Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G93.47 Capsicum annuum HOM05D006288 ORTHO05D007416 7.2e-46 187.2 116 100.0
PGSC0003DMG400026550 Solanum tuberosum HOM05D006288 ORTHO05D007416 1.7e-39 166.0 114 77.2
Solyc02g065690.3 Solanum lycopersicum HOM05D006288 ORTHO05D007416 6.5e-39 164.1 114 76.3
Sopen02g015910 Solanum pennellii HOM05D006288 ORTHO05D007416 6.5e-39 164.1 114 76.3
Nitab4.5_0003203g0060 Nicotiana tabacum HOM05D006288 ORTHO05D007416 7.2e-38 160.6 111 76.6
Peaxi162Scf00019g00316 Petunia axillaris HOM05D006288 ORTHO05D007416 3.6e-37 158.3 112 74.1
Migut.K00879 Erythranthe guttata HOM05D006288 ORTHO05D007416 7.4e-35 150.6 112 69.6
vmacro18118 Vaccinium macrocarpon HOM05D006288 ORTHO05D007416 1.7e-34 149.4 113 67.3
Cc07_g04640 Coffea canephora HOM05D006288 ORTHO05D007416 3.7e-34 148.3 114 67.5
Rhsim10G0068900 Rhododendron simsii HOM05D006288 ORTHO05D007416 3.7e-34 148.3 113 66.4
Dinv34894 Davidia involucrata HOM05D006288 ORTHO05D007416 4.8e-34 147.9 113 68.1
Oeu007090.1 Olea europaea HOM05D006288 ORTHO05D007416 4.8e-34 147.9 113 67.3
Duzib133G0644 Durio zibethinus HOM05D006288 ORTHO05D007416 6.3e-34 147.5 115 66.1
Duzib133G1254 Durio zibethinus HOM05D006288 ORTHO05D007416 6.3e-34 147.5 115 66.1
Gohir.D12G056100 Gossypium hirsutum HOM05D006288 ORTHO05D007416 1.1e-33 146.7 115 66.1
Gorai.008G059200 Gossypium raimondii HOM05D006288 ORTHO05D007416 1.1e-33 146.7 115 66.1
Hma1.2p1_0304F.1_g119265 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.4e-33 146.4 112 67.9
Hma1.2p1_0304F.1_g119270 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.4e-33 146.4 112 67.9
SGA_v2.0_scaffold30G12393 Striga asiatica HOM05D006288 ORTHO05D007416 1.4e-33 146.4 113 64.6
GSVIVG01036516001 Vitis vinifera HOM05D006288 ORTHO05D007416 1.8e-33 146.0 113 65.5
Rhsim08G0078400 Rhododendron simsii HOM05D006288 ORTHO05D007416 3.1e-33 145.2 113 65.5
Thecc.10G108100 Theobroma cacao HOM05D005170 ORTHO05D007416 3.1e-33 145.2 116 65.5
CSS0015874 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 5.3e-33 144.4 113 63.7
CSS0028097 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 5.3e-33 144.4 113 63.7
Gohir.A12G056700 Gossypium hirsutum HOM05D006288 ORTHO05D007416 5.3e-33 144.4 115 65.2
Manes.01G106000 Manihot esculenta HOM05D006288 ORTHO05D007416 5.3e-33 144.4 114 64.9
TAR629G2245 Trochodendron aralioides HOM05D006288 ORTHO05D007416 1.2e-32 143.3 112 67.0
Cfa007713 Carpinus fangiana HOM05D006288 ORTHO05D007416 2.6e-32 142.1 114 65.8
PSO210G6985 Papaver somniferum HOM05D006288 ORTHO05D007416 4.5e-32 141.4 113 64.6
PSO675G0562 Papaver somniferum HOM05D006288 ORTHO05D007416 7.7e-32 140.6 113 65.5
PSO832G2920 Papaver somniferum HOM05D006288 ORTHO05D007416 1.0e-31 140.2 113 64.6
CSS0016762 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 3.8e-31 138.3 115 62.6
CSS0047986 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 3.8e-31 138.3 115 62.6
Nn4g23570 Nelumbo nucifera HOM05D006288 ORTHO05D007416 3.8e-31 138.3 112 80.4
Cpa.g.sc14.255 Carica papaya HOM05D006288 ORTHO05D007416 6.5e-31 137.5 116 62.9
SalBow7G0779 Salvia bowleyana HOM05D006288 ORTHO05D007416 6.5e-31 137.5 112 64.3
CSS0029131 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 1.5e-30 136.3 113 61.1
Prupe.3G247000 Prunus persica HOM05D006288 ORTHO05D007416 1.5e-30 136.3 114 62.3
PGR004G0851 Punica granatum HOM05D006288 ORTHO05D007416 1.5e-30 136.3 112 63.4
PSO541G1058 Papaver somniferum HOM05D006288 ORTHO05D007416 1.9e-30 136.0 113 62.8
CiPaw.03G081300 Carya illinoinensis HOM05D006288 ORTHO05D007416 2.5e-30 135.6 114 64.0
Hund16253 Selenicereus undatus HOM05D006288 ORTHO05D007416 4.2e-30 134.8 113 60.2
Actinidia26277 Actinidia chinensis HOM05D006288 ORTHO05D007416 7.2e-30 134.0 112 75.9
Glyma.13G051400 Glycine max HOM05D006288 ORTHO05D007416 7.2e-30 134.0 109 63.3
TWI60G1717 Tripterygium wilfordii HOM05D006288 ORTHO05D007416 7.2e-30 134.0 110 62.7
Glyma.19G037000 Glycine max HOM05D006288 ORTHO05D007416 9.4e-30 133.7 109 63.3
Lalb_Chr21g0318141 Lupinus albus HOM05D006288 ORTHO05D007416 2.1e-29 132.5 117 59.0
Atru.chr8.595 Acer truncatum HOM05D006288 ORTHO05D007416 2.7e-29 132.1 113 58.4
MD09G1077100 Malus domestica HOM05D006288 ORTHO05D007416 2.7e-29 132.1 114 59.6
ATR0691G027 Amborella trichopoda HOM05D006288 ORTHO05D007416 3.6e-29 131.7 113 60.2
Psat5g210920 Pisum sativum HOM05D006288 ORTHO05D007416 3.6e-29 131.7 114 60.5
RcHm_v2.0_Chr2g0164421 Rosa chinensis HOM05D006288 ORTHO05D007416 3.6e-29 131.7 113 60.2
Ca_13697_v3 Cicer arietinum L. HOM05D006288 ORTHO05D007416 6.1e-29 131.0 109 62.4
Ah.16g100880 Amaranthus hybridus HOM05D006288 ORTHO05D007416 8.0e-29 130.6 112 59.8
Psat5g210840 Pisum sativum HOM05D006288 ORTHO05D007416 1.0e-28 130.2 114 59.6
FAN14G1171 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.4e-28 129.8 112 75.0
Lj3g0015520 Lotus japonicus HOM05D006288 ORTHO05D007416 1.4e-28 129.8 110 60.9
TPR.G14566 Trifolium pratense HOM05D006288 ORTHO05D007416 1.4e-28 129.8 114 59.6
MD17G1067500 Malus domestica HOM05D006288 ORTHO05D007416 1.8e-28 129.4 112 58.9
Medtr3g034300 Medicago truncatula HOM05D006288 ORTHO05D007416 3.0e-28 128.6 114 58.8
arahy.Tifrunner.gnm1.ann1.J0I6JM Arachis hypogaea HOM05D006288 ORTHO05D007416 3.9e-28 128.3 117 57.3
Sc11g0008960 Simmondsia chinensis HOM05D006288 ORTHO05D007416 5.2e-28 127.9 114 57.9
THA.LOC104805112 Tarenaya hassleriana HOM05D006288 ORTHO05D007416 6.7e-28 127.5 110 59.1
Manes.02G062500 Manihot esculenta HOM05D006288 ORTHO05D007416 1.1e-27 126.7 108 61.1
Phvul.004G044700 Phaseolus vulgaris HOM05D006288 ORTHO05D007416 1.5e-27 126.3 108 60.2
Lsat_1_v5_gn_4_174040 Lactuca sativa HOM05D006288 ORTHO05D007416 2.6e-27 125.6 112 57.1
Potri.017G106200 Populus trichocarpa HOM05D006288 ORTHO05D007416 2.6e-27 125.6 118 71.2
Lsat_1_v5_gn_4_173980 Lactuca sativa HOM05D006288 ORTHO05D007416 3.3e-27 125.2 112 71.4
EL10Ac2g04409 Beta vulgaris HOM05D006288 ORTHO05D007416 4.4e-27 124.8 113 62.8
Eucgr.F02878 Eucalyptus grandis HOM05D006288 ORTHO05D007416 5.7e-27 124.4 110 60.0
VMungo0464G1523 Vigna mungo HOM05D006288 ORTHO05D007416 5.7e-27 124.4 109 58.7
Psat5g212400 Pisum sativum HOM05D006288 ORTHO05D007416 9.7e-27 123.6 110 58.2
QL09p029462 Quercus lobata HOM05D006288 ORTHO05D007416 9.7e-27 123.6 110 59.1
Os02g0190900 Oryza sativa ssp. japonica HOM05D006288 ORTHO05D007416 2.8e-26 122.1 112 57.1
ECA232G4388 Erigeron canadensis HOM05D006288 ORTHO05D007416 8.2e-26 120.6 111 71.2
CANSAT64G2264 Cannabis sativa HOM05D005170 ORTHO05D007416 1.1e-25 120.2 106 58.5
AUR62023135 Chenopodium quinoa HOM05D006288 ORTHO05D007416 1.4e-25 119.8 112 58.9
Sabra17G0089200 Salix brachista HOM05D006288 ORTHO05D007416 3.1e-25 118.6 83 69.9
SEGI_23755 Sequoiadendron giganteum HOM05D006288 ORTHO05D007416 3.1e-25 118.6 109 55.0
FAN10G3625 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.6e-24 116.3 82 72.0
Zm00001eb234970 Zea mays HOM05D006288 ORTHO05D007416 1.6e-24 116.3 110 52.7
CsaV3_4G009920 Cucumis sativus L. HOM05D006288 ORTHO05D007416 2.0e-24 115.9 114 53.5
Carub.0008s0943 Capsella rubella HOM05D006288 ORTHO05D007416 3.5e-24 115.2 112 63.4
CDE10G0042 Ceratophyllum demersum HOM05D006288 ORTHO05D007416 4.5e-24 114.8 81 67.9
Actinidia17612 Actinidia chinensis HOM05D006288 ORTHO05D007416 7.7e-24 114.0 80 73.8
MELO3C018910.2 Cucumis melo HOM05D006288 ORTHO05D007416 1.0e-23 113.6 114 67.5
HPP92_018391 Vanilla planifolia HOM05D006288 ORTHO05D007416 1.3e-23 113.2 109 53.2
ClCG07G016140 Citrullus lanatus HOM05D006288 ORTHO05D007416 1.7e-23 112.8 114 67.5
TAR371G0310 Trochodendron aralioides HOM05D006288 ORTHO05D007416 1.7e-23 112.8 82 67.1
unitig_32.g10759 Utricularia gibba HOM05D006288 ORTHO05D007416 3.8e-23 111.7 112 50.9
Nitab4.5_0002249g0090 Nicotiana tabacum HOM05D006288 ORTHO05D007416 5.0e-23 111.3 76 76.3
FAN10G2886 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.9e-22 109.4 83 66.3
Sed0021882 Sechium edule HOM05D006288 ORTHO05D007416 2.5e-22 109.0 79 68.4
Aa31LG7G12050 Aethionema arabicum HOM05D006288 ORTHO05D007416 4.2e-22 108.2 110 61.8
FAN02G0987 Fragaria x ananassa HOM05D006288 ORTHO05D007416 5.5e-22 107.8 112 68.8
FAN09G1057 Fragaria x ananassa HOM05D010582 ORTHO05D007416 5.5e-22 107.8 112 68.8
C07p39960 Brassica napus HOM05D006288 ORTHO05D007416 1.2e-21 106.7 104 51.9
BolC7t44529H Brassica oleracea HOM05D006288 ORTHO05D007416 1.2e-21 106.7 104 51.0
HanXRQChr15g0464891 Helianthus annuus HOM05D006288 ORTHO05D007416 1.2e-21 106.7 93 76.3
BraA06t26742Z Brassica rapa HOM05D006288 ORTHO05D007416 1.6e-21 106.3 81 64.2
FAN05G5526 Fragaria x ananassa HOM05D006288 ORTHO05D007416 4.7e-21 104.8 73 72.6
Atru.BG.156.p Acer truncatum HOM05D006288 ORTHO05D007416 1.0e-20 103.6 94 54.3
AL8G23340 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 2.3e-20 102.4 112 62.5
CARHR287980 Cardamine hirsuta HOM05D006288 ORTHO05D007416 8.8e-20 100.5 110 62.7
AT5G49550 Arabidopsis thaliana HOM05D006288 ORTHO05D007416 2.0e-19 99.4 112 61.6
Thhalv10005135m.g Eutrema salsugineum HOM05D006288 ORTHO05D007416 2.6e-19 99.0 76 63.2
AL954U10010 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 3.4e-19 98.6 110 61.8
A09p04890 Brassica napus HOM05D006288 ORTHO05D007416 9.7e-19 97.1 73 65.8
BraA09t36127Z Brassica rapa HOM05D006288 ORTHO05D007416 9.7e-19 97.1 73 65.8
Sp2g19860 Schrenkiella parvula HOM05D006288 ORTHO05D007416 9.7e-19 97.1 71 66.2
BcaC04g23731 Brassica carinata HOM05D006288 ORTHO05D007416 2.2e-18 95.9 71 66.2
C09p05280 Brassica napus HOM05D006288 ORTHO05D007416 2.2e-18 95.9 71 66.2
FvH4_6g46100 Fragaria vesca HOM05D006288 ORTHO05D007416 2.2e-18 95.9 67 73.1
COL.COLO4_00228 Corchorus olitorius HOM05D006288 ORTHO05D007416 3.7e-18 95.1 77 63.6
Hma1.2p1_2186F.1_g316383 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 3.7e-18 95.1 76 63.2
Hma1.2p1_3488F.1_g336360 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 3.7e-18 95.1 76 63.2
BcaB04g19620 Brassica carinata HOM05D006288 ORTHO05D007416 4.8e-18 94.7 73 63.0
DCAR_011002 Daucus carota HOM05D006288 ORTHO05D007416 6.3e-18 94.4 78 61.5
FvH4_6g24710 Fragaria vesca HOM05D006288 ORTHO05D007416 1.1e-17 93.6 59 78.0
FAN14G4004 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.1e-17 93.6 59 78.0
SHI46878 Sapria himalayana HOM05D006288 ORTHO05D007416 2.4e-17 92.4 73 54.8
Eucgr.K01979 Eucalyptus grandis HOM05D006288 ORTHO05D007416 1.5e-14 83.2 81 60.5
Pp3c21_3840 Physcomitrium patens HOM05D006288 ORTHO05D007416 5.5e-14 81.3 78 51.3
AagrBONN_evm.TU.Sc2ySwM_344.2644 Anthoceros agrestis HOM05D006288 ORTHO05D007416 6.8e-12 74.3 106 35.8
Mapoly0015s0174 Marchantia polymorpha HOM05D006288 ORTHO05D007416 8.8e-12 73.9 79 43.0
Psat6g174640 Pisum sativum HOM05D006288 ORTHO05D007416 4.4e-11 71.6 45 73.3
Haze_03283 Corylus avellana HOM05D002280 ORTHO05D002322 6.3e-10 67.8 43 79.1
SMO358G0122 Selaginella moellendorffii HOM05D006288 ORTHO05D007416 2.9e-07 58.9 100 31.0


User provided reference genes

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