004275 9.0e-21 103.2 65 75.4
Lsat_1_v5_gn_8_73140 Lactuca sativa HOM05D000588 ORTHO05D004275 9.0e-21 103.2 65 76.9
MELO3C020643.2 Cucumis melo HOM05D000588 ORTHO05D004275 1.2e-20 102.8 65 78.5
Ciclev10028444m.g Citrus clementina HOM05D000588 ORTHO05D004275 1.5e-20 102.4 65 78.5
FAN11G0300 Fragaria x ananassa HOM05D000588 ORTHO05D004275 1.5e-20 102.4 65 78.5
Prupe.6G078300 Prunus persica HOM05D000588 ORTHO05D004275 1.5e-20 102.4 65 78.5
THA.LOC104815792 Tarenaya hassleriana HOM05D000588 ORTHO05D004275 1.5e-20 102.4 69 72.5
Dinv16996 Davidia involucrata HOM05D000588 ORTHO05D004275 2.0e-20 102.1 65 76.9
Dinv42945 Davidia involucrata HOM05D000588 ORTHO05D004275 2.0e-20 102.1 65 76.9
Dinv43155 Davidia involucrata HOM05D000588 ORTHO05D004275 2.0e-20 102.1 65 76.9
COL.COLO4_18502 Corchorus olitorius HOM05D000588 ORTHO05D004275 2.6e-20 101.7 64 78.1
Duzib170G0065 Durio zibethinus HOM05D000588 ORTHO05D004275 2.6e-20 101.7 64 78.1
Gorai.001G110500 Gossypium raimondii HOM05D000588 ORTHO05D004275 2.6e-20 101.7 64 76.6
Gohir.A07G098300 Gossypium hirsutum HOM05D000588 ORTHO05D004275 3.4e-20 101.3 64 76.6
Gohir.D07G102600 Gossypium hirsutum HOM05D000588 ORTHO05D004275 3.4e-20 101.3 64 76.6
QL01p032133 Quercus lobata HOM05D000588 ORTHO05D004275 3.4e-20 101.3 64 78.1
Duzib168G2354 Durio zibethinus HOM05D000588 ORTHO05D004275 4.5e-20 100.9 64 78.1
Lj1P154T18 Lonicera japonica HOM05D000588 ORTHO05D004275 4.5e-20 100.9 65 75.4
Sopen03g031960 Solanum pennellii HOM05D000588 ORTHO05D004275 4.5e-20 100.9 70 70.0
PGSC0003DMG400018093 Solanum tuberosum HOM05D000588 ORTHO05D004275 4.5e-20 100.9 70 70.0
Atru.chr3.3897 Acer truncatum HOM05D000588 ORTHO05D004275 5.9e-20 100.5 65 76.9
Solyc03g112880.1 Solanum lycopersicum HOM05D000588 ORTHO05D004275 5.9e-20 100.5 70 70.0
TAR633G2704 Trochodendron aralioides HOM05D000588 ORTHO05D004275 5.9e-20 100.5 65 73.8
MSTRG.21200 Avicennia marina HOM05D000588 ORTHO05D004275 7.6e-20 100.1 62 79.0
MSTRG.18582 Avicennia marina HOM05D000588 ORTHO05D004275 1.0e-19 99.8 62 77.4
TAR625G0646 Trochodendron aralioides HOM05D000588 ORTHO05D004275 1.0e-19 99.8 69 71.0
Migut.N02676 Erythranthe guttata HOM05D000588 ORTHO05D004275 1.3e-19 99.4 62 79.0
FvH4_3g36000 Fragaria vesca HOM05D000588 ORTHO05D004275 1.3e-19 99.4 65 76.9
CANSAT21G2213 Cannabis sativa HOM05D000588 ORTHO05D004275 1.7e-19 99.0 65 75.4
Sabra18G0084200 Salix brachista HOM05D000588 ORTHO05D004275 1.7e-19 99.0 72 69.4
Gohir.D03G125900 Gossypium hirsutum HOM05D000588 ORTHO05D004275 2.2e-19 98.6 64 75.0
Gorai.003G132100 Gossypium raimondii HOM05D000588 ORTHO05D004275 2.2e-19 98.6 64 75.0
HanXRQChr05g0134901 Helianthus annuus HOM05D000588 ORTHO05D004275 2.2e-19 98.6 65 72.3
Oeu019197.1 Olea europaea HOM05D000588 ORTHO05D004275 2.9e-19 98.2 62 77.4
Haze_24091 Corylus avellana HOM05D000588 ORTHO05D004275 3.8e-19 97.8 64 76.6
Hma1.2p1_0418F.1_g149060 Hydrangea macrophylla HOM05D000588 ORTHO05D004275 3.8e-19 97.8 65 76.9
Lalb_Chr20g0114361 Lupinus albus HOM05D000588 ORTHO05D004275 3.8e-19 97.8 65 72.3
Dinv12419 Davidia involucrata HOM05D000588 ORTHO05D004275 5.0e-19 97.4 61 78.7
Manes.11G130800 Manihot esculenta HOM05D000588 ORTHO05D004275 5.0e-19 97.4 65 75.4
Potri.018G097000 Populus trichocarpa HOM05D000588 ORTHO05D004275 5.0e-19 97.4 72 68.1
Lsat_1_v5_gn_9_23341 Lactuca sativa HOM05D000588 ORTHO05D004275 6.5e-19 97.1 65 70.8
Cpa.g.sc1351.1 Carica papaya HOM05D000588 ORTHO05D004275 1.1e-18 96.3 65 72.3
Cfa011497 Carpinus fangiana HOM05D000588 ORTHO05D004275 1.1e-18 96.3 64 75.0
TAR623G0371 Trochodendron aralioides HOM05D000588 ORTHO05D004275 1.1e-18 96.3 69 68.1
unitig_736.g22965 Utricularia gibba HOM05D000588 ORTHO05D004275 1.1e-18 96.3 62 72.6
CiPaw.14G068600 Carya illinoinensis HOM05D000588 ORTHO05D004275 1.9e-18 95.5 64 75.0
CDE07G0122 Ceratophyllum demersum HOM05D000588 ORTHO05D004275 1.9e-18 95.5 78 62.8
Manes.04G034700 Manihot esculenta HOM05D000588 ORTHO05D004275 1.9e-18 95.5 65 70.8
Potri.006G174900 Populus trichocarpa HOM05D000588 ORTHO05D004275 1.9e-18 95.5 72 65.3
SalBow3G2904 Salvia bowleyana HOM05D000588 ORTHO05D004275 1.9e-18 95.5 62 75.8
MSTRG.12648 Avicennia marina HOM05D000588 ORTHO05D004275 2.5e-18 95.1 62 74.2
CDE04G3587 Ceratophyllum demersum HOM05D000588 ORTHO05D004275 2.5e-18 95.1 78 62.8
Eucgr.B02370 Eucalyptus grandis HOM05D000588 ORTHO05D004275 2.5e-18 95.1 65 72.3
CiPaw.13G094900 Carya illinoinensis HOM05D000588 ORTHO05D004275 3.2e-18 94.7 62 74.2
Rhsim01G0227300 Rhododendron simsii HOM05D000588 ORTHO05D004275 4.2e-18 94.4 66 71.2
HanXRQChr11g0350861 Helianthus annuus HOM05D000588 ORTHO05D004275 5.5e-18 94.0 65 67.7
MD11G1109900 Malus domestica HOM05D000588 ORTHO05D004275 5.5e-18 94.0 61 75.4
SalBow2G2620 Salvia bowleyana HOM05D000588 ORTHO05D004275 5.5e-18 94.0 62 72.6
unitig_90.g27565 Utricularia gibba HOM05D000588 ORTHO05D004275 5.5e-18 94.0 62 71.0
Ah.08g219490 Amaranthus hybridus HOM05D000588 ORTHO05D004275 1.2e-17 92.8 66 72.7
EL10Ac7g16014 Beta vulgaris HOM05D000588 ORTHO05D004275 1.2e-17 92.8 66 72.7
Migut.D02106 Erythranthe guttata HOM05D002226 ORTHO05D004275 1.2e-17 92.8 63 74.6
Phvul.009G244800 Phaseolus vulgaris HOM05D000588 ORTHO05D004275 1.6e-17 92.4 65 70.8
VMungo1309G0153 Vigna mungo HOM05D000588 ORTHO05D004275 1.6e-17 92.4 65 70.8
Psat1g151360 Pisum sativum HOM05D000588 ORTHO05D004275 2.1e-17 92.0 65 67.7
Lalb_Chr15g0083661 Lupinus albus HOM05D000588 ORTHO05D004275 2.7e-17 91.7 65 67.7
SGA_v2.0_scaffold61G21286 Striga asiatica HOM05D000588 ORTHO05D004275 2.7e-17 91.7 62 72.6
TWI79G0909 Tripterygium wilfordii HOM05D000588 ORTHO05D004275 2.7e-17 91.7 65 69.2
Medtr2g437700 Medicago truncatula HOM05D000588 ORTHO05D004275 3.6e-17 91.3 65 67.7
Oeu054146.1 Olea europaea HOM05D000588 ORTHO05D004275 4.6e-17 90.9 62 72.6
Ca_02403_v3 Cicer arietinum L. HOM05D000588 ORTHO05D004275 7.9e-17 90.1 65 66.2
PGR102G2795 Punica granatum HOM05D000588 ORTHO05D004275 7.9e-17 90.1 65 70.8
Ah.15g097240 Amaranthus hybridus HOM05D000588 ORTHO05D004275 1.3e-16 89.4 66 68.2
arahy.Tifrunner.gnm1.ann1.42PK2U Arachis hypogaea HOM05D000588 ORTHO05D004275 1.3e-16 89.4 65 67.7
arahy.Tifrunner.gnm1.ann1.60SBBK Arachis hypogaea HOM05D000588 ORTHO05D004275 1.3e-16 89.4 65 67.7
TWI31G1202 Tripterygium wilfordii HOM05D000588 ORTHO05D004275 1.3e-16 89.4 65 67.7
AUR62001791 Chenopodium quinoa HOM05D000588 ORTHO05D004275 1.8e-16 89.0 62 74.2
AUR62009579 Chenopodium quinoa HOM05D000588 ORTHO05D004275 1.8e-16 89.0 62 74.2
Lj2A1062T47 Lonicera japonica HOM05D000588 ORTHO05D004275 2.3e-16 88.6 62 69.4
Glyma.15G155400 Glycine max HOM05D000588 ORTHO05D004275 3.0e-16 88.2 65 66.2
SGA_v2.0_scaffold203G41509 Striga asiatica HOM05D000588 ORTHO05D004275 3.0e-16 88.2 62 69.4
Lj6g0012231 Lotus japonicus HOM05D000588 ORTHO05D004275 3.9e-16 87.8 65 66.2
PSO339G2986 Papaver somniferum HOM05D000588 ORTHO05D004275 3.9e-16 87.8 65 66.2
PSO384G2134 Papaver somniferum HOM05D000588 ORTHO05D004275 3.9e-16 87.8 65 66.2
Sc21g0005760 Simmondsia chinensis HOM05D000588 ORTHO05D004275 1.1e-15 86.3 67 65.7
DCAR_005327 Daucus carota HOM05D000588 ORTHO05D004275 1.5e-15 85.9 62 62.9
MBI05_g22049_MAGBIO Magnolia biondii HOM05D000588 ORTHO05D004275 3.3e-15 84.7 68 63.2
TPR.G30928 Trifolium pratense HOM05D000588 ORTHO05D004275 1.6e-14 82.4 65 58.5
DCAR_015624 Daucus carota HOM05D000588 ORTHO05D004275 2.8e-14 81.6 62 61.3
GSVIVG01024973001 Vitis vinifera HOM05D000588 ORTHO05D004275 6.3e-14 80.5 47 85.1
TWI75G0139 Tripterygium wilfordii HOM05D000588 ORTHO05D004275 8.2e-14 80.1 65 61.5
Zm00001eb148360 Zea mays HOM05D000588 ORTHO05D004275 1.8e-13 79.0 65 60.0
Os05g0459700 Oryza sativa ssp. japonica HOM05D000588 ORTHO05D004275 2.4e-13 78.6 65 60.0
Sp5g15140 Schrenkiella parvula HOM05D000588 ORTHO05D004275 4.1e-13 77.8 59 61.0
Zm00001eb289670 Zea mays HOM05D000588 ORTHO05D004275 5.3e-13 77.4 65 58.5
BcaB01g01009 Brassica carinata HOM05D000588 ORTHO05D004275 2.0e-12 75.5 63 55.6
Zm00001eb367960 Zea mays HOM05D000588 ORTHO05D004275 2.0e-12 75.5 65 58.5
Aa31LG4G15550 Aethionema arabicum HOM05D000588 ORTHO05D004275 2.6e-12 75.1 55 63.6
CARHR155250 Cardamine hirsuta HOM05D000588 ORTHO05D004275 2.6e-12 75.1 55 63.6
Thhalv10002543m.g Eutrema salsugineum HOM05D000588 ORTHO05D004275 2.6e-12 75.1 55 63.6
Lalb_Chr18g0051931 Lupinus albus HOM05D000588 ORTHO05D004275 2.6e-12 75.1 54 64.8
A06p20870 Brassica napus HOM05D000588 ORTHO05D004275 4.5e-12 74.3 59 57.6
C03p70730 Brassica napus HOM05D000588 ORTHO05D004275 4.5e-12 74.3 59 57.6
BolC3t19345H Brassica oleracea HOM05D000588 ORTHO05D004275 4.5e-12 74.3 59 57.6
BraA06t25168Z Brassica rapa HOM05D000588 ORTHO05D004275 1.0e-11 73.2 59 55.9
AL5G25410 Arabidopsis lyrata HOM05D000588 ORTHO05D004275 1.7e-11 72.4 54 63.0
AT3G46550 Arabidopsis thaliana HOM05D000588 ORTHO05D004275 1.7e-11 72.4 54 63.0
CSS0046782 Camellia sinensis var. sinensis HOM05D000588 ORTHO05D004275 1.7e-11 72.4 44 79.5
Os01g0841100 Oryza sativa ssp. japonica HOM05D000588 ORTHO05D004275 1.7e-11 72.4 65 55.4
THA.LOC104799443 Tarenaya hassleriana HOM05D000588 ORTHO05D004275 1.7e-11 72.4 55 61.8
THA.LOC104810781 Tarenaya hassleriana HOM05D000588 ORTHO05D004275 2.2e-11 72.0 71 54.9
BcaC01g01907 Brassica carinata HOM05D000588 ORTHO05D004275 3.8e-11 71.2 59 55.9
Carub.0005s1282 Capsella rubella HOM05D000588 ORTHO05D004275 8.5e-11 70.1 52 63.5
SHI05949 Sapria himalayana HOM05D000588 ORTHO05D004275 6.1e-09 63.9 64 48.4
SEGI_38266 Sequoiadendron giganteum HOM05D000588 ORTHO05D004275 1.0e-08 63.2 74 39.2
Actinidia08683 Actinidia chinensis HOM05D000588 ORTHO05D004275 6.7e-08 60.5 50 64.0
ATR0665G173 Amborella trichopoda HOM05D000588 ORTHO05D004275 9.7e-07 56.6 69 44.9
SEGI_34657 Sequoiadendron giganteum HOM05D000588 ORTHO05D004275 9.7e-07 56.6 75 37.3


User provided reference genes

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