Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G924.3 Capsicum annuum HOM05D006459 ORTHO05D008414 4.3e-217 757.7 378 100.0
Sopen11g018500 Solanum pennellii HOM05D006459 ORTHO05D008414 3.2e-180 635.2 345 93.3
Solyc11g042430.2 Solanum lycopersicum HOM05D006459 ORTHO05D008414 5.5e-180 634.4 347 92.8
Nitab4.5_0000903g0050 Nicotiana tabacum HOM05D006459 ORTHO05D008414 3.4e-161 572.0 345 84.9
Thecc.08G176900 Theobroma cacao HOM05D006459 ORTHO05D008414 1.4e-159 566.6 352 81.0
Peaxi162Scf00078g00423 Petunia axillaris HOM05D006459 ORTHO05D008414 5.4e-159 564.7 345 83.5
MSTRG.1592 Avicennia marina HOM05D006459 ORTHO05D008414 9.2e-159 563.9 350 79.1
TAR628G1703 Trochodendron aralioides HOM05D006459 ORTHO05D008414 5.9e-158 561.2 344 80.5
Actinidia29387 Actinidia chinensis HOM05D006459 ORTHO05D008414 7.8e-158 560.8 342 81.0
Atru.chr13.2479 Acer truncatum HOM05D006459 ORTHO05D008414 1.7e-157 559.7 351 78.1
CSS0029003 Camellia sinensis var. sinensis HOM05D006459 ORTHO05D008414 2.3e-157 559.3 349 77.7
Gorai.009G266900 Gossypium raimondii HOM05D006459 ORTHO05D008414 3.0e-157 558.9 342 80.7
Dinv09391 Davidia involucrata HOM05D006459 ORTHO05D008414 3.9e-157 558.5 348 79.9
Potri.019G072900 Populus trichocarpa HOM05D006459 ORTHO05D008414 6.6e-157 557.8 351 78.1
GSVIVG01036383001 Vitis vinifera HOM05D006459 ORTHO05D008414 8.6e-157 557.4 349 80.5
Gohir.D05G255500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 3.3e-156 555.4 342 80.4
Gohir.A05G253500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 7.3e-156 554.3 342 80.1
Migut.C01370 Erythranthe guttata HOM05D006459 ORTHO05D008414 9.5e-156 553.9 349 78.5
CiPaw.03G015900 Carya illinoinensis HOM05D006459 ORTHO05D008414 2.8e-155 552.4 347 79.0
Cc10_g08780 Coffea canephora HOM05D006459 ORTHO05D008414 3.6e-155 552.0 332 81.3
CiPaw.03G015700 Carya illinoinensis HOM05D006459 ORTHO05D008414 4.7e-155 551.6 347 79.3
MD08G1213000 Malus domestica HOM05D006459 ORTHO05D008414 4.7e-155 551.6 352 77.8
Lsat_1_v5_gn_4_65220 Lactuca sativa HOM05D006459 ORTHO05D008414 8.0e-155 550.8 342 77.8
EL10Ac1g01666 Beta vulgaris HOM05D006459 ORTHO05D008414 1.8e-154 549.7 343 78.7
Manes.18G118600 Manihot esculenta HOM05D006459 ORTHO05D008414 2.3e-154 549.3 351 77.8
Prupe.1G544300 Prunus persica HOM05D006459 ORTHO05D008414 3.1e-154 548.9 352 77.6
Cfa008090 Carpinus fangiana HOM05D006459 ORTHO05D008414 5.2e-154 548.1 347 77.5
VMungo1215G2765 Vigna mungo HOM05D006459 ORTHO05D008414 6.8e-154 547.7 347 76.4
Haze_13948 Corylus avellana HOM05D006459 ORTHO05D008414 4.4e-153 545.0 335 79.1
RcHm_v2.0_Chr7g0232091 Rosa chinensis HOM05D006459 ORTHO05D008414 4.4e-153 545.0 357 75.9
Ciclev10020855m.g Citrus clementina HOM05D006459 ORTHO05D008414 7.5e-153 544.3 350 76.9
Potri.013G099900 Populus trichocarpa HOM05D006459 ORTHO05D008414 1.3e-152 543.5 347 76.4
TWI75G0925 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 1.3e-152 543.5 347 76.1
FvH4_5g33360 Fragaria vesca HOM05D006459 ORTHO05D008414 2.2e-152 542.7 348 77.9
Sabra19G0084300 Salix brachista HOM05D006459 ORTHO05D008414 3.7e-152 542.0 349 75.9
HanXRQChr14g0455131 Helianthus annuus HOM05D006459 ORTHO05D008414 1.4e-151 540.0 373 72.1
Phvul.002G036200 Phaseolus vulgaris HOM05D006459 ORTHO05D008414 1.4e-151 540.0 347 75.5
SalBow7G1102 Salvia bowleyana HOM05D006459 ORTHO05D008414 1.9e-151 539.7 338 77.8
Psat2g187200 Pisum sativum HOM05D006459 ORTHO05D008414 3.2e-151 538.9 346 74.0
QL09p002119 Quercus lobata HOM05D006459 ORTHO05D008414 7.0e-151 537.7 351 76.1
CANSAT54G1068 Cannabis sativa HOM05D006459 ORTHO05D008414 9.2e-151 537.3 349 76.2
COL.COLO4_24570 Corchorus olitorius HOM05D006459 ORTHO05D008414 9.2e-151 537.3 352 76.7
Medtr5g008450 Medicago truncatula HOM05D006459 ORTHO05D008414 9.2e-151 537.3 346 73.4
Cpa.g.sc21.78 Carica papaya HOM05D006459 ORTHO05D008414 2.7e-150 535.8 351 76.1
Glyma.11G014000 Glycine max HOM05D006459 ORTHO05D008414 2.7e-150 535.8 350 74.6
THA.LOC104815846 Tarenaya hassleriana HOM05D006459 ORTHO05D008414 1.0e-149 533.9 347 74.9
Ca_24473_v3 Cicer arietinum L. HOM05D006459 ORTHO05D008414 1.7e-149 533.1 346 73.7
CsaV3_5G040000 Cucumis sativus L. HOM05D006459 ORTHO05D008414 3.9e-149 531.9 343 77.0
Sed0024118 Sechium edule HOM05D006459 ORTHO05D008414 5.0e-149 531.6 342 77.8
Oeu023200.3 Olea europaea HOM05D006459 ORTHO05D008414 6.6e-149 531.2 312 82.4
ECA234G2100 Erigeron canadensis HOM05D006459 ORTHO05D008414 2.5e-148 529.3 321 80.1
Lalb_Chr09g0320511 Lupinus albus HOM05D006459 ORTHO05D008414 2.5e-148 529.3 334 74.6
Eucgr.F02979 Eucalyptus grandis HOM05D006459 ORTHO05D008414 4.3e-148 528.5 340 74.7
arahy.Tifrunner.gnm1.ann1.LVU4B6 Arachis hypogaea HOM05D006459 ORTHO05D008414 2.8e-147 525.8 351 72.6
LjContig00222g0004888 Lotus japonicus HOM05D006459 ORTHO05D008414 2.8e-147 525.8 342 74.0
MBI03_g28420_MAGBIO Magnolia biondii HOM05D006459 ORTHO05D008414 3.6e-147 525.4 333 76.9
HPP92_005641 Vanilla planifolia HOM05D006459 ORTHO05D008414 8.1e-147 524.2 344 73.8
Aqoxy5G00842 Aquilegia oxysepala HOM05D006459 ORTHO05D008414 3.1e-146 522.3 358 72.3
BcaB01g02766 Brassica carinata HOM05D006459 ORTHO05D008414 3.1e-146 522.3 341 73.6
AL6G43830 Arabidopsis lyrata HOM05D006459 ORTHO05D008414 4.0e-146 521.9 343 73.8
Sp6g07420 Schrenkiella parvula HOM05D006459 ORTHO05D008414 5.2e-146 521.5 346 74.0
BcaC01g04692 Brassica carinata HOM05D006459 ORTHO05D008414 8.9e-146 520.8 341 73.3
BolC3t15799H Brassica oleracea HOM05D006459 ORTHO05D008414 8.9e-146 520.8 341 73.3
MELO3C022178.2 Cucumis melo HOM05D006459 ORTHO05D008414 8.9e-146 520.8 348 73.9
ClCG08G001020 Citrullus lanatus HOM05D006459 ORTHO05D008414 3.4e-145 518.8 336 77.4
PGR042G0716 Punica granatum HOM05D006459 ORTHO05D008414 3.4e-145 518.8 344 72.7
FAN04G1764 Fragaria x ananassa HOM05D006459 ORTHO05D008414 4.4e-145 518.5 377 71.4
BraA03t12083Z Brassica rapa HOM05D006459 ORTHO05D008414 9.8e-145 517.3 341 72.7
Nitab4.5_0000999g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 1.3e-144 516.9 345 79.1
PSO170G3138 Papaver somniferum HOM05D006459 ORTHO05D008414 2.9e-144 515.8 341 72.1
AT4G10050 Arabidopsis thaliana HOM05D006459 ORTHO05D008414 4.9e-144 515.0 343 72.9
C03p34880 Brassica napus HOM05D006459 ORTHO05D008414 4.9e-144 515.0 341 72.4
Aa31LG9G11940 Aethionema arabicum HOM05D006459 ORTHO05D008414 6.4e-144 514.6 346 73.7
A03p28850 Brassica napus HOM05D006459 ORTHO05D008414 8.3e-144 514.2 341 72.4
PSO017G7078 Papaver somniferum HOM05D006459 ORTHO05D008414 8.3e-144 514.2 341 72.1
Carub.0006s2860 Capsella rubella HOM05D006459 ORTHO05D008414 1.1e-143 513.8 343 72.6
TPR.G37896 Trifolium pratense HOM05D006459 ORTHO05D008414 1.9e-143 513.1 398 64.1
Thhalv10028776m.g Eutrema salsugineum HOM05D006459 ORTHO05D008414 2.1e-142 509.6 343 72.3
MD15G1395500 Malus domestica HOM05D006459 ORTHO05D008414 8.6e-141 504.2 353 72.8
Os04g0443500 Oryza sativa ssp. japonica HOM05D006459 ORTHO05D008414 4.7e-139 498.4 339 72.6
unitig_8.g4894 Utricularia gibba HOM05D006459 ORTHO05D008414 2.0e-137 493.0 344 71.2
ATR1089G027 Amborella trichopoda HOM05D006459 ORTHO05D008414 1.7e-136 490.0 341 69.5
Nitab4.5_0003013g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 4.9e-136 488.4 345 75.4
Zm00001eb082080 Zea mays HOM05D006459 ORTHO05D008414 1.0e-133 480.7 349 68.2
Pp3c6_4660 Physcomitrium patens HOM05D006459 ORTHO05D008414 4.9e-128 461.8 319 68.7
AagrBONN_evm.TU.Sc2ySwM_117.506 Anthoceros agrestis HOM05D006459 ORTHO05D008414 7.1e-127 458.0 328 66.8
TWI12G1446 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 7.1e-127 458.0 263 83.7
Mapoly0007s0278 Marchantia polymorpha HOM05D006459 ORTHO05D008414 5.1e-125 451.8 354 62.4
AUR62034346 Chenopodium quinoa HOM05D006459 ORTHO05D008414 4.9e-120 435.3 253 84.2
SMO356G0681 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 2.1e-118 429.9 312 66.3
Lj9A698G57 Lonicera japonica HOM05D006459 ORTHO05D008414 2.6e-113 412.9 337 65.9
arahy.Tifrunner.gnm1.ann1.K3NID2 Arachis hypogaea HOM05D006459 ORTHO05D008414 7.6e-113 411.4 399 56.6
Duzib268G1319 Durio zibethinus HOM05D006459 ORTHO05D008414 1.9e-111 406.8 344 64.2
DCAR_017359 Daucus carota HOM05D006459 ORTHO05D008414 1.0e-109 401.0 229 84.3
SGA_v2.0_scaffold118G32601 Striga asiatica HOM05D006459 ORTHO05D008414 5.1e-109 398.7 366 61.2
Rhsim02G0145500 Rhododendron simsii HOM05D006459 ORTHO05D008414 1.9e-108 396.7 528 47.3
Sc25g0003010 Simmondsia chinensis HOM05D006459 ORTHO05D008414 7.6e-105 384.8 222 82.9
Nn5g27277 Nelumbo nucifera HOM05D006459 ORTHO05D008414 3.5e-102 375.9 247 76.5
Hma1.2p1_0074F.1_g039070 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 3.8e-88 329.3 279 63.1
SHI16717 Sapria himalayana HOM05D006459 ORTHO05D008414 1.8e-82 310.5 322 54.7
Hma1.2p1_0074F.1_g039080 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 6.7e-77 292.0 167 82.0
vmacro16046 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 7.7e-73 278.5 177 78.0
Cre12.g521250 Chlamydomonas reinhardtii HOM05D006459 ORTHO05D008414 3.6e-70 269.6 400 39.5
CBR_g45928 Chara braunii HOM05D006459 ORTHO05D008414 1.8e-69 267.3 220 59.1
Haze_26337 Corylus avellana HOM05D006459 ORTHO05D008414 9.1e-66 255.0 319 46.1
HPP92_005619 Vanilla planifolia HOM05D006459 ORTHO05D008414 2.0e-57 227.3 132 77.3
Glyma.01G230800 Glycine max HOM05D006459 ORTHO05D008414 4.4e-52 209.5 127 79.5
MCO04G089 Micromonas commoda HOM05D006459 ORTHO05D008414 5.9e-49 199.1 323 39.0
PRCOL_00002994 Prasinoderma coloniale HOM05D006459 ORTHO05D008414 8.6e-48 195.3 343 35.9
SEGI_15073 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 1.2e-44 184.9 126 70.6
HPP92_005618 Vanilla planifolia HOM05D006459 ORTHO05D008414 5.0e-40 169.5 98 79.6
SMO272G0012 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 1.1e-37 161.8 104 70.2
vmacro16045 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 5.4e-34 149.4 84 85.7
CBR_g27970 Chara braunii HOM05D006459 ORTHO05D008414 6.0e-25 119.4 81 69.1
FAN08G1548 Fragaria x ananassa HOM05D006459 ORTHO05D008414 3.3e-23 113.6 65 81.5
SEGI_06082 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 4.1e-18 96.7 76 61.8
Nn179s44626 Nelumbo nucifera HOM05D006459 ORTHO05D008414 1.5e-15 88.2 56 82.1
SEGI_00088 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 1.6e-09 68.2 44 68.2
MELO3C033538.2 Cucumis melo HOM05D006459 ORTHO05D169875 3.9e-08 63.5 143 32.2
Lsat_1_v5_gn_2_49420 Lactuca sativa HOM05D006459 ORTHO05D008414 2.8e-06 57.4 30 86.7


User provided reference genes

Program Settings