Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G91.9 Capsicum annuum HOM05D001033 ORTHO05D004888 5.3e-92 340.9 159 100.0
CAN.G219.25 Capsicum annuum HOM05D001033 ORTHO05D004888 1.5e-81 306.2 159 89.3
Peaxi162Scf00334g00124 Petunia axillaris HOM05D001033 ORTHO05D004888 7.2e-81 303.9 159 88.7
Solyc00g500061.1 Solanum lycopersicum HOM05D001033 ORTHO05D004888 2.7e-80 302.0 159 88.1
Migut.D01427 Erythranthe guttata HOM05D001033 ORTHO05D004888 1.4e-79 299.7 159 87.4
CAN.G1183.6 Capsicum annuum HOM05D001033 ORTHO05D004888 3.9e-79 298.1 159 86.8
unitig_91.g26504 Utricularia gibba HOM05D001033 ORTHO05D004888 1.1e-78 296.6 159 85.5
SalBow1G1376 Salvia bowleyana HOM05D001033 ORTHO05D004888 1.5e-78 296.2 159 86.2
Hma1.2p1_2223F.1_g317410 Hydrangea macrophylla HOM05D001033 ORTHO05D004888 2.0e-78 295.8 159 86.8
Nn021s41548 Nelumbo nucifera HOM05D001033 ORTHO05D004888 3.3e-78 295.0 159 84.9
DCAR_032487 Daucus carota HOM05D001033 ORTHO05D004888 1.7e-77 292.7 159 84.3
COL.COLO4_03102 Corchorus olitorius HOM05D001033 ORTHO05D004888 3.7e-77 291.6 159 84.3
RcHm_v2.0_CPg0502181 Rosa chinensis HOM05D001033 ORTHO05D004888 3.7e-77 291.6 159 84.9
CAN.G170.11 Capsicum annuum HOM05D001033 ORTHO05D004888 6.3e-77 290.8 159 84.3
Gohir.1Z049399 Gossypium hirsutum HOM05D001033 ORTHO05D004888 8.2e-77 290.4 159 84.3
Gohir.A09G102100 Gossypium hirsutum HOM05D001033 ORTHO05D004888 8.2e-77 290.4 159 84.3
PSO548G0080 Papaver somniferum HOM05D001033 ORTHO05D004888 8.2e-77 290.4 159 83.6
Ah.10g027550 Amaranthus hybridus HOM05D001033 ORTHO05D004888 1.1e-76 290.0 159 84.3
Gohir.D03G073392 Gossypium hirsutum HOM05D001033 ORTHO05D004888 1.8e-76 289.3 159 83.6
HanXRQChr10g0285321 Helianthus annuus HOM05D001033 ORTHO05D004888 1.8e-76 289.3 159 84.3
Medtr4g035040 Medicago truncatula HOM05D001033 ORTHO05D004888 1.8e-76 289.3 159 83.6
Medtr7g021800 Medicago truncatula HOM05D001033 ORTHO05D004888 1.8e-76 289.3 159 83.6
EL10As12g24022 Beta vulgaris HOM05D001033 ORTHO05D004888 3.1e-76 288.5 159 83.6
EL10As1g23049 Beta vulgaris HOM05D001033 ORTHO05D004888 3.1e-76 288.5 159 83.6
HanXRQChr00c0345g0573891 Helianthus annuus HOM05D001033 ORTHO05D004888 3.1e-76 288.5 159 84.3
HanXRQChr00c0702g0576871 Helianthus annuus HOM05D001033 ORTHO05D004888 3.1e-76 288.5 159 84.3
HanXRQChr02g0044951 Helianthus annuus HOM05D001033 ORTHO05D004888 3.1e-76 288.5 159 84.3
HanXRQChr07g0201011 Helianthus annuus HOM05D001033 ORTHO05D004888 3.1e-76 288.5 159 84.3
HanXRQChr08g0210301 Helianthus annuus HOM05D001033 ORTHO05D004888 3.1e-76 288.5 159 84.3
HanXRQChr10g0283491 Helianthus annuus HOM05D001033 ORTHO05D004888 3.1e-76 288.5 159 84.3
HanXRQChr10g0289211 Helianthus annuus HOM05D001033 ORTHO05D004888 3.1e-76 288.5 159 84.3
HanXRQChr10g0303781 Helianthus annuus HOM05D001033 ORTHO05D004888 3.1e-76 288.5 159 84.3
HanXRQChr11g0326761 Helianthus annuus HOM05D001033 ORTHO05D004888 3.1e-76 288.5 159 84.3
HanXRQCPg0579971 Helianthus annuus HOM05D001033 ORTHO05D004888 3.1e-76 288.5 159 84.3
Lalb_Chr07g0192281 Lupinus albus HOM05D001033 ORTHO05D004888 3.1e-76 288.5 159 84.3
PGR111G0105 Punica granatum HOM05D001033 ORTHO05D004888 3.1e-76 288.5 159 83.6
Lj4g0025955 Lotus japonicus HOM05D001033 ORTHO05D004888 5.3e-76 287.7 159 83.0
Lsat_1_v5_gn_3_99221 Lactuca sativa HOM05D001033 ORTHO05D004888 7.0e-76 287.3 157 85.4
Lsat_1_v5_gn_3_99300 Lactuca sativa HOM05D001033 ORTHO05D004888 7.0e-76 287.3 157 85.4
Lsat_1_v5_gn_4_40440 Lactuca sativa HOM05D001033 ORTHO05D004888 7.0e-76 287.3 157 85.4
Lalb_Chr20g0115661 Lupinus albus HOM05D001033 ORTHO05D004888 7.0e-76 287.3 159 83.6
LjContig00318g0025596 Lotus japonicus HOM05D001033 ORTHO05D004888 9.1e-76 287.0 159 83.0
Potri.013G163200 Populus trichocarpa HOM05D001033 ORTHO05D004888 1.2e-75 286.6 160 83.1
HanXRQChr02g0041501 Helianthus annuus HOM05D001033 ORTHO05D004888 3.5e-75 285.0 159 83.6
QL93p0270_0002 Quercus lobata HOM05D001033 ORTHO05D004888 5.9e-75 284.3 158 82.9
VMungo0498G0002 Vigna mungo HOM05D001033 ORTHO05D004888 1.0e-74 283.5 159 81.1
Eucgr.A02747 Eucalyptus grandis HOM05D001033 ORTHO05D004888 5.0e-74 281.2 158 81.0
Phvul.011G056548 Phaseolus vulgaris HOM05D001033 ORTHO05D004888 5.0e-74 281.2 159 80.5
TWI36G0295 Tripterygium wilfordii HOM05D001033 ORTHO05D004888 7.2e-73 277.3 159 81.1
Sc19g0006000 Simmondsia chinensis HOM05D001033 ORTHO05D004888 1.2e-72 276.6 157 81.5
ATCG00420 Arabidopsis thaliana HOM05D001033 ORTHO05D004888 8.0e-72 273.9 159 79.2
BNapus_Darmor_BZH_scaffold_253p00160 Brassica napus HOM05D001033 ORTHO05D004888 8.0e-72 273.9 159 79.2
BNapus_Darmor_BZH_scaffold_287p00080 Brassica napus HOM05D001033 ORTHO05D004888 8.0e-72 273.9 159 79.2
C02p43470 Brassica napus HOM05D001033 ORTHO05D004888 8.0e-72 273.9 159 79.2
C09p40480 Brassica napus HOM05D001033 ORTHO05D004888 8.0e-72 273.9 159 79.2
BolSC45t60947H Brassica oleracea HOM05D001033 ORTHO05D004888 8.0e-72 273.9 159 79.2
BolSC46t61041H Brassica oleracea HOM05D001033 ORTHO05D004888 8.0e-72 273.9 159 79.2
BolSC47t61103H Brassica oleracea HOM05D001033 ORTHO05D004888 8.0e-72 273.9 159 79.2
BraSC25t45841Z Brassica rapa HOM05D001033 ORTHO05D004888 8.0e-72 273.9 159 79.2
BraSC25t45874Z Brassica rapa HOM05D001033 ORTHO05D004888 8.0e-72 273.9 159 79.2
BraSC58t46413Z Brassica rapa HOM05D001033 ORTHO05D004888 8.0e-72 273.9 159 79.2
BraSC58t46484Z Brassica rapa HOM05D001033 ORTHO05D004888 8.0e-72 273.9 159 79.2
CSS0012650 Camellia sinensis var. sinensis HOM05D001033 ORTHO05D004888 5.2e-71 271.2 159 81.8
AL2G21460 Arabidopsis lyrata HOM05D001033 ORTHO05D004888 8.8e-71 270.4 159 78.0
BolSC45t60865H Brassica oleracea HOM05D001033 ORTHO05D004888 8.8e-71 270.4 159 78.6
BolSC29t60582H Brassica oleracea HOM05D001033 ORTHO05D004888 2.6e-70 268.9 159 78.0
Medtr0002s0630 Medicago truncatula HOM05D001033 ORTHO05D004888 5.7e-70 267.7 158 77.2
HanXRQChr15g0480701 Helianthus annuus HOM05D001033 ORTHO05D004888 1.7e-69 266.2 151 81.5
CARHR282040 Cardamine hirsuta HOM05D001033 ORTHO05D004888 3.7e-69 265.0 154 79.2
Ah.09g227310 Amaranthus hybridus HOM05D001033 ORTHO05D004888 1.4e-68 263.1 142 85.2
A06p23250 Brassica napus HOM05D001033 ORTHO05D004888 2.4e-68 262.3 159 76.1
Sed0001763 Sechium edule HOM05D001033 ORTHO05D004888 9.1e-68 260.4 144 82.6
SEGI_35798 Sequoiadendron giganteum HOM05D001033 ORTHO05D004888 1.6e-67 259.6 159 73.6
Gorai.001G177200 Gossypium raimondii HOM05D001033 ORTHO05D004888 1.7e-66 256.1 143 83.2
Sed0011576 Sechium edule HOM05D001033 ORTHO05D004888 5.5e-65 251.1 144 80.6
Sed0015951 Sechium edule HOM05D000680 ORTHO05D000738 5.5e-65 251.1 144 80.6
Sed0016230 Sechium edule HOM05D001033 ORTHO05D004888 5.5e-65 251.1 144 80.6
Gohir.D01G102242 Gossypium hirsutum HOM05D001033 ORTHO05D004888 1.8e-63 246.1 159 74.2
ATR0303G003 Amborella trichopoda HOM05D001033 ORTHO05D004888 2.0e-62 242.7 139 81.3
Solyc00g500142.1 Solanum lycopersicum HOM05D001033 ORTHO05D004888 7.5e-62 240.7 134 84.3
AL2G20710 Arabidopsis lyrata HOM05D001033 ORTHO05D004888 6.3e-61 237.7 159 71.1
BraA06t25427Z Brassica rapa HOM05D001033 ORTHO05D004888 5.4e-60 234.6 148 74.3
Gohir.D07G155032 Gossypium hirsutum HOM05D001033 ORTHO05D004888 5.4e-60 234.6 139 79.9
Thhalv10010993m.g Eutrema salsugineum HOM05D001033 ORTHO05D004888 1.5e-57 226.5 159 68.6
Nitab4.5_0001841g0030 Nicotiana tabacum HOM05D001033 ORTHO05D004888 7.2e-57 224.2 132 79.5
BolSC46t60994H Brassica oleracea HOM05D001033 ORTHO05D004888 1.6e-56 223.0 159 67.3
Nn071s42392 Nelumbo nucifera HOM05D001033 ORTHO05D004888 1.6e-56 223.0 146 73.3
FAN19G1182 Fragaria x ananassa HOM05D001033 ORTHO05D004888 4.7e-56 221.5 159 68.6
Sed0007524 Sechium edule HOM05D000680 ORTHO05D000738 1.0e-55 220.3 144 73.6
BolC9t55818H Brassica oleracea HOM05D001033 ORTHO05D004888 1.4e-55 219.9 159 66.7
Gohir.D07G099350 Gossypium hirsutum HOM05D001033 ORTHO05D004888 1.8e-55 219.5 134 77.6
EL10As5g23626 Beta vulgaris HOM05D001033 ORTHO05D004888 7.0e-52 207.6 117 82.1
Nitab4.5_0001761g0190 Nicotiana tabacum HOM05D001033 ORTHO05D004888 2.9e-50 202.2 112 83.9
Lalb_Chr07g0192231 Lupinus albus HOM05D001033 ORTHO05D004888 1.1e-49 200.3 135 71.9
Gorai.005G187900 Gossypium raimondii HOM05D001033 ORTHO05D004888 1.9e-49 199.5 139 66.9
EL10Ac9g20715 Beta vulgaris HOM05D001033 ORTHO05D004888 3.6e-48 195.3 136 69.9
SGA_v2.0_scaffold781G53594 Striga asiatica HOM05D001033 ORTHO05D004888 8.0e-48 194.1 163 64.4
EL10As15g24143 Beta vulgaris HOM05D001033 ORTHO05D004888 2.3e-47 192.6 158 62.0
SMO086G0027 Selaginella moellendorffii HOM05D001033 ORTHO05D004888 2.3e-47 192.6 159 58.5
SMO086G0049 Selaginella moellendorffii HOM05D001033 ORTHO05D004888 2.3e-47 192.6 159 58.5
SMO233G0001 Selaginella moellendorffii HOM05D001033 ORTHO05D004888 2.3e-47 192.6 159 58.5
Lj2C1237T30 Lonicera japonica HOM05D001033 ORTHO05D004888 1.7e-45 186.4 100 86.0
Lj2C1239T58 Lonicera japonica HOM05D001033 ORTHO05D004888 1.7e-45 186.4 100 86.0
Lj2C1239T8 Lonicera japonica HOM05D001033 ORTHO05D004888 1.7e-45 186.4 100 86.0
Gorai.001G107100 Gossypium raimondii HOM05D001033 ORTHO05D004888 8.3e-45 184.1 134 68.7
Duzib192G0593 Durio zibethinus HOM05D001033 ORTHO05D004888 7.0e-44 181.0 100 83.0
Migut.D01354 Erythranthe guttata HOM05D001033 ORTHO05D004888 1.6e-43 179.9 110 79.1
Gohir.A09G102850 Gossypium hirsutum HOM05D001033 ORTHO05D004888 1.6e-43 179.9 101 84.2
C02p28640 Brassica napus HOM05D001033 ORTHO05D004888 2.0e-43 179.5 107 76.6
BolC2t08910H Brassica oleracea HOM05D001033 ORTHO05D004888 2.0e-43 179.5 107 76.6
vmacro22414 Vaccinium macrocarpon HOM05D001033 ORTHO05D004888 4.6e-43 178.3 105 81.0
Nitab4.5_0005412g0030 Nicotiana tabacum HOM05D001033 ORTHO05D004888 7.8e-43 177.6 111 75.7
PSO302G0237 Papaver somniferum HOM05D001033 ORTHO05D004888 6.6e-42 174.5 102 79.4
Prupe.1G270900 Prunus persica HOM05D001033 ORTHO05D004888 6.6e-42 174.5 95 84.2
MBI06_g39081_MAGBIO Magnolia biondii HOM05D001033 ORTHO05D004888 4.3e-41 171.8 102 75.5
PGSC0003DMG400002651 Solanum tuberosum HOM05D001033 ORTHO05D004888 2.8e-40 169.1 92 84.8
Nn1g03019 Nelumbo nucifera HOM05D001033 ORTHO05D004888 4.0e-39 165.2 150 64.7
Lsat_1_v5_gn_2_5601 Lactuca sativa HOM05D001033 ORTHO05D004888 6.8e-39 164.5 101 76.2
SEGI_19633 Sequoiadendron giganteum HOM05D000580 ORTHO05D001362 6.8e-39 164.5 108 68.5
Gorai.009G225200 Gossypium raimondii HOM05D001033 ORTHO05D004888 2.6e-38 162.5 109 74.3
BolC7t41665H Brassica oleracea HOM05D001033 ORTHO05D004888 7.5e-38 161.0 101 73.3
CAN.G386.17 Capsicum annuum HOM05D000388 ORTHO05D004888 1.3e-37 160.2 83 88.0
Peaxi162Scf00110g00002 Petunia axillaris HOM05D001033 ORTHO05D004888 6.4e-37 157.9 83 86.7
Gohir.D05G218250 Gossypium hirsutum HOM05D001033 ORTHO05D004888 2.4e-36 156.0 109 70.6
arahy.Tifrunner.gnm1.ann1.XVSZ20 Arachis hypogaea HOM05D001033 ORTHO05D004888 3.2e-36 155.6 116 65.5
Oeu062837.1 Olea europaea HOM05D001033 ORTHO05D004888 7.1e-36 154.5 100 76.0
arahy.Tifrunner.gnm1.ann1.WN69VX Arachis hypogaea HOM05D001033 ORTHO05D004888 2.7e-35 152.5 83 83.1
DCAR_022590 Daucus carota HOM05D013260 ORTHO05D004888 2.3e-34 149.4 84 81.0
BolSC29t60459H Brassica oleracea HOM05D001033 ORTHO05D004888 3.0e-34 149.1 87 78.2
CAN.G100.48 Capsicum annuum HOM05D001033 ORTHO05D004888 8.6e-34 147.5 78 85.9
unitig_87.g27944 Utricularia gibba HOM05D000388 ORTHO05D004888 8.6e-34 147.5 86 76.7
Haze_27536 Corylus avellana HOM05D001033 ORTHO05D004888 1.5e-33 146.7 83 80.7
arahy.Tifrunner.gnm1.ann1.GNV4IL Arachis hypogaea HOM05D001033 ORTHO05D004888 3.3e-33 145.6 90 74.4
PGSC0003DMG400019224 Solanum tuberosum HOM05D001033 ORTHO05D004888 3.6e-32 142.1 92 70.7
MELO3C029536.2 Cucumis melo HOM05D001033 ORTHO05D004888 4.7e-32 141.7 83 77.1
Nitab4.5_0011099g0060 Nicotiana tabacum HOM05D001033 ORTHO05D004888 2.3e-31 139.4 78 83.3
EL10Ac4g08633 Beta vulgaris HOM05D001033 ORTHO05D004888 5.2e-31 138.3 81 80.2
SEGI_38193 Sequoiadendron giganteum HOM05D001033 ORTHO05D004888 3.4e-30 135.6 84 73.8
SEGI_08348 Sequoiadendron giganteum HOM05D001033 ORTHO05D004888 9.9e-30 134.0 83 73.5
RcHm_v2.0_Chr7g0209391 Rosa chinensis HOM05D001033 ORTHO05D004888 2.2e-29 132.9 71 84.5
SEGI_20198 Sequoiadendron giganteum HOM05D001033 ORTHO05D004888 2.9e-29 132.5 83 72.3
Lalb_Chr03g0039371 Lupinus albus HOM05D001033 ORTHO05D004888 3.7e-29 132.1 68 88.2
Sed0002731 Sechium edule HOM05D001033 ORTHO05D004888 3.0e-26 122.5 124 53.2
HanXRQChr09g0274591 Helianthus annuus HOM05D001033 ORTHO05D004888 8.6e-26 120.9 65 84.6
Gohir.A10G200850 Gossypium hirsutum HOM05D001033 ORTHO05D004888 2.4e-23 112.8 59 83.1
Nn055s41942 Nelumbo nucifera HOM05D001033 ORTHO05D004888 2.4e-23 112.8 57 87.7
Solyc01g017420.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.3e-21 107.1 78 62.8
HanXRQChr17g0559251 Helianthus annuus HOM05D001033 ORTHO05D004888 3.8e-21 105.5 59 81.4
Lalb_Chr03g0030861 Lupinus albus HOM05D001033 ORTHO05D004888 9.3e-20 100.9 54 85.2
Solyc01g056470.1 Solanum lycopersicum HOM05D000890 ORTHO05D004888 8.7e-18 94.4 99 48.5
BolSC35t60639H Brassica oleracea HOM05D001033 ORTHO05D004888 1.9e-17 93.2 53 77.4
TAR633G0438 Trochodendron aralioides HOM05D001033 ORTHO05D004888 4.3e-17 92.0 58 70.7
ClCG07G012530 Citrullus lanatus HOM05D001033 ORTHO05D004888 1.3e-16 90.5 55 72.7
TPR.G37622 Trifolium pratense HOM05D001033 ORTHO05D004888 2.8e-16 89.4 50 80.0
C09p29570 Brassica napus HOM05D001033 ORTHO05D004888 3.1e-15 85.9 43 86.0
Lalb_Chr23g0274161 Lupinus albus HOM05D001033 ORTHO05D004888 3.1e-15 85.9 53 75.5
EL10Ac5g11368 Beta vulgaris HOM05D001033 ORTHO05D004888 1.3e-13 80.5 48 79.2
Phvul.005G068600 Phaseolus vulgaris HOM05D001033 ORTHO05D004888 4.9e-13 78.6 82 48.8
MELO3C034226.2 Cucumis melo HOM05D001033 ORTHO05D004888 6.6e-10 68.2 51 64.7
ClCG00G002680 Citrullus lanatus HOM05D001033 ORTHO05D004888 1.1e-09 67.4 40 72.5
Lalb_Chr03g0030871 Lupinus albus HOM05D001033 ORTHO05D004888 2.1e-08 63.2 30 93.3
Nitab4.5_0007578g0070 Nicotiana tabacum HOM05D012508 ORTHO05D011743 1.8e-07 60.1 60 58.3
TAR338G0003 Trochodendron aralioides HOM05D001033 ORTHO05D004888 1.8e-07 60.1 39 66.7
AUR62014217 Chenopodium quinoa HOM05D001033 ORTHO05D002045 3.1e-07 59.3 40 65.0
Thhalv10002997m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 7.6e-06 54.7 96 33.3


User provided reference genes

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