Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G929.21 Capsicum annuum HOM05D006487 ORTHO05D007982 9.8e-209 729.9 383 100.0
PGSC0003DMG400010175 Solanum tuberosum HOM05D006487 ORTHO05D007982 4.7e-179 631.3 383 87.7
Sopen03g029330 Solanum pennellii HOM05D006487 ORTHO05D007982 7.1e-175 617.5 383 85.6
Solyc03g098620.3 Solanum lycopersicum HOM05D006487 ORTHO05D007982 4.3e-172 608.2 372 86.6
Nitab4.5_0000782g0060 Nicotiana tabacum HOM05D006487 ORTHO05D007982 6.9e-162 574.3 386 82.1
Nitab4.5_0003040g0090 Nicotiana tabacum HOM05D006487 ORTHO05D007982 8.4e-152 540.8 386 77.2
Peaxi162Scf00171g00242 Petunia axillaris HOM05D006487 ORTHO05D007982 7.4e-132 474.6 368 73.6
Dinv03426 Davidia involucrata HOM05D006487 ORTHO05D007982 1.2e-102 377.5 466 51.1
Hma1.2p1_0989F.1_g244820 Hydrangea macrophylla HOM05D006487 ORTHO05D007982 9.8e-100 367.9 464 48.5
TWI81G0553 Tripterygium wilfordii HOM05D006487 ORTHO05D007982 2.8e-94 349.7 453 49.0
Thecc.05G197400 Theobroma cacao HOM05D006487 ORTHO05D007982 1.0e-93 347.8 424 51.2
Nn4g25081 Nelumbo nucifera HOM05D006487 ORTHO05D007982 8.9e-93 344.7 436 48.2
Oeu023551.1 Olea europaea HOM05D006487 ORTHO05D007982 4.4e-92 342.4 438 49.5
Gohir.A08G225300 Gossypium hirsutum HOM05D006487 ORTHO05D007982 5.7e-92 342.0 419 50.6
Potri.004G069400 Populus trichocarpa HOM05D006487 ORTHO05D007982 3.7e-91 339.3 435 47.8
Actinidia34682 Actinidia chinensis HOM05D006487 ORTHO05D007982 4.9e-91 339.0 400 50.0
TAR629G0717 Trochodendron aralioides HOM05D006487 ORTHO05D007982 1.4e-90 337.4 479 45.9
SGA_v2.0_scaffold90G27746 Striga asiatica HOM05D006487 ORTHO05D007982 1.6e-89 334.0 449 45.4
Lsat_1_v5_gn_0_10541 Lactuca sativa HOM05D006487 ORTHO05D007982 2.7e-89 333.2 396 50.3
Gorai.004G262200 Gossypium raimondii HOM05D006487 ORTHO05D007982 1.3e-88 330.9 434 48.4
Migut.O00267 Erythranthe guttata HOM05D006487 ORTHO05D007982 3.9e-88 329.3 451 47.0
CANSAT64G1132 Cannabis sativa HOM05D006487 ORTHO05D007982 1.5e-87 327.4 448 48.2
Gohir.D08G245700 Gossypium hirsutum HOM05D006487 ORTHO05D007982 1.5e-87 327.4 425 48.5
Haze_18332 Corylus avellana HOM05D006487 ORTHO05D007982 5.6e-87 325.5 395 49.4
Prupe.5G243800 Prunus persica HOM05D006487 ORTHO05D007982 5.6e-87 325.5 456 46.1
COL.COLO4_24904 Corchorus olitorius HOM05D006487 ORTHO05D007982 1.2e-86 324.3 389 50.4
HanXRQChr15g0492111 Helianthus annuus HOM05D006487 ORTHO05D007982 2.1e-86 323.6 415 48.0
GSVIVG01027119001 Vitis vinifera HOM05D006487 ORTHO05D007982 8.0e-86 321.6 388 50.5
Manes.02G218400 Manihot esculenta HOM05D006487 ORTHO05D007982 5.2e-85 318.9 355 53.0
PGR083G2465 Punica granatum HOM05D006487 ORTHO05D007982 2.0e-84 317.0 403 46.7
Ciclev10020398m.g Citrus clementina HOM05D006487 ORTHO05D007982 2.2e-83 313.5 340 54.1
Cc04_g08450 Coffea canephora HOM05D006487 ORTHO05D007982 2.2e-83 313.5 405 49.6
DCAR_011682 Daucus carota HOM05D006487 ORTHO05D007982 2.9e-83 313.2 371 52.3
Psat1g121120 Pisum sativum HOM05D006487 ORTHO05D007982 8.3e-83 311.6 426 47.9
RcHm_v2.0_Chr7g0177071 Rosa chinensis HOM05D006487 ORTHO05D007982 1.9e-82 310.5 466 44.6
MSTRG.23212 Avicennia marina HOM05D006487 ORTHO05D007982 4.1e-82 309.3 419 46.5
Ca_11836_v3 Cicer arietinum L. HOM05D006487 ORTHO05D007982 7.0e-82 308.5 407 47.4
Glyma.09G164600 Glycine max HOM05D006487 ORTHO05D007982 7.0e-82 308.5 443 45.8
Glyma.16G213000 Glycine max HOM05D006487 ORTHO05D007982 9.2e-82 308.1 355 52.4
SalBow5G2999 Salvia bowleyana HOM05D006487 ORTHO05D007982 2.7e-81 306.6 418 46.2
AL1G54980 Arabidopsis lyrata HOM05D006487 ORTHO05D007982 4.6e-81 305.8 329 52.3
Sed0005317 Sechium edule HOM05D006487 ORTHO05D007982 7.8e-81 305.1 432 47.0
PSO782G2052 Papaver somniferum HOM05D006487 ORTHO05D007982 1.0e-80 304.7 438 45.7
FvH4_5g18410 Fragaria vesca HOM05D006487 ORTHO05D007982 1.3e-80 304.3 460 45.0
FAN13G0937 Fragaria x ananassa HOM05D006487 ORTHO05D007982 3.9e-80 302.8 434 45.9
Lj2g0009690 Lotus japonicus HOM05D006487 ORTHO05D007982 3.9e-80 302.8 444 46.2
Phvul.004G139000 Phaseolus vulgaris HOM05D006487 ORTHO05D007982 6.6e-80 302.0 434 46.8
Carub.0001s3750 Capsella rubella HOM05D006487 ORTHO05D007982 1.9e-79 300.4 339 52.5
CsaV3_1G007510 Cucumis sativus L. HOM05D006487 ORTHO05D007982 4.3e-79 299.3 439 46.9
AT1G48380 Arabidopsis thaliana HOM05D006487 ORTHO05D007982 9.5e-79 298.1 338 50.9
arahy.Tifrunner.gnm1.ann1.FG107U Arachis hypogaea HOM05D006487 ORTHO05D007982 1.6e-78 297.4 369 51.8
A08p04750 Brassica napus HOM05D006487 ORTHO05D007982 1.6e-78 297.4 341 51.9
BraA08t32504Z Brassica rapa HOM05D006487 ORTHO05D007982 1.6e-78 297.4 341 51.9
MBI06_g27513_MAGBIO Magnolia biondii HOM05D006487 ORTHO05D007982 1.6e-78 297.4 402 46.0
Aqoxy3G04297 Aquilegia oxysepala HOM05D006487 ORTHO05D007982 2.1e-78 297.0 389 45.8
MD14G1245900 Malus domestica HOM05D006487 ORTHO05D007982 4.7e-78 295.8 440 43.6
Lalb_Chr22g0353991 Lupinus albus HOM05D006487 ORTHO05D007982 8.1e-78 295.0 435 46.0
Medtr6g077860 Medicago truncatula HOM05D006487 ORTHO05D007982 1.4e-77 294.3 428 45.8
PSO063G4419 Papaver somniferum HOM05D006487 ORTHO05D007982 3.1e-77 293.1 405 45.4
Sabra04G0046600 Salix brachista HOM05D006487 ORTHO05D007982 4.0e-77 292.7 385 46.8
QL10p034099 Quercus lobata HOM05D006487 ORTHO05D007982 6.8e-77 292.0 377 48.0
BcaC07g37138 Brassica carinata HOM05D006487 ORTHO05D007982 8.9e-77 291.6 338 50.6
C08p05120 Brassica napus HOM05D006487 ORTHO05D007982 1.2e-76 291.2 340 50.3
MELO3C002168.2 Cucumis melo HOM05D006487 ORTHO05D007982 1.2e-76 291.2 439 45.3
BolC8t47322H Brassica oleracea HOM05D006487 ORTHO05D007982 1.5e-76 290.8 337 50.7
Thhalv10011620m.g Eutrema salsugineum HOM05D006487 ORTHO05D007982 1.5e-76 290.8 317 51.1
Lj9A412T44 Lonicera japonica HOM05D006487 ORTHO05D007982 1.5e-76 290.8 331 50.8
VMungo0464G1082 Vigna mungo HOM05D006487 ORTHO05D007982 1.5e-76 290.8 360 47.8
arahy.Tifrunner.gnm1.ann1.49K0I5 Arachis hypogaea HOM05D006487 ORTHO05D007982 2.0e-76 290.4 368 49.7
Atru.chr9.84 Acer truncatum HOM05D006487 ORTHO05D007982 2.6e-76 290.0 245 59.6
Rhsim08G0124800 Rhododendron simsii HOM05D006487 ORTHO05D007982 7.5e-76 288.5 526 38.8
Sp1g35330 Schrenkiella parvula HOM05D006487 ORTHO05D007982 3.7e-75 286.2 334 49.4
Eucgr.H00648 Eucalyptus grandis HOM05D006487 ORTHO05D007982 2.4e-74 283.5 209 67.5
Cpa.g.sc168.16 Carica papaya HOM05D006487 ORTHO05D007982 4.1e-74 282.7 244 59.4
Sc07g0007560 Simmondsia chinensis HOM05D006487 ORTHO05D007982 7.1e-74 282.0 411 44.8
CARHR037990 Cardamine hirsuta HOM05D006487 ORTHO05D007982 2.7e-73 280.0 352 47.7
AUR62040775 Chenopodium quinoa HOM05D006487 ORTHO05D007982 2.7e-73 280.0 252 59.1
BcaB04g17434 Brassica carinata HOM05D006487 ORTHO05D007982 4.6e-73 279.3 356 47.5
FAN18G0592 Fragaria x ananassa HOM05D006487 ORTHO05D007982 7.8e-73 278.5 340 49.4
FAN08G3399 Fragaria x ananassa HOM05D006487 ORTHO05D007982 1.7e-72 277.3 435 43.2
THA.LOC104820327 Tarenaya hassleriana HOM05D006487 ORTHO05D007982 3.0e-72 276.6 312 51.9
AUR62033020 Chenopodium quinoa HOM05D006487 ORTHO05D007982 1.5e-71 274.2 377 46.2
vmacro17744 Vaccinium macrocarpon HOM05D006487 ORTHO05D007982 2.5e-71 273.5 324 48.8
ClCG01G014820 Citrullus lanatus HOM05D006487 ORTHO05D007982 7.3e-71 271.9 251 58.6
EL10Ac8g19478 Beta vulgaris HOM05D006487 ORTHO05D007982 1.8e-69 267.3 345 46.1
TPR.G19888 Trifolium pratense HOM05D006487 ORTHO05D007982 2.6e-68 263.5 353 48.7
ATR0618G270 Amborella trichopoda HOM05D006487 ORTHO05D007982 1.3e-67 261.2 427 42.9
CDE04G1004 Ceratophyllum demersum HOM05D006487 ORTHO05D007982 9.2e-66 255.0 341 45.5
HPP92_014774 Vanilla planifolia HOM05D006487 ORTHO05D007982 5.1e-64 249.2 415 40.2
Prupe.4G244900 Prunus persica HOM05D006487 ORTHO05D007982 5.6e-63 245.7 230 57.0
Zm00001eb271770 Zea mays HOM05D006487 ORTHO05D007982 5.8e-60 235.7 411 39.7
Hund22367 Selenicereus undatus HOM05D006487 ORTHO05D007982 9.9e-60 235.0 274 49.3
FAN04G2664 Fragaria x ananassa HOM05D006487 ORTHO05D007982 6.6e-56 222.2 405 40.2
TAR629G1006 Trochodendron aralioides HOM05D006487 ORTHO05D007982 6.6e-56 222.2 138 73.2
Os07g0172200 Oryza sativa ssp. japonica HOM05D006487 ORTHO05D007982 1.1e-55 221.5 328 43.0
Pp3c5_25480 Physcomitrium patens HOM05D006487 ORTHO05D007982 1.5e-52 211.1 298 42.3
CiPaw.16G073400 Carya illinoinensis HOM05D006487 ORTHO05D007982 7.6e-52 208.8 331 44.1
SEGI_16734 Sequoiadendron giganteum HOM05D006487 ORTHO05D007982 2.4e-50 203.8 378 36.2
Cfa017861 Carpinus fangiana HOM05D006487 ORTHO05D007982 9.3e-50 201.8 265 48.7
Hma1.2p1_0989F.1_g244830 Hydrangea macrophylla HOM05D006487 ORTHO05D007982 2.1e-49 200.7 164 61.6
SMO117G0078 Selaginella moellendorffii HOM05D006487 ORTHO05D007982 1.3e-48 198.0 181 50.8
Mapoly0080s0074 Marchantia polymorpha HOM05D006487 ORTHO05D007982 2.5e-47 193.7 381 35.2
Aa31LG10G5380 Aethionema arabicum HOM05D006487 ORTHO05D007982 4.3e-47 193.0 224 49.1
AagrBONN_evm.TU.Sc2ySwM_228.567 Anthoceros agrestis HOM05D006487 ORTHO05D007982 1.3e-46 191.4 263 40.3
Pp3c25_9140 Physcomitrium patens HOM05D006487 ORTHO05D007982 1.2e-44 184.9 368 37.0
FAN09G4505 Fragaria x ananassa HOM05D006487 ORTHO05D007982 2.6e-44 183.7 121 69.4
FAN09G0815 Fragaria x ananassa HOM05D006487 ORTHO05D007982 1.2e-41 174.9 127 66.9
Prupe.2G315400 Prunus persica HOM05D006487 ORTHO05D007982 8.7e-32 142.1 211 44.1
Ca_30285_v3 Cicer arietinum L. HOM05D006487 ORTHO05D007982 3.4e-28 130.2 186 47.3
Os06g0730200 Oryza sativa ssp. japonica HOM05D006487 ORTHO05D007982 3.2e-26 123.6 127 54.3
Cre13.g576500 Chlamydomonas reinhardtii HOM05D006487 ORTHO05D007982 3.6e-25 120.2 167 37.7
CSS0035874 Camellia sinensis var. sinensis HOM05D006487 ORTHO05D007982 2.2e-22 110.9 297 33.7
CBR_g34174 Chara braunii HOM05D006487 ORTHO05D007982 2.9e-19 100.5 295 28.8
PRCOL_00006754 Prasinoderma coloniale HOM05D006487 ORTHO05D007982 6.5e-19 99.4 105 41.0
Ah.14g085790 Amaranthus hybridus HOM05D006487 ORTHO05D007982 1.9e-18 97.8 85 57.6
TPR.G27400 Trifolium pratense HOM05D006487 ORTHO05D007982 1.6e-17 94.7 77 62.3
MCO12G143 Micromonas commoda HOM05D006487 ORTHO05D007982 2.0e-15 87.8 175 36.0
ECA232G2176 Erigeron canadensis HOM05D006487 ORTHO05D007982 8.5e-11 72.4 250 30.8
BcaC05g27591 Brassica carinata HOM05D006487 ORTHO05D007982 3.9e-08 63.5 120 41.7
BcaC05g27879 Brassica carinata HOM05D024450 ORTHO05D007982 8.2e-06 55.8 75 49.3


User provided reference genes

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