Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G908.5 Capsicum annuum HOM05D003617 ORTHO05D010478 7.3e-59 230.3 115 100.0
CAN.G1329.39 Capsicum annuum HOM05D003617 ORTHO05D010478 4.3e-43 177.9 113 81.4
CAN.G1658.3 Capsicum annuum HOM05D003617 ORTHO05D010478 4.3e-43 177.9 113 81.4
CAN.G1445.3 Capsicum annuum HOM05D003617 ORTHO05D010478 1.3e-42 176.4 113 78.8
CAN.G626.1 Capsicum annuum HOM05D003617 ORTHO05D010478 6.2e-42 174.1 114 77.2
CAN.G275.8 Capsicum annuum HOM05D003617 ORTHO05D010478 3.1e-41 171.8 111 80.2
CAN.G735.4 Capsicum annuum HOM05D003617 ORTHO05D010478 5.8e-40 167.5 113 77.0
CAN.G67.13 Capsicum annuum HOM05D003617 ORTHO05D010478 1.1e-38 163.3 113 75.2
CAN.G108.23 Capsicum annuum HOM05D003617 ORTHO05D010478 2.4e-38 162.2 113 74.3
CAN.G135.3 Capsicum annuum HOM05D003617 ORTHO05D010478 6.0e-37 157.5 103 77.7
CAN.G1323.7 Capsicum annuum HOM05D003617 ORTHO05D010478 1.3e-36 156.4 101 80.2
CAN.G626.3 Capsicum annuum HOM05D003617 ORTHO05D010478 3.0e-36 155.2 101 79.2
PGSC0003DMG400044879 Solanum tuberosum HOM05D000995 ORTHO05D001773 6.9e-33 144.1 109 66.1
PGSC0003DMG400045242 Solanum tuberosum HOM05D003617 ORTHO05D010478 2.0e-32 142.5 111 67.6
PGSC0003DMG400012065 Solanum tuberosum HOM05D003617 ORTHO05D010478 2.6e-32 142.1 110 66.4
PGSC0003DMG400042344 Solanum tuberosum HOM05D000995 ORTHO05D010478 3.4e-32 141.7 110 64.5
Sopen11g010720 Solanum pennellii HOM05D003617 ORTHO05D007165 2.2e-31 139.0 110 65.5
Sopen12g026610 Solanum pennellii HOM05D003617 ORTHO05D010478 4.2e-30 134.8 110 61.8
PGSC0003DMG400044625 Solanum tuberosum HOM05D003617 ORTHO05D010478 5.5e-30 134.4 110 64.5
Sopen05g021300 Solanum pennellii HOM05D000995 ORTHO05D012246 1.0e-28 130.2 110 60.9
PGSC0003DMG400042314 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.8e-28 129.4 107 61.7
Sopen05g012010 Solanum pennellii HOM05D000002 ORTHO05D010478 3.9e-28 128.3 110 60.0
PGSC0003DMG400044334 Solanum tuberosum HOM05D003617 ORTHO05D010478 3.9e-28 128.3 111 60.4
PGSC0003DMG400046252 Solanum tuberosum HOM05D000995 ORTHO05D010478 6.7e-28 127.5 110 62.7
PGSC0003DMG400039284 Solanum tuberosum HOM05D003617 ORTHO05D010478 5.7e-27 124.4 109 60.6
CAN.G587.67 Capsicum annuum HOM05D003617 ORTHO05D010478 4.8e-26 121.3 79 77.2
Nitab4.5_0000423g0050 Nicotiana tabacum HOM05D003617 ORTHO05D010478 6.3e-26 120.9 113 57.5
Nitab4.5_0000109g0010 Nicotiana tabacum HOM05D000995 ORTHO05D010478 8.2e-26 120.6 112 54.5
Nitab4.5_0004315g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.0e-24 115.9 109 56.0
Nitab4.5_0001101g0020 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.9e-23 112.1 105 56.2
Nitab4.5_0002555g0010 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.1e-22 110.2 93 62.4
Peaxi162Scf00466g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 1.4e-22 109.8 110 51.8
PGSC0003DMG400043386 Solanum tuberosum HOM05D003617 ORTHO05D010478 2.5e-22 109.0 89 64.0
Nitab4.5_0000300g0220 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.5e-22 107.8 94 60.6
Sopen02g010350 Solanum pennellii HOM05D003617 ORTHO05D010478 7.2e-22 107.5 110 54.5
PGSC0003DMG400023003 Solanum tuberosum HOM05D000995 ORTHO05D000638 7.2e-22 107.5 84 65.5
Nitab4.5_0001586g0180 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.2e-21 106.7 93 59.1
Nitab4.5_0017311g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.6e-21 106.3 93 59.1
Nitab4.5_0022539g0020 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.6e-21 106.3 94 58.5
Nitab4.5_0003317g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.1e-21 105.9 92 59.8
Nitab4.5_0001995g0050 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.7e-21 105.5 109 49.5
Nitab4.5_0022539g0010 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.7e-21 105.5 86 60.5
Nitab4.5_0008204g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 4.6e-21 104.8 105 55.2
Nitab4.5_0005533g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.1e-21 104.4 84 61.9
Nitab4.5_0024231g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.8e-20 102.8 91 58.2
Nitab4.5_0000836g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.5e-19 99.8 83 60.2
Nitab4.5_0003882g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.5e-19 99.8 93 57.0
Sopen01g028500 Solanum pennellii HOM05D003617 ORTHO05D000001 1.5e-19 99.8 116 47.4
Nitab4.5_0001081g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 9.7e-19 97.1 83 59.0
Nitab4.5_0003317g0020 Nicotiana tabacum HOM05D003617 ORTHO05D010478 9.7e-19 97.1 86 57.0
Nitab4.5_0002671g0080 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.6e-18 96.3 93 55.9
Nitab4.5_0005492g0060 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.6e-18 96.3 83 59.0
Nitab4.5_0004914g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.2e-18 95.9 93 54.8
Nitab4.5_0006184g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.8e-18 94.7 83 57.8
PGSC0003DMG400003176 Solanum tuberosum HOM05D003617 ORTHO05D010478 6.3e-18 94.4 114 46.5
PGSC0003DMG400040544 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.8e-17 92.8 69 66.7
PGSC0003DMG400015099 Solanum tuberosum HOM05D000995 ORTHO05D007165 6.9e-17 90.9 114 45.6
PGSC0003DMG400034797 Solanum tuberosum HOM05D000995 ORTHO05D010478 1.5e-16 89.7 114 44.7
Nitab4.5_0000048g0120 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.4e-16 88.6 95 49.5
Sopen07g020760 Solanum pennellii HOM05D000002 ORTHO05D000001 4.5e-16 88.2 66 65.2
Sopen06g006570 Solanum pennellii HOM05D000995 ORTHO05D002620 1.0e-15 87.0 107 48.6
Nitab4.5_0000263g0210 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.3e-15 86.7 82 53.7
Nitab4.5_0000419g0120 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.3e-15 86.7 82 53.7
Nitab4.5_0011017g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.9e-15 85.5 73 57.5
Nitab4.5_0000095g0090 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.9e-14 82.8 94 46.8
Nitab4.5_0004188g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.1e-13 79.3 83 49.4
Nitab4.5_0005517g0050 Nicotiana tabacum HOM05D003617 ORTHO05D010478 6.1e-13 77.8 68 55.9
CAN.G370.37 Capsicum annuum HOM05D003617 ORTHO05D010478 1.8e-12 76.3 104 43.3
Nitab4.5_0004591g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.9e-12 75.1 80 52.5
PGSC0003DMG400007485 Solanum tuberosum HOM05D000995 ORTHO05D001773 5.1e-12 74.7 83 49.4
Peaxi162Scf00883g00081 Petunia axillaris HOM05D003617 ORTHO05D007165 6.7e-12 74.3 105 41.0
CAN.G34.10 Capsicum annuum HOM05D003617 ORTHO05D010478 8.8e-12 73.9 111 40.5
Nitab4.5_0000481g0030 Nicotiana tabacum HOM05D003617 ORTHO05D010478 8.8e-12 73.9 94 44.7
Nitab4.5_0000004g0300 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.4e-11 70.9 96 42.7
Peaxi162Scf00991g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 9.7e-11 70.5 77 46.8
Nitab4.5_0000078g0230 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.8e-10 68.9 74 50.0
CAN.G68.7 Capsicum annuum HOM05D003617 ORTHO05D010478 4.8e-10 68.2 94 41.5
PGSC0003DMG400045522 Solanum tuberosum HOM05D003617 ORTHO05D010478 4.8e-10 68.2 98 40.8
CAN.G108.56 Capsicum annuum HOM05D003617 ORTHO05D010478 8.2e-10 67.4 97 40.2
Nitab4.5_0002397g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.1e-09 67.0 68 50.0
Nitab4.5_0003674g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.1e-09 67.0 93 38.7
Peaxi162Scf00104g00615 Petunia axillaris HOM05D003617 ORTHO05D007165 1.1e-09 67.0 84 45.2
Peaxi162Scf00148g00142 Petunia axillaris HOM05D003617 ORTHO05D007165 1.8e-09 66.2 77 45.5
PGSC0003DMG400035791 Solanum tuberosum HOM05D000995 ORTHO05D000638 3.1e-09 65.5 52 63.5
Nitab4.5_0000045g0140 Nicotiana tabacum HOM05D003617 ORTHO05D010478 5.3e-09 64.7 82 45.1
CAN.G1362.2 Capsicum annuum HOM05D003617 ORTHO05D010478 6.9e-09 64.3 89 41.6
Peaxi162Scf00658g00027 Petunia axillaris HOM05D003617 ORTHO05D007165 9.1e-09 63.9 105 40.0
CAN.G41.3 Capsicum annuum HOM05D003617 ORTHO05D010478 2.0e-08 62.8 66 50.0
Nitab4.5_0001939g0070 Nicotiana tabacum HOM05D003617 ORTHO05D010478 4.5e-08 61.6 68 47.1
Peaxi162Scf00963g00001 Petunia axillaris HOM05D003617 ORTHO05D007165 5.9e-08 61.2 68 47.1
CAN.G474.5 Capsicum annuum HOM05D001802 ORTHO05D010478 6.5e-07 57.8 53 54.7
Nitab4.5_0002289g0150 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.2e-06 55.5 53 52.8
PGSC0003DMG400039936 Solanum tuberosum HOM05D003617 ORTHO05D007165 5.5e-06 54.7 48 56.2
Nitab4.5_0018035g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.4e-06 53.9 45 57.8


User provided reference genes

Program Settings