Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G929.1 Capsicum annuum HOM05D000963 ORTHO05D004715 8.4e-75 283.5 133 100.0
CAN.G1298.20 Capsicum annuum HOM05D000963 ORTHO05D004715 2.5e-74 282.0 133 99.2
Sopen06g015060 Solanum pennellii HOM05D000963 ORTHO05D004715 3.0e-72 275.0 133 97.7
PGSC0003DMG400034831 Solanum tuberosum HOM05D000963 ORTHO05D004715 3.0e-72 275.0 133 97.7
Migut.D01391 Erythranthe guttata HOM05D000963 ORTHO05D004715 8.2e-70 266.9 133 96.2
Sed0014585 Sechium edule HOM05D000963 ORTHO05D004715 4.0e-69 264.6 133 95.5
Atru.chr1.3576 Acer truncatum HOM05D000963 ORTHO05D004715 1.2e-68 263.1 133 94.7
AL9U11970 Arabidopsis lyrata HOM05D000963 ORTHO05D004715 1.2e-68 263.1 133 94.7
C09p40280 Brassica napus HOM05D000963 ORTHO05D004715 1.2e-68 263.1 133 94.7
BolSC44t60816H Brassica oleracea HOM05D000963 ORTHO05D004715 1.2e-68 263.1 133 94.7
BolSC44t60829H Brassica oleracea HOM05D000963 ORTHO05D004715 1.2e-68 263.1 133 94.7
BolSC49t61135H Brassica oleracea HOM05D000963 ORTHO05D004715 1.2e-68 263.1 133 94.7
BraSC103t45422Z Brassica rapa HOM05D000963 ORTHO05D004715 1.2e-68 263.1 133 94.7
BraSC103t45433Z Brassica rapa HOM05D000963 ORTHO05D004715 1.2e-68 263.1 133 94.7
BraSC25t45904Z Brassica rapa HOM05D000963 ORTHO05D004715 1.2e-68 263.1 133 94.7
BraSC25t45917Z Brassica rapa HOM05D000963 ORTHO05D004715 1.2e-68 263.1 133 94.7
QL10p017079 Quercus lobata HOM05D000963 ORTHO05D004715 1.2e-68 263.1 132 94.7
QL93p0141_0026 Quercus lobata HOM05D000963 ORTHO05D004715 1.2e-68 263.1 132 94.7
Lsat_1_v5_gn_1_88180 Lactuca sativa HOM05D000963 ORTHO05D004715 2.6e-68 261.9 133 94.7
Lsat_1_v5_gn_2_97121 Lactuca sativa HOM05D000963 ORTHO05D004715 2.6e-68 261.9 133 94.7
Lsat_1_v5_gn_9_121741 Lactuca sativa HOM05D000963 ORTHO05D004715 2.6e-68 261.9 133 94.7
BraSC138t45541Z Brassica rapa HOM05D000963 ORTHO05D004715 7.6e-68 260.4 132 93.9
BolC9t56918H Brassica oleracea HOM05D000963 ORTHO05D004715 1.0e-67 260.0 133 94.7
BolSC29t60541H Brassica oleracea HOM05D000963 ORTHO05D004715 1.3e-67 259.6 133 93.2
Lsat_1_v5_gn_8_139840 Lactuca sativa HOM05D000963 ORTHO05D004715 1.3e-67 259.6 133 94.0
BolSC45t60916H Brassica oleracea HOM05D000963 ORTHO05D004715 1.7e-67 259.2 129 95.3
QL93p0141_0000 Quercus lobata HOM05D000963 ORTHO05D004715 2.2e-67 258.8 132 93.2
BolSC37t60787H Brassica oleracea HOM05D000963 ORTHO05D004715 2.9e-67 258.5 134 94.0
COL.COLO4_02154 Corchorus olitorius HOM05D000963 ORTHO05D004715 3.8e-67 258.1 133 93.2
BraSC59t46533Z Brassica rapa HOM05D000963 ORTHO05D004715 1.9e-66 255.8 133 91.7
Lsat_1_v5_gn_2_50801 Lactuca sativa HOM05D000963 ORTHO05D004715 1.6e-65 252.7 126 96.0
Gohir.1Z049781 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.1e-65 252.3 133 91.7
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.1e-65 252.3 129 93.0
Lsat_1_v5_gn_5_181901 Lactuca sativa HOM05D000963 ORTHO05D004715 2.7e-65 251.9 130 93.1
Lsat_1_v5_gn_5_4701 Lactuca sativa HOM05D000963 ORTHO05D004715 2.7e-65 251.9 130 93.1
Sed0012027 Sechium edule HOM05D000963 ORTHO05D004715 3.0e-64 248.4 132 90.9
CAN.G965.10 Capsicum annuum HOM05D000963 ORTHO05D004715 8.7e-64 246.9 133 90.2
CAN.G1185.10 Capsicum annuum HOM05D000963 ORTHO05D004715 5.7e-63 244.2 130 85.4
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.8e-61 239.2 124 90.3
Sed0006422 Sechium edule HOM05D000963 ORTHO05D004715 1.8e-61 239.2 127 91.3
Nitab4.5_0008665g0030 Nicotiana tabacum HOM05D000963 ORTHO05D004715 3.1e-61 238.4 123 91.1
FvH4_c3g00050 Fragaria vesca HOM05D000963 ORTHO05D004715 9.0e-61 236.9 124 91.9
HPP92_028430 Vanilla planifolia HOM05D000963 ORTHO05D004715 2.0e-60 235.7 133 85.7
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 1.0e-59 233.4 119 95.0
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 1.0e-59 233.4 119 95.0
BraSC143t45652Z Brassica rapa HOM05D000963 ORTHO05D004715 2.9e-59 231.9 134 85.8
CAN.G67.2 Capsicum annuum HOM05D000963 ORTHO05D004715 5.5e-58 227.6 145 79.3
C09p39330 Brassica napus HOM05D000963 ORTHO05D004715 1.6e-57 226.1 133 83.5
Gorai.012G060700 Gossypium raimondii HOM05D000963 ORTHO05D004715 6.7e-56 220.7 119 89.1
Medtr5g080940 Medicago truncatula HOM05D000963 ORTHO05D004715 2.0e-55 219.2 127 83.5
Gohir.D01G169154 Gossypium hirsutum HOM05D000963 ORTHO05D004715 9.7e-55 216.9 116 91.4
Potri.011G074033 Populus trichocarpa HOM05D000963 ORTHO05D004715 4.1e-53 211.5 107 93.5
Sed0003522 Sechium edule HOM05D000963 ORTHO05D004715 5.3e-53 211.1 111 91.9
Aqoxy38s008 Aquilegia oxysepala HOM05D000963 ORTHO05D004715 3.4e-52 208.4 107 92.5
Gohir.A07G151200 Gossypium hirsutum HOM05D000963 ORTHO05D004715 3.4e-52 208.4 107 91.6
SalBow1G2814 Salvia bowleyana HOM05D000963 ORTHO05D004715 7.7e-52 207.2 109 93.6
SalBow1G5969 Salvia bowleyana HOM05D000963 ORTHO05D004715 7.7e-52 207.2 109 93.6
Sabra11G0069300 Salix brachista HOM05D000963 ORTHO05D004715 1.7e-51 206.1 111 90.1
FAN13G1706 Fragaria x ananassa HOM05D000963 ORTHO05D004715 2.9e-51 205.3 110 90.9
BraSC59t46506Z Brassica rapa HOM05D000963 ORTHO05D004715 5.5e-50 201.1 103 95.1
Gohir.A01G139826 Gossypium hirsutum HOM05D000963 ORTHO05D004715 5.5e-50 201.1 133 75.9
Sed0011513 Sechium edule HOM05D000963 ORTHO05D004715 7.2e-50 200.7 127 81.1
Gohir.A04G057626 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.2e-49 199.9 107 88.8
Oeu050315.1 Olea europaea HOM05D000963 ORTHO05D004715 4.7e-49 198.0 98 99.0
Gohir.D04G096676 Gossypium hirsutum HOM05D000963 ORTHO05D004715 5.1e-48 194.5 107 86.0
arahy.Tifrunner.gnm1.ann1.D5AR02 Arachis hypogaea HOM05D000963 ORTHO05D004715 6.7e-48 194.1 119 81.5
Oeu012821.1 Olea europaea HOM05D000963 ORTHO05D004715 8.8e-48 193.7 133 77.4
Gohir.D04G054150 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.0e-47 192.6 107 86.9
Gohir.A05G286366 Gossypium hirsutum HOM05D000963 ORTHO05D004715 3.7e-46 188.3 102 89.2
Sc01g0005720 Simmondsia chinensis HOM05D000963 ORTHO05D004715 5.3e-45 184.5 107 84.1
HPP92_028419 Vanilla planifolia HOM05D000963 ORTHO05D004715 2.6e-44 182.2 97 88.7
HPP92_028432 Vanilla planifolia HOM05D000963 ORTHO05D004715 2.6e-44 182.2 97 88.7
HPP92_028383 Vanilla planifolia HOM05D000963 ORTHO05D004715 2.9e-43 178.7 97 87.6
HPP92_028406 Vanilla planifolia HOM05D000963 ORTHO05D004715 2.9e-43 178.7 97 87.6
HPP92_028415 Vanilla planifolia HOM05D000963 ORTHO05D004715 2.9e-43 178.7 97 87.6
DCAR_014935 Daucus carota HOM05D000963 ORTHO05D004715 6.5e-43 177.6 91 92.3
CSS0016818 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D004715 1.9e-42 176.0 133 68.4
BraSC58t46456Z Brassica rapa HOM05D000963 ORTHO05D004715 2.5e-42 175.6 88 93.2
arahy.Tifrunner.gnm1.ann1.0S9V2W Arachis hypogaea HOM05D000963 ORTHO05D004715 6.1e-41 171.0 91 90.1
arahy.Tifrunner.gnm1.ann1.56M0GV Arachis hypogaea HOM05D000963 ORTHO05D004715 6.1e-41 171.0 91 90.1
arahy.Tifrunner.gnm1.ann1.E29LBX Arachis hypogaea HOM05D000963 ORTHO05D004715 6.1e-41 171.0 91 90.1
arahy.Tifrunner.gnm1.ann1.NRNC1F Arachis hypogaea HOM05D000963 ORTHO05D004715 6.1e-41 171.0 91 90.1
arahy.Tifrunner.gnm1.ann1.PH4GL6 Arachis hypogaea HOM05D000963 ORTHO05D004715 6.1e-41 171.0 91 90.1
arahy.Tifrunner.gnm1.ann1.RS9AFF Arachis hypogaea HOM05D000963 ORTHO05D004715 6.1e-41 171.0 91 90.1
arahy.Tifrunner.gnm1.ann1.TDDH8C Arachis hypogaea HOM05D000963 ORTHO05D004715 6.1e-41 171.0 91 90.1
arahy.Tifrunner.gnm1.ann1.UGP0DD Arachis hypogaea HOM05D000963 ORTHO05D004715 6.1e-41 171.0 91 90.1
arahy.Tifrunner.gnm1.ann1.WD30LQ Arachis hypogaea HOM05D000963 ORTHO05D004715 6.1e-41 171.0 91 90.1
arahy.Tifrunner.gnm1.ann1.ZA1EMG Arachis hypogaea HOM05D000963 ORTHO05D004715 6.1e-41 171.0 91 90.1
Nitab4.5_0012234g0080 Nicotiana tabacum HOM05D000963 ORTHO05D004715 1.0e-40 170.2 108 80.6
Gohir.D11G164850 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.4e-40 169.9 91 92.3
arahy.Tifrunner.gnm1.ann1.54C0KZ Arachis hypogaea HOM05D000963 ORTHO05D004715 1.8e-40 169.5 91 89.0
arahy.Tifrunner.gnm1.ann1.WSE485 Arachis hypogaea HOM05D000963 ORTHO05D004715 3.0e-40 168.7 91 89.0
Lsat_1_v5_gn_2_90421 Lactuca sativa HOM05D000963 ORTHO05D004715 3.9e-40 168.3 93 92.5
Oeu015131.2 Olea europaea HOM05D000963 ORTHO05D004715 2.0e-39 166.0 96 83.3
Dinv39831 Davidia involucrata HOM05D000963 ORTHO05D004715 5.7e-39 164.5 81 95.1
Actinidia23508 Actinidia chinensis HOM05D000963 ORTHO05D004715 1.4e-37 159.8 89 86.5
arahy.Tifrunner.gnm1.ann1.0QCF99 Arachis hypogaea HOM05D000963 ORTHO05D004715 4.1e-37 158.3 82 91.5
arahy.Tifrunner.gnm1.ann1.6K111H Arachis hypogaea HOM05D000963 ORTHO05D004715 4.1e-37 158.3 82 91.5
arahy.Tifrunner.gnm1.ann1.B9EW81 Arachis hypogaea HOM05D000963 ORTHO05D004715 4.1e-37 158.3 82 91.5
arahy.Tifrunner.gnm1.ann1.NMB5YK Arachis hypogaea HOM05D000963 ORTHO05D004715 4.1e-37 158.3 82 91.5
arahy.Tifrunner.gnm1.ann1.QIDR5S Arachis hypogaea HOM05D000963 ORTHO05D004715 4.1e-37 158.3 82 91.5
Nitab4.5_0004137g0020 Nicotiana tabacum HOM05D000963 ORTHO05D004715 5.3e-37 157.9 92 87.0
CsaV3_2G008200 Cucumis sativus L. HOM05D000963 ORTHO05D004715 2.6e-36 155.6 78 92.3
Lsat_1_v5_gn_1_109481 Lactuca sativa HOM05D000963 ORTHO05D004715 6.5e-35 151.0 90 78.9
arahy.Tifrunner.gnm1.ann1.R4PVYI Arachis hypogaea HOM05D000963 ORTHO05D004715 1.5e-34 149.8 81 87.7
SabraPtG0005400 Salix brachista HOM05D000963 ORTHO05D004715 1.2e-33 146.7 85 87.1
Nitab4.5_0007400g0120 Nicotiana tabacum HOM05D000963 ORTHO05D004715 1.6e-33 146.4 93 79.6
arahy.Tifrunner.gnm1.ann1.LM30Y3 Arachis hypogaea HOM05D000963 ORTHO05D004715 2.7e-33 145.6 82 82.9
Dinv05169 Davidia involucrata HOM05D000963 ORTHO05D004715 2.7e-33 145.6 81 86.4
Gohir.A01G119775 Gossypium hirsutum HOM05D000963 ORTHO05D004715 3.6e-33 145.2 81 88.9
unitig_91.g26522 Utricularia gibba HOM05D000963 ORTHO05D004715 6.8e-32 141.0 77 81.8
unitig_91.g26525 Utricularia gibba HOM05D000963 ORTHO05D004715 6.8e-32 141.0 77 81.8
COL.COLO4_03191 Corchorus olitorius HOM05D000963 ORTHO05D004715 1.5e-31 139.8 97 76.3
Gohir.D01G023469 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.0e-31 139.4 77 87.0
Gorai.002G027900 Gossypium raimondii HOM05D000963 ORTHO05D004715 2.6e-31 139.0 77 85.7
FAN18G1953 Fragaria x ananassa HOM05D000315 ORTHO05D004100 5.7e-31 137.9 90 76.7
Glyma.06G274000 Glycine max HOM05D000963 ORTHO05D004715 1.4e-29 133.3 126 60.3
Potri.002G263451 Populus trichocarpa HOM05D000963 ORTHO05D004715 1.4e-29 133.3 81 84.0
Gohir.A04G039030 Gossypium hirsutum HOM05D000963 ORTHO05D004715 4.1e-29 131.7 72 87.5
BolSC46t60965H Brassica oleracea HOM05D000963 ORTHO05D004715 7.0e-29 131.0 67 97.0
BraSC59t46544Z Brassica rapa HOM05D000963 ORTHO05D004715 1.6e-28 129.8 74 87.8
Phvul.003G259600 Phaseolus vulgaris HOM05D000963 ORTHO05D004715 1.6e-28 129.8 89 73.0
BolSC29t60514H Brassica oleracea HOM05D000963 ORTHO05D004715 2.7e-28 129.0 67 95.5
Mapoly0147s0015 Marchantia polymorpha HOM05D000963 ORTHO05D004715 4.5e-28 128.3 123 56.9
BolSC29t60553H Brassica oleracea HOM05D000963 ORTHO05D004715 1.0e-27 127.1 65 96.9
Cpa.g.sc302.1 Carica papaya HOM05D000963 ORTHO05D004715 1.7e-27 126.3 68 94.1
Rhsim12G0135200 Rhododendron simsii HOM05D000963 ORTHO05D004715 2.2e-27 125.9 57 96.5
BolSC35t60711H Brassica oleracea HOM05D000963 ORTHO05D004715 2.9e-27 125.6 74 85.1
BolC2t10589H Brassica oleracea HOM05D000963 ORTHO05D004715 8.5e-27 124.0 67 92.5
BolSC49t61150H Brassica oleracea HOM05D000963 ORTHO05D004715 8.5e-27 124.0 67 92.5
BolSC45t60901H Brassica oleracea HOM05D000963 ORTHO05D004715 1.1e-26 123.6 74 83.8
Manes.18G094701 Manihot esculenta HOM05D000963 ORTHO05D004715 3.2e-26 122.1 74 83.8
BolC2t10606H Brassica oleracea HOM05D000963 ORTHO05D004715 2.7e-25 119.0 75 82.7
BcaNung01516 Brassica carinata HOM05D000963 ORTHO05D004715 1.4e-24 116.7 120 53.3
VMungo0331G0858 Vigna mungo HOM05D000963 ORTHO05D004715 2.0e-23 112.8 70 74.3
Sabra08G0089800 Salix brachista HOM05D000963 ORTHO05D004715 2.8e-22 109.0 93 64.5
EL10Ac7g17374 Beta vulgaris HOM05D000963 ORTHO05D004715 8.3e-22 107.5 63 84.1
EL10Ac7g17381 Beta vulgaris HOM05D000963 ORTHO05D004715 4.5e-20 101.7 63 79.4
FvH4_7g01961 Fragaria vesca HOM05D000963 ORTHO05D004715 4.5e-20 101.7 124 50.0
Psat3g162200 Pisum sativum HOM05D000963 ORTHO05D004715 1.0e-19 100.5 49 87.8
Sc25g0002020 Simmondsia chinensis HOM05D000963 ORTHO05D004715 2.3e-19 99.4 45 93.3
BolSC43t60811H Brassica oleracea HOM05D000963 ORTHO05D004715 6.6e-19 97.8 46 100.0
Hma1.2p1_0051F.1_g029250 Hydrangea macrophylla HOM05D000963 ORTHO05D004715 8.6e-19 97.4 43 95.3
Oeu054713.1 Olea europaea HOM05D000963 ORTHO05D004715 3.3e-18 95.5 48 95.8
DCAR_017253 Daucus carota HOM05D000963 ORTHO05D004715 9.5e-18 94.0 59 81.4
Gohir.A01G139250 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.2e-17 93.6 46 91.3
BraSC179t45779Z Brassica rapa HOM05D000963 ORTHO05D004715 1.6e-17 93.2 44 100.0
TPR.G27622 Trifolium pratense HOM05D000963 ORTHO05D004715 2.1e-17 92.8 46 89.1
FAN01G1433 Fragaria x ananassa HOM05D000963 ORTHO05D004715 1.4e-16 90.1 54 87.0
Medtr1g105230 Medicago truncatula HOM05D000963 ORTHO05D004715 5.2e-16 88.2 41 92.7
Oeu033793.1 Olea europaea HOM05D001982 ORTHO05D003938 5.2e-16 88.2 55 83.6
Lj4g0000207 Lotus japonicus HOM05D000963 ORTHO05D004715 3.4e-15 85.5 41 97.6
FAN06G2610 Fragaria x ananassa HOM05D000963 ORTHO05D004715 7.5e-15 84.3 49 83.7
CAN.G1594.2 Capsicum annuum HOM05D016096 ORTHO05D016167 2.2e-14 82.8 43 88.4
arahy.Tifrunner.gnm1.ann1.HN8ZWX Arachis hypogaea HOM05D000963 ORTHO05D004715 4.9e-14 81.6 41 92.7
Psat5g119040 Pisum sativum HOM05D000963 ORTHO05D004715 4.9e-14 81.6 85 55.3
Thecc.09G087300 Theobroma cacao HOM05D000963 ORTHO05D004715 6.3e-14 81.3 43 93.0
Gorai.002G200300 Gossypium raimondii HOM05D000963 ORTHO05D004715 3.5e-12 75.5 35 88.6
arahy.Tifrunner.gnm1.ann1.3DS1LI Arachis hypogaea HOM05D004473 ORTHO05D005652 3.3e-10 68.9 41 82.9
arahy.Tifrunner.gnm1.ann1.SGP77C Arachis hypogaea HOM05D004473 ORTHO05D005652 3.3e-10 68.9 41 82.9
Sc21g0003630 Simmondsia chinensis HOM05D000556 ORTHO05D000404 1.4e-08 63.5 46 69.6
Migut.N00577 Erythranthe guttata HOM05D000963 ORTHO05D004715 5.2e-08 61.6 52 75.0


User provided reference genes

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