Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G93.14 Capsicum annuum HOM05D009662 ORTHO05D003353 1.9e-113 412.5 215 100.0
CAN.G2125.2 Capsicum annuum HOM05D000943 ORTHO05D010024 1.5e-28 130.6 85 83.5
Sopen01g045990 Solanum pennellii HOM05D000943 ORTHO05D010024 7.3e-28 128.3 85 80.0
Solyc01g103620.4 Solanum lycopersicum HOM05D000943 ORTHO05D010024 2.1e-27 126.7 85 80.0
Peaxi162Scf00011g01123 Petunia axillaris HOM05D000943 ORTHO05D010024 1.4e-26 124.0 85 77.6
Nitab4.5_0000787g0260 Nicotiana tabacum HOM05D000943 ORTHO05D010024 1.8e-26 123.6 85 77.6
Nitab4.5_0007295g0040 Nicotiana tabacum HOM05D000943 ORTHO05D010024 4.0e-26 122.5 85 77.6
Solyc10g150115.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 5.4e-23 112.1 82 72.0
Sopen09g012940 Solanum pennellii HOM05D009662 ORTHO05D000034 2.1e-22 110.2 88 69.3
Sopen09g020910 Solanum pennellii HOM05D002954 ORTHO05D003353 9.6e-20 101.3 80 68.8
Cc02_g23100 Coffea canephora HOM05D000943 ORTHO05D010024 2.1e-19 100.1 85 61.2
CAN.G284.3 Capsicum annuum HOM05D000943 ORTHO05D010024 3.1e-18 96.3 85 60.0
SGA_v2.0_scaffold42G15906 Striga asiatica HOM05D000943 ORTHO05D010024 5.8e-17 92.0 85 56.5
Ciclev10001198m.g Citrus clementina HOM05D000943 ORTHO05D010024 9.9e-17 91.3 85 52.9
Nitab4.5_0002550g0030 Nicotiana tabacum HOM05D000943 ORTHO05D010024 9.9e-17 91.3 85 56.5
Peaxi162Scf02228g00005 Petunia axillaris HOM05D000943 ORTHO05D010024 1.7e-16 90.5 85 57.6
GSVIVG01023255001 Vitis vinifera HOM05D000943 ORTHO05D010024 2.2e-16 90.1 85 54.1
Dinv19403 Davidia involucrata HOM05D000943 ORTHO05D010024 4.9e-16 89.0 88 54.5
Migut.N00828 Erythranthe guttata HOM05D000943 ORTHO05D010024 1.9e-15 87.0 88 55.7
Lj5A262G66 Lonicera japonica HOM05D000943 ORTHO05D010024 1.9e-15 87.0 85 52.9
SalBow3G1699 Salvia bowleyana HOM05D000943 ORTHO05D010024 3.2e-15 86.3 85 58.8
Rhsim04G0110500 Rhododendron simsii HOM05D000943 ORTHO05D010024 4.2e-15 85.9 85 51.8
Nn8g40352 Nelumbo nucifera HOM05D000943 ORTHO05D010024 9.3e-15 84.7 85 50.6
CSS0023217 Camellia sinensis var. sinensis HOM05D000943 ORTHO05D010024 1.2e-14 84.3 85 52.9
CSS0026808 Camellia sinensis var. sinensis HOM05D000943 ORTHO05D010024 1.2e-14 84.3 85 52.9
Nitab4.5_0000667g0060 Nicotiana tabacum HOM05D000943 ORTHO05D010024 1.2e-14 84.3 85 54.1
TAR628G1147 Trochodendron aralioides HOM05D000943 ORTHO05D010024 1.6e-14 84.0 85 51.8
Actinidia01604 Actinidia chinensis HOM05D000943 ORTHO05D010024 2.1e-14 83.6 85 50.6
Prupe.1G578600 Prunus persica HOM05D000943 ORTHO05D010024 2.1e-14 83.6 85 49.4
Manes.07G023600 Manihot esculenta HOM05D000943 ORTHO05D010024 2.7e-14 83.2 88 54.5
ECA234G0636 Erigeron canadensis HOM05D000943 ORTHO05D010024 3.5e-14 82.8 85 55.3
Thecc.02G019300 Theobroma cacao HOM05D000943 ORTHO05D010024 3.5e-14 82.8 85 49.4
HanXRQChr01g0027191 Helianthus annuus HOM05D000943 ORTHO05D010024 6.0e-14 82.0 85 54.1
ECA240G1917 Erigeron canadensis HOM05D000014 ORTHO05D010024 7.9e-14 81.6 85 54.1
Lsat_1_v5_gn_9_120381 Lactuca sativa HOM05D000943 ORTHO05D010024 7.9e-14 81.6 85 51.8
Potri.003G008700 Populus trichocarpa HOM05D000943 ORTHO05D010024 7.9e-14 81.6 85 48.2
CSS0044087 Camellia sinensis var. sinensis HOM05D000943 ORTHO05D010024 1.0e-13 81.3 85 51.8
Cfa004493 Carpinus fangiana HOM05D000943 ORTHO05D010024 1.8e-13 80.5 82 51.2
Sabra03G0004300 Salix brachista HOM05D000943 ORTHO05D010024 1.8e-13 80.5 85 47.1
Haze_10048 Corylus avellana HOM05D000943 ORTHO05D010024 2.3e-13 80.1 85 50.6
Duzib132G0520 Durio zibethinus HOM05D000943 ORTHO05D010024 2.3e-13 80.1 85 48.2
ClCG10G007030 Citrullus lanatus HOM05D000943 ORTHO05D010024 3.9e-13 79.3 85 44.7
Sed0011001 Sechium edule HOM05D000943 ORTHO05D010024 3.9e-13 79.3 85 44.7
VMungo0464G1442 Vigna mungo HOM05D005949 ORTHO05D006945 3.9e-13 79.3 102 43.1
COL.COLO4_17731 Corchorus olitorius HOM05D000943 ORTHO05D010024 5.1e-13 79.0 85 47.1
arahy.Tifrunner.gnm1.ann1.ZY1J0Y Arachis hypogaea HOM05D002954 ORTHO05D003353 8.7e-13 78.2 117 38.5
QL02p100337 Quercus lobata HOM05D000943 ORTHO05D010024 8.7e-13 78.2 85 49.4
Cpa.g.sc113.50 Carica papaya HOM05D000943 ORTHO05D010024 1.1e-12 77.8 85 49.4
Atru.chr6.800 Acer truncatum HOM05D000943 ORTHO05D010024 1.9e-12 77.0 85 50.6
Gohir.A04G133500 Gossypium hirsutum HOM05D000943 ORTHO05D010024 2.5e-12 76.6 85 47.1
HPP92_011385 Vanilla planifolia HOM05D000943 ORTHO05D010024 2.5e-12 76.6 85 45.9
arahy.Tifrunner.gnm1.ann1.NE3TTV Arachis hypogaea HOM05D002954 ORTHO05D003353 3.3e-12 76.3 117 38.5
CsaV3_3G006360 Cucumis sativus L. HOM05D000943 ORTHO05D010024 3.3e-12 76.3 85 42.4
Oeu064607.2 Olea europaea HOM05D000943 ORTHO05D010024 3.3e-12 76.3 77 53.2
TWI59G1092 Tripterygium wilfordii HOM05D000943 ORTHO05D010024 3.3e-12 76.3 85 49.4
Manes.10G118900 Manihot esculenta HOM05D000943 ORTHO05D010024 4.3e-12 75.9 85 47.1
PGR142G1561 Punica granatum HOM05D000943 ORTHO05D010024 5.6e-12 75.5 85 47.1
CAN.G113.4 Capsicum annuum HOM05D001717 ORTHO05D000034 9.6e-12 74.7 54 72.2
arahy.Tifrunner.gnm1.ann1.R7YZCH Arachis hypogaea HOM05D002954 ORTHO05D003353 1.3e-11 74.3 89 47.2
CiPaw.05G005300 Carya illinoinensis HOM05D000943 ORTHO05D010024 1.6e-11 73.9 85 48.2
VMungo1309G2137 Vigna mungo HOM05D000006 ORTHO05D000001 1.6e-11 73.9 99 44.4
arahy.Tifrunner.gnm1.ann1.9YTX13 Arachis hypogaea HOM05D002954 ORTHO05D003353 3.6e-11 72.8 113 38.9
ClCG10G007050 Citrullus lanatus HOM05D000943 ORTHO05D010024 4.8e-11 72.4 85 42.4
arahy.Tifrunner.gnm1.ann1.IEL8E2 Arachis hypogaea HOM05D002954 ORTHO05D003353 6.2e-11 72.0 114 37.7
arahy.Tifrunner.gnm1.ann1.4EB8G0 Arachis hypogaea HOM05D009662 ORTHO05D003353 8.1e-11 71.6 99 45.5
MELO3C016505.2 Cucumis melo HOM05D000943 ORTHO05D010024 8.1e-11 71.6 89 41.6
Gorai.012G169500 Gossypium raimondii HOM05D000943 ORTHO05D010024 8.1e-11 71.6 85 44.7
arahy.Tifrunner.gnm1.ann1.1S2QVS Arachis hypogaea HOM05D009662 ORTHO05D003353 1.1e-10 71.2 99 45.5
arahy.Tifrunner.gnm1.ann1.41X87M Arachis hypogaea HOM05D009662 ORTHO05D003353 1.1e-10 71.2 99 45.5
arahy.Tifrunner.gnm1.ann1.D1MK81 Arachis hypogaea HOM05D002954 ORTHO05D003353 1.1e-10 71.2 99 39.4
arahy.Tifrunner.gnm1.ann1.XG7NYG Arachis hypogaea HOM05D009662 ORTHO05D003353 1.1e-10 71.2 99 45.5
arahy.Tifrunner.gnm1.ann1.0Q01G3 Arachis hypogaea HOM05D002954 ORTHO05D003353 1.4e-10 70.9 117 36.8
arahy.Tifrunner.gnm1.ann1.2WW1WS Arachis hypogaea HOM05D009662 ORTHO05D003353 1.4e-10 70.9 99 45.5
arahy.Tifrunner.gnm1.ann1.NBL2GQ Arachis hypogaea HOM05D009662 ORTHO05D003353 3.1e-10 69.7 99 44.4
arahy.Tifrunner.gnm1.ann1.VKQ8LP Arachis hypogaea HOM05D009662 ORTHO05D003353 4.0e-10 69.3 99 43.4
CsaV3_3G006370 Cucumis sativus L. HOM05D000943 ORTHO05D010024 5.3e-10 68.9 85 42.4
arahy.Tifrunner.gnm1.ann1.JC8RXL Arachis hypogaea HOM05D009662 ORTHO05D003353 6.9e-10 68.6 103 42.7
Gohir.D04G176600 Gossypium hirsutum HOM05D000943 ORTHO05D010024 6.9e-10 68.6 85 43.5
Hund15466 Selenicereus undatus HOM05D000943 ORTHO05D010024 6.9e-10 68.6 93 45.2
EL10Ac4g08445 Beta vulgaris HOM05D000943 ORTHO05D010024 4.5e-09 65.9 85 42.4
arahy.Tifrunner.gnm1.ann1.LE5ID3 Arachis hypogaea HOM05D009662 ORTHO05D003353 7.6e-09 65.1 99 42.4
arahy.Tifrunner.gnm1.ann1.27XFTQ Arachis hypogaea HOM05D009662 ORTHO05D003353 1.7e-08 63.9 101 39.6
CDE06G0292 Ceratophyllum demersum HOM05D000943 ORTHO05D010024 1.7e-08 63.9 85 42.4
ATR0584G051 Amborella trichopoda HOM05D000943 ORTHO05D010024 2.2e-08 63.5 85 42.4
arahy.Tifrunner.gnm1.ann1.N8CY10 Arachis hypogaea HOM05D009662 ORTHO05D003353 2.2e-08 63.5 99 41.4
MELO3C016503.2 Cucumis melo HOM05D000943 ORTHO05D010024 2.2e-08 63.5 86 41.9
Psat2g134520 Pisum sativum HOM05D002954 ORTHO05D003353 2.2e-08 63.5 57 57.9
vmacro19866 Vaccinium macrocarpon HOM05D000943 ORTHO05D010024 2.2e-08 63.5 48 60.4
Zm00001eb139050 Zea mays HOM05D000943 ORTHO05D010024 2.9e-08 63.2 85 43.5
Lalb_Chr22g0361071 Lupinus albus HOM05D002954 ORTHO05D003353 4.9e-08 62.4 99 40.4
arahy.Tifrunner.gnm1.ann1.5TT13I Arachis hypogaea HOM05D002954 ORTHO05D003353 6.4e-08 62.0 109 32.1
Nitab4.5_0000008g0430 Nicotiana tabacum HOM05D002954 ORTHO05D015034 6.4e-08 62.0 99 38.4
unitig_22.g6855 Utricularia gibba HOM05D000943 ORTHO05D010024 6.4e-08 62.0 89 47.2
Prupe.5G099300 Prunus persica HOM05D000943 ORTHO05D010024 8.4e-08 61.6 65 46.2
TPR.G16180 Trifolium pratense HOM05D002954 ORTHO05D003353 8.4e-08 61.6 63 46.0
arahy.Tifrunner.gnm1.ann1.QKP2RW Arachis hypogaea HOM05D002954 ORTHO05D003353 1.4e-07 60.8 52 57.7
TPR.G3822 Trifolium pratense HOM05D002954 ORTHO05D003353 1.4e-07 60.8 61 45.9
Nitab4.5_0000386g0150 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.9e-07 60.5 69 42.0
Hma1.2p1_2174F.1_g316050 Hydrangea macrophylla HOM05D000943 ORTHO05D010024 5.5e-07 58.9 64 50.0
Nitab4.5_0000051g0340 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.5e-07 58.9 98 35.7
Os12g0170300 Oryza sativa ssp. japonica HOM05D000943 ORTHO05D010024 5.5e-07 58.9 85 38.8
Ah.02g128290 Amaranthus hybridus HOM05D000943 ORTHO05D010024 7.1e-07 58.5 87 37.9
arahy.Tifrunner.gnm1.ann1.FG1AAR Arachis hypogaea HOM05D009662 ORTHO05D003353 7.1e-07 58.5 62 53.2
arahy.Tifrunner.gnm1.ann1.IDQF0L Arachis hypogaea HOM05D009662 ORTHO05D003353 1.2e-06 57.8 49 59.2
arahy.Tifrunner.gnm1.ann1.B3S8NN Arachis hypogaea HOM05D002954 ORTHO05D003353 1.6e-06 57.4 56 50.0
Psat5g178080 Pisum sativum HOM05D002954 ORTHO05D003353 2.1e-06 57.0 50 58.0
Sc07g0005160 Simmondsia chinensis HOM05D000943 ORTHO05D010024 2.7e-06 56.6 85 38.8
Oeu049813.3 Olea europaea HOM05D000943 ORTHO05D010024 6.0e-06 55.5 59 50.8
Solyc11g044937.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 7.9e-06 55.1 56 44.6


User provided reference genes

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