Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G92.20 Capsicum annuum HOM05D007348 ORTHO05D009257 3.2e-69 265.0 136 100.0
PGSC0003DMG400019150 Solanum tuberosum HOM05D007348 ORTHO05D009257 2.2e-54 215.7 132 87.1
Sopen10g035960 Solanum pennellii HOM05D007348 ORTHO05D009257 3.3e-50 201.8 131 82.4
Nitab4.5_0008097g0010 Nicotiana tabacum HOM05D007348 ORTHO05D009257 1.8e-48 196.1 135 77.0
Solyc10g086570.3 Solanum lycopersicum HOM05D007348 ORTHO05D009257 6.9e-48 194.1 132 80.3
Nitab4.5_0000527g0200 Nicotiana tabacum HOM05D007348 ORTHO05D009257 2.0e-47 192.6 134 76.1
Peaxi162Scf00330g00089 Petunia axillaris HOM05D007348 ORTHO05D009257 3.0e-43 178.7 138 68.8
TWI77G0545 Tripterygium wilfordii HOM05D007348 ORTHO05D009257 1.1e-40 170.2 120 73.3
MD12G1144800 Malus domestica HOM05D007348 ORTHO05D009257 2.6e-39 165.6 92 88.0
Potri.006G087701 Populus trichocarpa HOM05D007348 ORTHO05D009257 2.6e-39 165.6 106 80.2
Manes.08G081300 Manihot esculenta HOM05D007348 ORTHO05D009257 4.5e-39 164.9 99 83.8
Cc06_g02390 Coffea canephora HOM05D007348 ORTHO05D009257 5.8e-39 164.5 132 67.4
Cfa017345 Carpinus fangiana HOM05D007348 ORTHO05D009257 7.6e-39 164.1 122 70.5
CiPaw.09G195200 Carya illinoinensis HOM05D007348 ORTHO05D009257 9.9e-39 163.7 94 88.3
COL.COLO4_14769 Corchorus olitorius HOM05D007348 ORTHO05D009257 1.3e-38 163.3 105 79.0
Sabra06G0067000 Salix brachista HOM05D007348 ORTHO05D009257 1.3e-38 163.3 106 80.2
Thecc.05G036200 Theobroma cacao HOM05D007348 ORTHO05D009257 1.7e-38 162.9 103 78.6
CSS0018490 Camellia sinensis var. sinensis HOM05D007348 ORTHO05D009257 2.2e-38 162.5 109 77.1
Ciclev10013090m.g Citrus clementina HOM05D007348 ORTHO05D009257 2.2e-38 162.5 95 86.3
SGA_v2.0_scaffold94G28573 Striga asiatica HOM05D007348 ORTHO05D009257 3.8e-38 161.8 123 71.5
Gohir.A09G154300 Gossypium hirsutum HOM05D007348 ORTHO05D009257 6.4e-38 161.0 97 81.4
Gorai.006G171200 Gossypium raimondii HOM05D007348 ORTHO05D009257 6.4e-38 161.0 107 78.5
QL07p048913 Quercus lobata HOM05D007348 ORTHO05D009257 6.4e-38 161.0 113 76.1
Oeu006894.1 Olea europaea HOM05D007348 ORTHO05D009257 8.4e-38 160.6 131 68.7
Dinv37151 Davidia involucrata HOM05D007348 ORTHO05D009257 1.9e-37 159.5 109 76.1
Prupe.6G258300 Prunus persica HOM05D007348 ORTHO05D009257 1.9e-37 159.5 93 82.8
C09p74340 Brassica napus HOM05D007348 ORTHO05D009257 2.4e-37 159.1 109 74.3
BolC9t60168H Brassica oleracea HOM05D007348 ORTHO05D009257 2.4e-37 159.1 109 74.3
Gohir.D09G150000 Gossypium hirsutum HOM05D007348 ORTHO05D009257 2.4e-37 159.1 95 84.2
CANSAT35G0511 Cannabis sativa HOM05D007348 ORTHO05D009257 4.2e-37 158.3 94 83.0
A10p33440 Brassica napus HOM05D007348 ORTHO05D009257 5.5e-37 157.9 120 69.2
BraA10t45374Z Brassica rapa HOM05D007348 ORTHO05D009257 5.5e-37 157.9 120 69.2
MD04G1131700 Malus domestica HOM05D007348 ORTHO05D009257 5.5e-37 157.9 92 83.7
ECA247G0870 Erigeron canadensis HOM05D007348 ORTHO05D009257 7.1e-37 157.5 119 70.6
Migut.L01962 Erythranthe guttata HOM05D007348 ORTHO05D009257 9.3e-37 157.1 141 65.2
Atru.chr8.2007 Acer truncatum HOM05D007348 ORTHO05D009257 1.2e-36 156.8 125 67.2
ClCG10G021280 Citrullus lanatus HOM05D007348 ORTHO05D009257 1.2e-36 156.8 92 83.7
Lsat_1_v5_gn_9_32101 Lactuca sativa HOM05D007348 ORTHO05D009257 1.2e-36 156.8 95 82.1
RcHm_v2.0_Chr3g0466241 Rosa chinensis HOM05D007348 ORTHO05D009257 1.2e-36 156.8 131 66.4
TAR636G0176 Trochodendron aralioides HOM05D007348 ORTHO05D009257 1.2e-36 156.8 91 85.7
ATR0559G267 Amborella trichopoda HOM05D007348 ORTHO05D009257 1.6e-36 156.4 124 63.7
Migut.J00309 Erythranthe guttata HOM05D007348 ORTHO05D009257 1.6e-36 156.4 109 72.5
vmacro20175 Vaccinium macrocarpon HOM05D007348 ORTHO05D009257 2.1e-36 156.0 111 71.2
LjContig00141g0000939 Lotus japonicus HOM05D007348 ORTHO05D009257 2.7e-36 155.6 109 75.2
Sed0022418 Sechium edule HOM05D007348 ORTHO05D009257 2.7e-36 155.6 131 66.4
Eucgr.K03108 Eucalyptus grandis HOM05D007348 ORTHO05D009257 3.5e-36 155.2 92 83.7
Cpa.g.sc169.14 Carica papaya HOM05D007348 ORTHO05D009257 6.0e-36 154.5 92 81.5
TAR636G2125 Trochodendron aralioides HOM05D007348 ORTHO05D009257 6.0e-36 154.5 91 84.6
AT5G02160 Arabidopsis thaliana HOM05D007348 ORTHO05D009257 1.0e-35 153.7 117 68.4
FAN05G4426 Fragaria x ananassa HOM05D007348 ORTHO05D009257 1.0e-35 153.7 127 65.4
HanXRQChr10g0298181 Helianthus annuus HOM05D007348 ORTHO05D009257 1.0e-35 153.7 130 66.2
THA.LOC104816258 Tarenaya hassleriana HOM05D007348 ORTHO05D009257 1.0e-35 153.7 92 80.4
PSO063G2704 Papaver somniferum HOM05D007348 ORTHO05D009257 1.3e-35 153.3 128 66.4
PSO339G0488 Papaver somniferum HOM05D007348 ORTHO05D009257 1.3e-35 153.3 113 69.0
GSVIVG01034135001 Vitis vinifera HOM05D007348 ORTHO05D009257 1.3e-35 153.3 114 69.3
FvH4_6g13360 Fragaria vesca HOM05D007348 ORTHO05D009257 1.8e-35 152.9 127 64.6
FAN14G5390 Fragaria x ananassa HOM05D007348 ORTHO05D009257 1.8e-35 152.9 127 64.6
Haze_20824 Corylus avellana HOM05D007348 ORTHO05D009257 2.3e-35 152.5 139 61.2
FAN02G3968 Fragaria x ananassa HOM05D007348 ORTHO05D009257 2.3e-35 152.5 127 64.6
CDE04G2102 Ceratophyllum demersum HOM05D000082 ORTHO05D001639 3.0e-35 152.1 101 74.3
Glyma.18G184000 Glycine max HOM05D007348 ORTHO05D009257 3.0e-35 152.1 108 72.2
FAN09G3409 Fragaria x ananassa HOM05D007348 ORTHO05D009257 3.9e-35 151.8 127 65.4
Aqoxy1G00895 Aquilegia oxysepala HOM05D007348 ORTHO05D009257 6.7e-35 151.0 113 69.0
MELO3C009245.2 Cucumis melo HOM05D007348 ORTHO05D009257 6.7e-35 151.0 94 81.9
CsaV3_3G034760 Cucumis sativus L. HOM05D007348 ORTHO05D009257 6.7e-35 151.0 94 83.0
PGR004G1504 Punica granatum HOM05D007348 ORTHO05D009257 6.7e-35 151.0 92 79.3
SEGI_32371 Sequoiadendron giganteum HOM05D007348 ORTHO05D009257 6.7e-35 151.0 94 76.6
Actinidia11269 Actinidia chinensis HOM05D007348 ORTHO05D009257 8.7e-35 150.6 122 66.4
CDE07G1011 Ceratophyllum demersum HOM05D007348 ORTHO05D009257 8.7e-35 150.6 101 73.3
Phvul.008G118700 Phaseolus vulgaris HOM05D007348 ORTHO05D009257 8.7e-35 150.6 95 77.9
AUR62042385 Chenopodium quinoa HOM05D007348 ORTHO05D009257 1.1e-34 150.2 97 75.3
Glyma.07G134500 Glycine max HOM05D007348 ORTHO05D009257 1.5e-34 149.8 96 78.1
unitig_21.g21015 Utricularia gibba HOM05D007348 ORTHO05D009257 1.5e-34 149.8 118 68.6
VMungo1383G1736 Vigna mungo HOM05D007348 ORTHO05D009257 1.5e-34 149.8 95 77.9
EL10As1g23094 Beta vulgaris HOM05D007348 ORTHO05D009257 2.5e-34 149.1 123 66.7
Lalb_Chr01g0022591 Lupinus albus HOM05D007348 ORTHO05D009257 4.3e-34 148.3 94 75.5
Ca_25900_v3 Cicer arietinum L. HOM05D007348 ORTHO05D009257 9.6e-34 147.1 95 74.7
MBI14_g08036_MAGBIO Magnolia biondii HOM05D007348 ORTHO05D009257 9.6e-34 147.1 90 80.0
Ah.12g059960 Amaranthus hybridus HOM05D007348 ORTHO05D009257 1.3e-33 146.7 96 76.0
Pp3c3_5420 Physcomitrium patens HOM05D007348 ORTHO05D009257 1.3e-33 146.7 130 61.5
Sp6g40280 Schrenkiella parvula HOM05D007348 ORTHO05D009257 1.3e-33 146.7 109 70.6
Sc01g0004470 Simmondsia chinensis HOM05D007348 ORTHO05D009257 1.6e-33 146.4 92 79.3
Pp3c13_7350 Physcomitrium patens HOM05D007348 ORTHO05D009257 2.1e-33 146.0 104 73.1
Thhalv10014990m.g Eutrema salsugineum HOM05D007348 ORTHO05D009257 2.8e-33 145.6 83 85.5
Nn2g13409 Nelumbo nucifera HOM05D007348 ORTHO05D009257 2.8e-33 145.6 93 78.5
Hund09099 Selenicereus undatus HOM05D007348 ORTHO05D009257 3.7e-33 145.2 96 76.0
Aa31LG1G22570 Aethionema arabicum HOM05D007348 ORTHO05D009257 4.8e-33 144.8 137 62.0
arahy.Tifrunner.gnm1.ann1.HF038C Arachis hypogaea HOM05D007348 ORTHO05D009257 4.8e-33 144.8 104 70.2
arahy.Tifrunner.gnm1.ann1.IF8W7F Arachis hypogaea HOM05D007348 ORTHO05D009257 4.8e-33 144.8 127 60.6
Carub.0006s0100 Capsella rubella HOM05D007348 ORTHO05D009257 1.1e-32 143.7 82 84.1
Medtr7g062470 Medicago truncatula HOM05D007348 ORTHO05D009257 1.1e-32 143.7 84 81.0
AL6G11390 Arabidopsis lyrata HOM05D007348 ORTHO05D009257 1.4e-32 143.3 82 84.1
Zm00001eb355890 Zea mays HOM05D007348 ORTHO05D009257 1.8e-32 142.9 87 78.2
CARHR211200 Cardamine hirsuta HOM05D007348 ORTHO05D009257 6.9e-32 141.0 94 74.5
Os05g0110100 Oryza sativa ssp. japonica HOM05D007348 ORTHO05D009257 9.0e-32 140.6 83 81.9
Psat3g137840 Pisum sativum HOM05D007348 ORTHO05D009257 9.0e-32 140.6 94 68.1
Duzib106G1977 Durio zibethinus HOM05D007348 ORTHO05D009257 1.5e-31 139.8 126 57.9
HPP92_026789 Vanilla planifolia HOM05D007348 ORTHO05D009257 4.9e-30 134.8 84 78.6
Duzib093G0801 Durio zibethinus HOM05D007348 ORTHO05D009257 6.5e-30 134.4 122 60.7
Mapoly0046s0114 Marchantia polymorpha HOM05D007348 ORTHO05D009257 1.4e-29 133.3 85 76.5
SMO174G0219 Selaginella moellendorffii HOM05D007348 ORTHO05D009257 9.3e-29 130.6 88 69.3
CBR_g52180 Chara braunii HOM05D007348 ORTHO05D009257 6.7e-27 124.4 89 71.9
CANSAT35G1486 Cannabis sativa HOM05D007348 ORTHO05D009257 1.9e-21 106.3 95 61.1
TPR.G27019 Trifolium pratense HOM05D007348 ORTHO05D009257 4.1e-16 88.6 46 87.0
HPP92_000744 Vanilla planifolia HOM05D007348 ORTHO05D009257 2.2e-14 82.8 84 53.6
AagrBONN_evm.TU.Sc2ySwM_117.386 Anthoceros agrestis HOM05D007348 ORTHO05D009257 2.4e-08 62.8 40 77.5
TPR.G1710 Trifolium pratense HOM05D007348 ORTHO05D009257 5.3e-08 61.6 72 48.6


User provided reference genes

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