Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G919.21 Capsicum annuum HOM05D006704 ORTHO05D008635 1.6e-208 729.2 363 100.0
PGSC0003DMG400007144 Solanum tuberosum HOM05D006704 ORTHO05D008635 6.9e-188 660.6 367 89.1
Solyc06g074380.3 Solanum lycopersicum HOM05D006704 ORTHO05D008635 5.0e-186 654.4 366 91.3
Sopen06g030840 Solanum pennellii HOM05D006704 ORTHO05D008635 5.5e-185 651.0 369 90.5
Nitab4.5_0002002g0020 Nicotiana tabacum HOM05D006704 ORTHO05D008635 2.1e-176 622.5 389 80.5
Nitab4.5_0002002g0030 Nicotiana tabacum HOM05D006704 ORTHO05D008635 2.6e-174 615.5 371 82.7
Nitab4.5_0015718g0010 Nicotiana tabacum HOM05D006704 ORTHO05D008635 1.1e-172 610.1 398 78.1
Peaxi162Scf00091g00118 Petunia axillaris HOM05D006704 ORTHO05D008635 6.1e-160 567.8 365 79.7
Lsat_1_v5_gn_6_40481 Lactuca sativa HOM05D006704 ORTHO05D008635 3.3e-145 518.8 376 69.9
SalBow6G4963 Salvia bowleyana HOM05D006704 ORTHO05D008635 1.4e-143 513.5 394 66.8
Dinv29464 Davidia involucrata HOM05D006704 ORTHO05D008635 2.3e-143 512.7 401 66.8
Hma1.2p1_0305F.1_g119670 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 1.1e-140 503.8 321 75.1
Migut.D02353 Erythranthe guttata HOM05D006704 ORTHO05D008635 5.4e-140 501.5 390 66.7
vmacro03306 Vaccinium macrocarpon HOM05D006704 ORTHO05D008635 7.0e-140 501.1 339 72.0
HanXRQChr12g0364591 Helianthus annuus HOM05D006704 ORTHO05D008635 2.0e-139 499.6 387 66.1
GSVIVG01036154001 Vitis vinifera HOM05D006704 ORTHO05D008635 5.9e-139 498.0 321 74.8
SGA_v2.0_scaffold22G09877 Striga asiatica HOM05D006704 ORTHO05D008635 7.8e-139 497.7 383 66.6
Rhsim13G0110100 Rhododendron simsii HOM05D006704 ORTHO05D008635 6.6e-138 494.6 341 70.7
Cc01_g09380 Coffea canephora HOM05D006704 ORTHO05D008635 1.5e-137 493.4 333 71.2
CSS0007169 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 1.9e-137 493.0 337 73.0
CSS0018673 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 1.9e-137 493.0 337 73.0
ECA233G1041 Erigeron canadensis HOM05D006704 ORTHO05D008635 1.9e-137 493.0 370 68.1
MSTRG.18751 Avicennia marina HOM05D006704 ORTHO05D008635 2.5e-137 492.7 393 64.4
AUR62009778 Chenopodium quinoa HOM05D006704 ORTHO05D008635 4.3e-137 491.9 385 64.4
TWI31G0547 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 2.1e-136 489.6 338 70.1
TAR633G0569 Trochodendron aralioides HOM05D006704 ORTHO05D008635 6.1e-136 488.0 397 62.7
Potri.004G184400 Populus trichocarpa HOM05D006704 ORTHO05D008635 4.0e-135 485.3 331 70.4
DCAR_006157 Daucus carota HOM05D006704 ORTHO05D008635 5.2e-135 485.0 386 63.0
COL.COLO4_19912 Corchorus olitorius HOM05D006704 ORTHO05D008635 3.4e-134 482.3 389 64.3
Lj3g0010910 Lotus japonicus HOM05D006704 ORTHO05D008635 4.4e-134 481.9 387 64.3
PGR119G0959 Punica granatum HOM05D006704 ORTHO05D008635 4.4e-134 481.9 388 64.2
QL01p012560 Quercus lobata HOM05D006704 ORTHO05D008635 1.7e-133 479.9 328 68.9
Manes.11G160500 Manihot esculenta HOM05D006704 ORTHO05D008635 2.2e-133 479.6 330 69.7
AUR62039223 Chenopodium quinoa HOM05D006704 ORTHO05D008635 2.9e-133 479.2 385 64.7
VMungo1127G0699 Vigna mungo HOM05D006704 ORTHO05D008635 2.9e-133 479.2 391 61.9
FvH4_3g24630 Fragaria vesca HOM05D006704 ORTHO05D008635 3.7e-133 478.8 325 71.1
Ah.08g215840 Amaranthus hybridus HOM05D006704 ORTHO05D008635 4.9e-133 478.4 393 61.6
Glyma.11G184500 Glycine max HOM05D006704 ORTHO05D008635 4.9e-133 478.4 398 61.1
EL10Ac7g15806 Beta vulgaris HOM05D006704 ORTHO05D008635 6.4e-133 478.0 398 63.8
CANSAT54G0988 Cannabis sativa HOM05D006704 ORTHO05D008635 1.8e-132 476.5 386 62.4
Medtr4g053410 Medicago truncatula HOM05D006704 ORTHO05D008635 1.8e-132 476.5 389 62.0
RcHm_v2.0_Chr5g0044201 Rosa chinensis HOM05D006704 ORTHO05D008635 1.8e-132 476.5 395 61.8
Ca_19394_v3 Cicer arietinum L. HOM05D006704 ORTHO05D008635 3.2e-132 475.7 405 62.7
TPR.G17210 Trifolium pratense HOM05D006704 ORTHO05D008635 3.2e-132 475.7 394 64.0
Glyma.12G087800 Glycine max HOM05D006704 ORTHO05D008635 4.1e-132 475.3 326 69.3
MD03G1142000 Malus domestica HOM05D006704 ORTHO05D008635 4.1e-132 475.3 392 63.8
Psat7g188440 Pisum sativum HOM05D006704 ORTHO05D008635 4.1e-132 475.3 391 62.1
Aqoxy2G01240 Aquilegia oxysepala HOM05D006704 ORTHO05D008635 5.4e-132 474.9 324 68.5
Ciclev10028571m.g Citrus clementina HOM05D006704 ORTHO05D008635 1.6e-131 473.4 333 68.2
arahy.Tifrunner.gnm1.ann1.GMPU9C Arachis hypogaea HOM05D006704 ORTHO05D008635 3.5e-131 472.2 325 70.2
BcaC02g08239 Brassica carinata HOM05D006704 ORTHO05D008635 3.5e-131 472.2 367 62.7
C04p56860 Brassica napus HOM05D006704 ORTHO05D008635 3.5e-131 472.2 367 62.7
Gorai.009G086600 Gossypium raimondii HOM05D006704 ORTHO05D008635 4.6e-131 471.9 325 68.9
Sabra04G0124100 Salix brachista HOM05D006704 ORTHO05D008635 4.6e-131 471.9 331 68.0
Thecc.09G286000 Theobroma cacao HOM05D006704 ORTHO05D008635 6.0e-131 471.5 389 64.3
BolC4t27219H Brassica oleracea HOM05D006704 ORTHO05D008635 1.3e-130 470.3 368 63.6
Gohir.A05G081700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 1.3e-130 470.3 323 69.3
MELO3C004818.2 Cucumis melo HOM05D006704 ORTHO05D008635 1.7e-130 469.9 330 69.1
Phvul.011G092800 Phaseolus vulgaris HOM05D006704 ORTHO05D008635 1.7e-130 469.9 332 68.4
Hund20877 Selenicereus undatus HOM05D006704 ORTHO05D008635 1.7e-130 469.9 390 64.6
Eucgr.I00893 Eucalyptus grandis HOM05D006704 ORTHO05D008635 3.0e-130 469.2 393 62.8
AL4G22810 Arabidopsis lyrata HOM05D006704 ORTHO05D008635 3.9e-130 468.8 325 69.2
Duzib170G0143 Durio zibethinus HOM05D006704 ORTHO05D008635 3.9e-130 468.8 393 63.1
arahy.Tifrunner.gnm1.ann1.JHI8LQ Arachis hypogaea HOM05D006704 ORTHO05D008635 6.6e-130 468.0 400 63.0
CsaV3_1G014420 Cucumis sativus L. HOM05D006704 ORTHO05D008635 1.5e-129 466.8 392 62.0
Gohir.D05G084700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 1.5e-129 466.8 325 68.3
Sed0027356 Sechium edule HOM05D006704 ORTHO05D008635 1.5e-129 466.8 330 68.5
ClCG01G012900 Citrullus lanatus HOM05D006704 ORTHO05D008635 1.9e-129 466.5 329 68.7
Sp4g10410 Schrenkiella parvula HOM05D006704 ORTHO05D008635 2.5e-129 466.1 371 62.8
BcaB06g28156 Brassica carinata HOM05D006704 ORTHO05D008635 5.6e-129 464.9 367 63.8
Lalb_Chr03g0028021 Lupinus albus HOM05D006704 ORTHO05D008635 5.6e-129 464.9 396 60.9
CARHR121470 Cardamine hirsuta HOM05D006704 ORTHO05D008635 1.2e-128 463.8 318 68.9
AT2G27590 Arabidopsis thaliana HOM05D006704 ORTHO05D008635 2.1e-128 463.0 374 64.2
Carub.0004s0825 Capsella rubella HOM05D006704 ORTHO05D008635 2.8e-128 462.6 368 63.6
Atru.chr3.3296 Acer truncatum HOM05D006704 ORTHO05D008635 3.6e-128 462.2 393 63.9
FAN11G2081 Fragaria x ananassa HOM05D006704 ORTHO05D008635 4.7e-128 461.8 316 69.9
Aa31LG5G8320 Aethionema arabicum HOM05D006704 ORTHO05D008635 6.2e-128 461.5 319 67.4
Cfa010042 Carpinus fangiana HOM05D006704 ORTHO05D008635 1.1e-127 460.7 323 68.7
Thhalv10016700m.g Eutrema salsugineum HOM05D006704 ORTHO05D008635 1.4e-127 460.3 320 69.1
BraA04t17672Z Brassica rapa HOM05D006704 ORTHO05D008635 1.8e-127 459.9 368 64.9
FAN21G3586 Fragaria x ananassa HOM05D006704 ORTHO05D008635 1.8e-127 459.9 312 70.8
A04p21040 Brassica napus HOM05D006704 ORTHO05D008635 4.0e-127 458.8 368 64.4
Nn6g34957 Nelumbo nucifera HOM05D006704 ORTHO05D008635 1.5e-126 456.8 387 62.5
THA.LOC104800539 Tarenaya hassleriana HOM05D006704 ORTHO05D008635 2.0e-126 456.4 398 60.3
unitig_37.g12893 Utricularia gibba HOM05D006704 ORTHO05D008635 2.0e-126 456.4 377 61.0
CDE06G2417 Ceratophyllum demersum HOM05D006704 ORTHO05D008635 2.2e-125 453.0 377 58.9
PSO339G4200 Papaver somniferum HOM05D006704 ORTHO05D008635 4.1e-124 448.7 327 65.7
MBI17_g08127_MAGBIO Magnolia biondii HOM05D006704 ORTHO05D008635 7.8e-123 444.5 331 64.7
PSO384G3226 Papaver somniferum HOM05D006704 ORTHO05D008635 3.9e-122 442.2 333 63.7
Lj2A980T13 Lonicera japonica HOM05D006704 ORTHO05D008635 5.0e-122 441.8 312 67.3
CiPaw.13G137600 Carya illinoinensis HOM05D006704 ORTHO05D008635 6.2e-120 434.9 378 62.2
Sc12g0004410 Simmondsia chinensis HOM05D006704 ORTHO05D008635 1.2e-118 430.6 292 68.5
Os01g0858700 Oryza sativa ssp. japonica HOM05D006704 ORTHO05D008635 1.6e-115 420.2 321 62.3
Zm00001eb147310 Zea mays HOM05D006704 ORTHO05D008635 2.3e-114 416.4 399 53.9
HPP92_000003 Vanilla planifolia HOM05D006704 ORTHO05D008635 3.3e-113 412.5 316 64.9
Haze_23402 Corylus avellana HOM05D006704 ORTHO05D008635 4.3e-113 412.1 434 51.2
Prupe.6G127300 Prunus persica HOM05D006704 ORTHO05D008635 1.9e-108 396.7 277 69.3
ATR0820G138 Amborella trichopoda HOM05D006704 ORTHO05D008635 2.4e-108 396.4 300 63.7
SEGI_32150 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 2.4e-103 379.8 392 52.3
Cpa.g.sc32.105 Carica papaya HOM05D006704 ORTHO05D008635 5.1e-98 362.1 322 58.7
Actinidia07237 Actinidia chinensis HOM05D006704 ORTHO05D008635 4.0e-95 352.4 336 55.7
Mapoly0047s0027 Marchantia polymorpha HOM05D006704 ORTHO05D008635 4.9e-93 345.5 323 52.6
AagrBONN_evm.TU.Sc2ySwM_228.5549 Anthoceros agrestis HOM05D006704 ORTHO05D008635 2.4e-92 343.2 380 47.9
SMO079G0003 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 7.1e-92 341.7 296 55.4
FAN16G1713 Fragaria x ananassa HOM05D006704 ORTHO05D008635 1.2e-91 340.9 248 66.9
SMO200G0095 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 1.2e-91 340.9 296 55.1
Hma1.2p1_0305F.1_g119660 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 8.7e-82 308.1 230 66.1
Oeu031485.1 Olea europaea HOM05D006704 ORTHO05D008635 4.4e-41 172.9 383 35.2
TWI79G0085 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 1.6e-38 164.5 99 71.7
MD03G1142200 Malus domestica HOM05D006704 ORTHO05D008635 6.8e-34 149.1 92 75.0
VMungo0464G0466 Vigna mungo HOM05D006704 ORTHO05D000044 2.6e-25 120.6 68 76.5
Migut.D01870 Erythranthe guttata HOM05D006704 ORTHO05D008635 4.9e-24 116.3 255 31.8
Actinidia24205 Actinidia chinensis HOM05D006704 ORTHO05D008635 9.2e-23 112.1 65 73.8
Cpa.g.sc32.104 Carica papaya HOM05D006704 ORTHO05D008635 4.5e-22 109.8 77 63.6
Cfa010043 Carpinus fangiana HOM05D006704 ORTHO05D008635 4.1e-15 86.7 49 83.7
SEGI_14445 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 4.6e-14 83.2 112 49.1
QL02p006829 Quercus lobata HOM05D006704 ORTHO05D004198 7.3e-12 75.9 53 67.9
MD11G1162700 Malus domestica HOM05D006704 ORTHO05D008635 8.9e-10 68.9 128 34.4


User provided reference genes

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