Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G919.45 Capsicum annuum HOM05D000823 ORTHO05D000088 2.1e-222 775.4 392 100.0
Sopen06g030580 Solanum pennellii HOM05D000823 ORTHO05D000088 2.3e-51 207.2 196 56.1
Solyc06g074160.3 Solanum lycopersicum HOM05D000823 ORTHO05D000088 5.0e-51 206.1 196 56.1
PGSC0003DMG400005893 Solanum tuberosum HOM05D000823 ORTHO05D000088 8.9e-40 168.7 171 53.8
PGSC0003DMG400005934 Solanum tuberosum HOM05D000823 ORTHO05D000088 3.1e-24 117.1 186 37.6
Sopen06g030390 Solanum pennellii HOM05D000823 ORTHO05D000088 4.4e-23 113.2 186 37.6
Lj2A565G28 Lonicera japonica HOM05D000395 ORTHO05D000088 8.4e-14 82.4 82 46.3
Cc00_g07580 Coffea canephora HOM05D000823 ORTHO05D000088 2.4e-13 80.9 82 45.1
Lj2A601G13 Lonicera japonica HOM05D000395 ORTHO05D000088 4.2e-13 80.1 82 45.1
Lj2A565G29 Lonicera japonica HOM05D000395 ORTHO05D000088 9.3e-13 79.0 82 43.9
Lj2A600T56 Lonicera japonica HOM05D000395 ORTHO05D000088 9.3e-13 79.0 81 46.9
Dinv26764 Davidia involucrata HOM05D000823 ORTHO05D000088 3.5e-12 77.0 83 42.2
Lj2C600G8 Lonicera japonica HOM05D000395 ORTHO05D000088 3.5e-12 77.0 80 46.2
Lj2C600T9 Lonicera japonica HOM05D000395 ORTHO05D000088 7.9e-12 75.9 82 43.9
Nitab4.5_0000380g0010 Nicotiana tabacum HOM05D000823 ORTHO05D000088 1.3e-11 75.1 143 34.3
CAN.G1330.13 Capsicum annuum HOM05D000089 ORTHO05D000104 2.3e-11 74.3 65 61.5
PGSC0003DMG400010000 Solanum tuberosum HOM05D000089 ORTHO05D000104 3.0e-11 73.9 42 78.6
Lj2A564T41 Lonicera japonica HOM05D000395 ORTHO05D000088 8.7e-11 72.4 146 33.6
CAN.G1463.9 Capsicum annuum HOM05D000002 ORTHO05D000001 2.5e-10 70.9 67 49.3
GSVIVG01031853001 Vitis vinifera HOM05D008110 ORTHO05D005106 3.3e-10 70.5 82 43.9
Lsat_1_v5_gn_4_177680 Lactuca sativa HOM05D000823 ORTHO05D000088 4.3e-10 70.1 82 41.5
Solyc04g082780.3 Solanum lycopersicum HOM05D000089 ORTHO05D000104 9.6e-10 68.9 38 84.2
QL06p043952 Quercus lobata HOM05D000395 ORTHO05D000088 1.6e-09 68.2 84 38.1
QL10p039053 Quercus lobata HOM05D000395 ORTHO05D000088 2.8e-09 67.4 83 42.2
Rhsim09G0072000 Rhododendron simsii HOM05D000395 ORTHO05D000088 2.8e-09 67.4 83 39.8
Solyc02g026080.2 Solanum lycopersicum HOM05D008110 ORTHO05D000088 2.8e-09 67.4 81 44.4
Sopen04g036420 Solanum pennellii HOM05D000089 ORTHO05D000104 2.8e-09 67.4 38 81.6
CAN.G241.1 Capsicum annuum HOM05D008110 ORTHO05D000088 3.7e-09 67.0 83 43.4
Sopen02g009350 Solanum pennellii HOM05D008110 ORTHO05D000088 3.7e-09 67.0 81 44.4
RhsimUnG0104500 Rhododendron simsii HOM05D000395 ORTHO05D000088 4.8e-09 66.6 82 40.2
RcHm_v2.0_Chr2g0103401 Rosa chinensis HOM05D000395 ORTHO05D000088 4.8e-09 66.6 95 36.8
Dinv42109 Davidia involucrata HOM05D008110 ORTHO05D000088 1.4e-08 65.1 81 42.0
CiPaw.01G027400 Carya illinoinensis HOM05D000823 ORTHO05D000088 3.1e-08 63.9 84 39.3
Nitab4.5_0010897g0020 Nicotiana tabacum HOM05D000089 ORTHO05D000104 3.1e-08 63.9 39 74.4
Peaxi162Scf00385g00019 Petunia axillaris HOM05D000089 ORTHO05D000104 3.1e-08 63.9 39 76.9
Actinidia17080 Actinidia chinensis HOM05D000089 ORTHO05D000104 5.3e-08 63.2 66 50.0
PGSC0003DMG400045703 Solanum tuberosum HOM05D008110 ORTHO05D000088 5.3e-08 63.2 81 40.7
vmacro04665 Vaccinium macrocarpon HOM05D000823 ORTHO05D000088 5.3e-08 63.2 82 40.2
Dinv26759 Davidia involucrata HOM05D000823 ORTHO05D000088 6.9e-08 62.8 87 40.2
TWI75G0037 Tripterygium wilfordii HOM05D000823 ORTHO05D000088 6.9e-08 62.8 83 37.3
PSO675G8304 Papaver somniferum HOM05D000395 ORTHO05D000088 9.0e-08 62.4 68 45.6
Aqoxy6G00930 Aquilegia oxysepala HOM05D000823 ORTHO05D000088 1.2e-07 62.0 85 37.6
Migut.M00219 Erythranthe guttata HOM05D000823 ORTHO05D000088 1.2e-07 62.0 83 41.0
vmacro21764 Vaccinium macrocarpon HOM05D000089 ORTHO05D000104 1.2e-07 62.0 42 64.3
Nn5g29401 Nelumbo nucifera HOM05D000823 ORTHO05D000088 1.5e-07 61.6 85 37.6
TWI31G0651 Tripterygium wilfordii HOM05D000823 ORTHO05D000088 1.5e-07 61.6 83 34.9
CSS0012563 Camellia sinensis var. sinensis HOM05D000395 ORTHO05D000088 2.0e-07 61.2 83 37.3
Migut.B01167 Erythranthe guttata HOM05D000823 ORTHO05D000088 2.0e-07 61.2 164 27.4
TAR376G0714 Trochodendron aralioides HOM05D000823 ORTHO05D000088 2.0e-07 61.2 80 42.5
TAR381G0348 Trochodendron aralioides HOM05D000823 ORTHO05D000088 2.0e-07 61.2 82 37.8
Nn6g32142 Nelumbo nucifera HOM05D000823 ORTHO05D000088 2.6e-07 60.8 82 39.0
Solyc01g106250.4 Solanum lycopersicum HOM05D008110 ORTHO05D000088 2.6e-07 60.8 81 38.3
Sopen01g048640 Solanum pennellii HOM05D008110 ORTHO05D000088 3.4e-07 60.5 80 36.2
GSVIVG01023108001 Vitis vinifera HOM05D007130 ORTHO05D002078 3.4e-07 60.5 83 42.2
FvH4_7g01780 Fragaria vesca HOM05D000823 ORTHO05D000088 4.5e-07 60.1 68 41.2
FAN06G1437 Fragaria x ananassa HOM05D000823 ORTHO05D000088 4.5e-07 60.1 68 41.2
TAR628G1487 Trochodendron aralioides HOM05D000823 ORTHO05D000088 4.5e-07 60.1 87 35.6
CiPaw.02G012800 Carya illinoinensis HOM05D000823 ORTHO05D000088 5.8e-07 59.7 84 35.7
Eucgr.I01213 Eucalyptus grandis HOM05D008110 ORTHO05D000088 5.8e-07 59.7 82 35.4
Solyc01g108950.3 Solanum lycopersicum HOM05D008110 ORTHO05D000088 5.8e-07 59.7 102 32.4
TAR625G0462 Trochodendron aralioides HOM05D000823 ORTHO05D000088 5.8e-07 59.7 82 37.8
Gorai.009G291200 Gossypium raimondii HOM05D000089 ORTHO05D000104 7.6e-07 59.3 39 66.7
QL11p039199 Quercus lobata HOM05D000823 ORTHO05D000088 7.6e-07 59.3 80 35.0
PGSC0003DMG400010668 Solanum tuberosum HOM05D008110 ORTHO05D000088 7.6e-07 59.3 80 36.2
QL02p015771 Quercus lobata HOM05D000089 ORTHO05D000104 9.9e-07 58.9 66 45.5
QL03p020057 Quercus lobata HOM05D000089 ORTHO05D000104 9.9e-07 58.9 39 64.1
BolC9t54023H Brassica oleracea HOM05D000823 ORTHO05D000088 1.3e-06 58.5 99 39.4
CSS0000969 Camellia sinensis var. sinensis HOM05D000823 ORTHO05D000088 1.3e-06 58.5 81 37.0
CSS0005810 Camellia sinensis var. sinensis HOM05D000395 ORTHO05D000088 1.3e-06 58.5 83 34.9
CSS0025372 Camellia sinensis var. sinensis HOM05D000823 ORTHO05D000088 1.3e-06 58.5 81 37.0
FvH4_7g04060 Fragaria vesca HOM05D000395 ORTHO05D000088 1.3e-06 58.5 83 34.9
FAN06G4820 Fragaria x ananassa HOM05D000395 ORTHO05D000088 1.3e-06 58.5 83 34.9
Nn5g28071 Nelumbo nucifera HOM05D000823 ORTHO05D000088 1.3e-06 58.5 82 35.4
Nn5g29405 Nelumbo nucifera HOM05D000823 ORTHO05D000088 1.3e-06 58.5 82 36.6
QL02p015800 Quercus lobata HOM05D000089 ORTHO05D000104 1.3e-06 58.5 39 64.1
PGSC0003DMG400036386 Solanum tuberosum HOM05D008110 ORTHO05D000088 1.3e-06 58.5 83 37.3
CiPaw.07G133200 Carya illinoinensis HOM05D000089 ORTHO05D000104 1.7e-06 58.2 39 64.1
Ciclev10003684m.g Citrus clementina HOM05D000089 ORTHO05D000104 1.7e-06 58.2 39 64.1
Migut.B01168 Erythranthe guttata HOM05D000823 ORTHO05D000088 1.7e-06 58.2 97 38.1
Glyma.07G026300 Glycine max HOM05D000089 ORTHO05D000104 1.7e-06 58.2 49 55.1
Hma1.2p1_0541F.1_g174830 Hydrangea macrophylla HOM05D000089 ORTHO05D000104 1.7e-06 58.2 39 66.7
Lj7C16T11 Lonicera japonica HOM05D000395 ORTHO05D000088 1.7e-06 58.2 82 35.4
Rhsim10G0125600 Rhododendron simsii HOM05D000823 ORTHO05D000088 1.7e-06 58.2 80 36.2
RcHm_v2.0_Chr2g0103411 Rosa chinensis HOM05D000395 ORTHO05D000088 1.7e-06 58.2 83 33.7
BraA04t18088Z Brassica rapa HOM05D000089 ORTHO05D000104 2.2e-06 57.8 77 41.6
FvH4_5g19930 Fragaria vesca HOM05D000823 ORTHO05D000088 2.2e-06 57.8 83 34.9
Lj4C136T19 Lonicera japonica HOM05D000395 ORTHO05D000088 2.2e-06 57.8 82 40.2
vmacro16013 Vaccinium macrocarpon HOM05D000395 ORTHO05D000088 2.2e-06 57.8 67 40.3
Haze_08008 Corylus avellana HOM05D000823 ORTHO05D000088 2.9e-06 57.4 89 34.8
FvH4_1g14630 Fragaria vesca HOM05D000395 ORTHO05D000088 2.9e-06 57.4 95 34.7
FvH4_7g23440 Fragaria vesca HOM05D000823 ORTHO05D000088 2.9e-06 57.4 68 38.2
FAN03G0739 Fragaria x ananassa HOM05D000823 ORTHO05D000088 2.9e-06 57.4 68 38.2
Medtr1g046200 Medicago truncatula HOM05D010195 ORTHO05D000088 2.9e-06 57.4 83 31.3
Peaxi162Scf00385g00012 Petunia axillaris HOM05D000089 ORTHO05D000104 2.9e-06 57.4 39 69.2
Prupe.1G388200 Prunus persica HOM05D000823 ORTHO05D000088 2.9e-06 57.4 96 33.3
RcHm_v2.0_Chr1g0319011 Rosa chinensis HOM05D000823 ORTHO05D000088 2.9e-06 57.4 85 37.6
RcHm_v2.0_Chr6g0259241 Rosa chinensis HOM05D000823 ORTHO05D000088 2.9e-06 57.4 93 31.2
Sed0022882 Sechium edule HOM05D000823 ORTHO05D000088 2.9e-06 57.4 80 36.2
GSVIVG01013434001 Vitis vinifera HOM05D000089 ORTHO05D000104 2.9e-06 57.4 39 64.1
Atru.chr13.51 Acer truncatum HOM05D000089 ORTHO05D000104 3.8e-06 57.0 48 56.2
A04p25860 Brassica napus HOM05D000089 ORTHO05D000104 3.8e-06 57.0 77 40.3
FAN03G1989 Fragaria x ananassa HOM05D000823 ORTHO05D000088 3.8e-06 57.0 66 40.9
Glyma.08G216200 Glycine max HOM05D000089 ORTHO05D000104 3.8e-06 57.0 67 43.3
Thecc.07G167100 Theobroma cacao HOM05D000089 ORTHO05D000104 3.8e-06 57.0 39 64.1
Thecc.08G099200 Theobroma cacao HOM05D000089 ORTHO05D000104 3.8e-06 57.0 77 42.9
C04p63100 Brassica napus HOM05D000089 ORTHO05D000104 4.9e-06 56.6 77 40.3
BolC4t27785H Brassica oleracea HOM05D000089 ORTHO05D000104 4.9e-06 56.6 77 40.3
CSS0007933 Camellia sinensis var. sinensis HOM05D000089 ORTHO05D000104 4.9e-06 56.6 39 61.5
Carub.0001s1638 Capsella rubella HOM05D006628 ORTHO05D000088 4.9e-06 56.6 78 39.7
COL.COLO4_12295 Corchorus olitorius HOM05D000089 ORTHO05D000104 4.9e-06 56.6 77 40.3
Dinv26761 Davidia involucrata HOM05D000395 ORTHO05D000088 4.9e-06 56.6 68 42.6
FAN03G1401 Fragaria x ananassa HOM05D000395 ORTHO05D000088 4.9e-06 56.6 82 34.1
PSO357G0640 Papaver somniferum HOM05D000823 ORTHO05D000088 4.9e-06 56.6 98 30.6
Sp4g15950 Schrenkiella parvula HOM05D000089 ORTHO05D000104 4.9e-06 56.6 39 64.1
EL10Ac9g21795 Beta vulgaris HOM05D000823 ORTHO05D000088 6.4e-06 56.2 83 33.7
BcaB06g28703 Brassica carinata HOM05D000089 ORTHO05D000104 6.4e-06 56.2 77 40.3
Thhalv10017002m.g Eutrema salsugineum HOM05D000089 ORTHO05D000104 6.4e-06 56.2 39 64.1
FAN08G3323 Fragaria x ananassa HOM05D000823 ORTHO05D000088 6.4e-06 56.2 84 33.3
Gohir.A05G275900 Gossypium hirsutum HOM05D000089 ORTHO05D000104 6.4e-06 56.2 39 64.1
Gohir.D05G277900 Gossypium hirsutum HOM05D000089 ORTHO05D000104 6.4e-06 56.2 39 64.1
Gorai.009G291100 Gossypium raimondii HOM05D000089 ORTHO05D000104 6.4e-06 56.2 39 64.1
Medtr1g046320 Medicago truncatula HOM05D010195 ORTHO05D000088 6.4e-06 56.2 83 32.5
Nn2g15197 Nelumbo nucifera HOM05D000089 ORTHO05D000104 6.4e-06 56.2 66 43.9
PSO170G3350 Papaver somniferum HOM05D000823 ORTHO05D000088 6.4e-06 56.2 82 29.3
Rhsim06G0002900 Rhododendron simsii HOM05D000089 ORTHO05D000104 6.4e-06 56.2 43 60.5
Aqoxy6G00935 Aquilegia oxysepala HOM05D000823 ORTHO05D000088 8.4e-06 55.8 80 35.0
arahy.Tifrunner.gnm1.ann1.946VJC Arachis hypogaea HOM05D000089 ORTHO05D000104 8.4e-06 55.8 35 71.4
arahy.Tifrunner.gnm1.ann1.RP94VE Arachis hypogaea HOM05D000089 ORTHO05D000104 8.4e-06 55.8 28 85.7
CANSAT54G1995 Cannabis sativa HOM05D000089 ORTHO05D000104 8.4e-06 55.8 39 64.1
FvH4_5g14275 Fragaria vesca HOM05D000395 ORTHO05D000088 8.4e-06 55.8 83 32.5
Lsat_1_v5_gn_8_27621 Lactuca sativa HOM05D000089 ORTHO05D000104 8.4e-06 55.8 39 66.7
TWI36G1776 Tripterygium wilfordii HOM05D000089 ORTHO05D000104 8.4e-06 55.8 39 61.5
GSVIVG01013432001 Vitis vinifera HOM05D000089 ORTHO05D000104 8.4e-06 55.8 39 61.5


User provided reference genes

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