Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G908.4 Capsicum annuum HOM05D003910 ORTHO05D004622 4.1e-251 870.9 437 100.0
Solyc08g069030.4 Solanum lycopersicum HOM05D003910 ORTHO05D004622 6.3e-236 820.5 429 95.3
PGSC0003DMG400029545 Solanum tuberosum HOM05D003910 ORTHO05D004622 1.0e-233 813.1 429 94.4
Sopen08g022680 Solanum pennellii HOM05D003910 ORTHO05D004622 9.7e-229 796.6 429 93.0
Nitab4.5_0005516g0010 Nicotiana tabacum HOM05D003910 ORTHO05D004622 1.3e-220 769.6 429 90.2
Nitab4.5_0000502g0120 Nicotiana tabacum HOM05D003910 ORTHO05D004622 3.8e-217 758.1 429 89.5
Peaxi162Scf00288g00822 Petunia axillaris HOM05D003910 ORTHO05D004622 7.8e-202 707.2 429 85.3
Haze_17499 Corylus avellana HOM05D003910 ORTHO05D004622 1.1e-200 703.4 434 82.0
Cfa018581 Carpinus fangiana HOM05D003910 ORTHO05D004622 4.7e-199 698.0 434 81.6
CSS0022256 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 1.2e-197 693.3 451 78.5
Sabra05G0135000 Salix brachista HOM05D003910 ORTHO05D004622 2.6e-197 692.2 434 81.6
Dinv07208 Davidia involucrata HOM05D003910 ORTHO05D004622 4.4e-197 691.4 438 80.6
CiPaw.16G066200 Carya illinoinensis HOM05D003910 ORTHO05D004622 7.5e-197 690.6 436 80.5
Dinv27301 Davidia involucrata HOM05D003910 ORTHO05D004622 1.3e-196 689.9 388 88.7
Aa31LG11G8660 Aethionema arabicum HOM05D003910 ORTHO05D004622 2.9e-196 688.7 430 81.2
AT1G69740 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 4.9e-196 688.0 435 80.7
AL2G28910 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 6.4e-196 687.6 435 81.1
MSTRG.25378 Avicennia marina HOM05D003910 ORTHO05D004622 6.4e-196 687.6 435 80.9
Nn4g23592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 1.4e-195 686.4 396 86.4
Rhsim05G0148200 Rhododendron simsii HOM05D003910 ORTHO05D004622 3.2e-195 685.3 431 80.7
SGA_v2.0_scaffold52G18960 Striga asiatica HOM05D003910 ORTHO05D004622 7.0e-195 684.1 417 83.5
HanXRQChr17g0559761 Helianthus annuus HOM05D003910 ORTHO05D004622 2.0e-194 682.6 433 80.1
THA.LOC104813147 Tarenaya hassleriana HOM05D003910 ORTHO05D004622 4.6e-194 681.4 433 80.6
Cpa.g.sc64.96 Carica papaya HOM05D003910 ORTHO05D004622 1.9e-192 676.0 436 79.1
PGR044G2730 Punica granatum HOM05D003910 ORTHO05D004622 3.3e-192 675.2 435 78.9
Sp5g24850 Schrenkiella parvula HOM05D003910 ORTHO05D004622 1.6e-191 672.9 433 79.4
CARHR062800 Cardamine hirsuta HOM05D003910 ORTHO05D004622 3.6e-191 671.8 435 79.8
Lj7A342T56 Lonicera japonica HOM05D003910 ORTHO05D004622 1.1e-190 670.2 370 89.7
CANSAT25G1111 Cannabis sativa HOM05D003910 ORTHO05D004622 3.1e-190 668.7 435 78.4
ECA233G1142 Erigeron canadensis HOM05D003910 ORTHO05D004622 3.1e-190 668.7 429 79.7
Lsat_1_v5_gn_8_141520 Lactuca sativa HOM05D003910 ORTHO05D004622 5.2e-190 667.9 429 79.3
MD08G1161600 Malus domestica HOM05D003910 ORTHO05D004622 8.9e-190 667.2 390 86.7
Carub.0002s1641 Capsella rubella HOM05D003910 ORTHO05D004622 3.4e-189 665.2 435 79.1
COL.COLO4_24698 Corchorus olitorius HOM05D003910 ORTHO05D004622 3.4e-189 665.2 435 78.9
C06p43500 Brassica napus HOM05D003910 ORTHO05D004622 5.8e-189 664.5 433 78.8
BolC6t39425H Brassica oleracea HOM05D003910 ORTHO05D004622 5.8e-189 664.5 433 78.8
Thhalv10018595m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 5.8e-189 664.5 390 86.2
Oeu028562.1 Olea europaea HOM05D003910 ORTHO05D004622 5.8e-189 664.5 426 79.6
SalBow7G1186 Salvia bowleyana HOM05D003910 ORTHO05D004622 5.8e-189 664.5 459 76.5
BcaB03g14749 Brassica carinata HOM05D003910 ORTHO05D004622 1.7e-188 662.9 432 78.7
PSO339G3693 Papaver somniferum HOM05D003910 ORTHO05D004622 1.7e-188 662.9 434 78.3
Prupe.1G494300 Prunus persica HOM05D003910 ORTHO05D004622 1.7e-188 662.9 429 79.0
BcaC08g46419 Brassica carinata HOM05D003910 ORTHO05D004622 2.2e-188 662.5 433 78.5
Cc08_g06800 Coffea canephora HOM05D003910 ORTHO05D004622 2.2e-188 662.5 431 78.2
PSO384G4520 Papaver somniferum HOM05D003910 ORTHO05D004622 3.7e-188 661.8 434 78.3
Thecc.08G127500 Theobroma cacao HOM05D003910 ORTHO05D004622 3.7e-188 661.8 436 78.4
Migut.C01121 Erythranthe guttata HOM05D003910 ORTHO05D004622 3.2e-187 658.7 435 79.3
Gohir.D05G237801 Gossypium hirsutum HOM05D003910 ORTHO05D004622 5.4e-187 657.9 440 78.2
Gorai.009G246200 Gossypium raimondii HOM05D003910 ORTHO05D004622 5.4e-187 657.9 440 78.2
MD15G1346700 Malus domestica HOM05D003910 ORTHO05D004622 1.2e-186 656.8 390 84.6
A07p36130 Brassica napus HOM05D003910 ORTHO05D004622 7.8e-186 654.1 437 78.0
Potri.002G082300 Populus trichocarpa HOM05D003910 ORTHO05D004622 1.0e-185 653.7 434 78.1
Gohir.A05G235500 Gossypium hirsutum HOM05D003910 ORTHO05D004622 2.3e-185 652.5 440 77.5
TAR629G0788 Trochodendron aralioides HOM05D003910 ORTHO05D004622 1.5e-184 649.8 436 76.8
Ah.15g093760 Amaranthus hybridus HOM05D003910 ORTHO05D004622 1.9e-184 649.4 461 73.1
CDE10G0179 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 5.6e-184 647.9 369 85.4
AUR62014326 Chenopodium quinoa HOM05D003910 ORTHO05D004622 2.1e-183 646.0 438 76.7
Medtr3g088610 Medicago truncatula HOM05D003910 ORTHO05D004622 2.1e-183 646.0 363 87.3
GSVIVG01008851001 Vitis vinifera HOM05D003910 ORTHO05D004622 2.1e-183 646.0 434 76.5
MELO3C008086.2 Cucumis melo HOM05D003910 ORTHO05D004622 2.8e-183 645.6 436 77.1
Sabra02G0064500 Salix brachista HOM05D003910 ORTHO05D004622 2.8e-183 645.6 441 76.4
CsaV3_2G033150 Cucumis sativus L. HOM05D003910 ORTHO05D004622 3.6e-183 645.2 436 76.6
AUR62019066 Chenopodium quinoa HOM05D003910 ORTHO05D004622 6.2e-183 644.4 440 76.1
Duzib041G0414 Durio zibethinus HOM05D003910 ORTHO05D004622 6.2e-183 644.4 436 77.3
Manes.02G164600 Manihot esculenta HOM05D003910 ORTHO05D004622 8.1e-183 644.0 398 82.7
BraA07t31189Z Brassica rapa HOM05D003910 ORTHO05D004622 1.4e-182 643.3 434 76.5
Ciclev10001195m.g Citrus clementina HOM05D003910 ORTHO05D004622 1.4e-182 643.3 442 75.3
DCAR_016682 Daucus carota HOM05D003910 ORTHO05D004622 1.8e-182 642.9 382 83.8
QL09p034136 Quercus lobata HOM05D003910 ORTHO05D004622 5.2e-182 641.3 410 79.0
EL10Ac1g01030 Beta vulgaris HOM05D003910 ORTHO05D004622 3.4e-181 638.6 456 73.9
Manes.18G078475 Manihot esculenta HOM05D003910 ORTHO05D004622 7.5e-181 637.5 435 77.5
ClCG11G008960 Citrullus lanatus HOM05D003910 ORTHO05D004622 2.2e-180 636.0 436 76.4
Eucgr.F03796 Eucalyptus grandis HOM05D003910 ORTHO05D004622 3.7e-180 635.2 403 80.9
Sed0003239 Sechium edule HOM05D003910 ORTHO05D004622 6.4e-180 634.4 403 80.1
Atru.chr13.1495 Acer truncatum HOM05D003910 ORTHO05D004622 8.3e-180 634.0 457 73.1
unitig_46.g18101 Utricularia gibba HOM05D003910 ORTHO05D004622 2.4e-179 632.5 342 90.4
TWI32G0928 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 4.1e-179 631.7 446 74.2
TWI60G1334 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 7.1e-179 630.9 376 84.3
Lalb_Chr11g0066041 Lupinus albus HOM05D003910 ORTHO05D004622 4.6e-178 628.2 389 81.0
Lalb_Chr08g0241321 Lupinus albus HOM05D003910 ORTHO05D004622 6.0e-178 627.9 399 80.7
Lj1g0017187 Lotus japonicus HOM05D003910 ORTHO05D004622 5.1e-177 624.8 432 75.0
Hma1.2p1_0129F.1_g060300 Hydrangea macrophylla HOM05D003910 ORTHO05D004622 1.9e-176 622.9 400 79.8
Phvul.009G127100 Phaseolus vulgaris HOM05D003910 ORTHO05D004622 1.9e-176 622.9 363 84.6
Duzib116G0657 Durio zibethinus HOM05D003910 ORTHO05D004622 4.3e-176 621.7 434 75.6
VMungo1309G0189 Vigna mungo HOM05D003910 ORTHO05D004622 4.3e-176 621.7 407 78.4
Glyma.04G247700 Glycine max HOM05D003910 ORTHO05D004622 1.2e-175 620.2 363 84.8
Ca_16573_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 1.1e-174 617.1 363 84.3
Ca_29570_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 1.1e-174 617.1 363 84.3
Os06g0704600 Oryza sativa ssp. japonica HOM05D003910 ORTHO05D004622 2.4e-174 615.9 387 80.9
FAN15G2864 Fragaria x ananassa HOM05D003910 ORTHO05D004622 2.6e-173 612.5 389 79.4
Psat5g087720 Pisum sativum HOM05D003910 ORTHO05D004622 3.4e-173 612.1 327 90.5
TPR.G16047 Trifolium pratense HOM05D003910 ORTHO05D004622 1.3e-172 610.1 363 83.5
Zm00001eb227310 Zea mays HOM05D003910 ORTHO05D004622 2.9e-172 609.0 387 79.3
FAN20G2211 Fragaria x ananassa HOM05D003910 ORTHO05D004622 1.6e-170 603.2 389 78.9
AagrBONN_evm.TU.Sc2ySwM_117.3949 Anthoceros agrestis HOM05D003910 ORTHO05D004622 2.1e-170 602.8 372 80.1
RcHm_v2.0_Chr6g0296081 Rosa chinensis HOM05D003910 ORTHO05D004622 2.1e-170 602.8 389 79.2
FAN27G3176 Fragaria x ananassa HOM05D003910 ORTHO05D004622 7.8e-170 600.9 389 78.4
FvH4_2g27170 Fragaria vesca HOM05D003910 ORTHO05D004622 1.3e-169 600.1 373 80.7
FAN24G0257 Fragaria x ananassa HOM05D003910 ORTHO05D004622 1.3e-169 600.1 373 80.7
SMO147G0120 Selaginella moellendorffii HOM05D003910 ORTHO05D004622 5.1e-169 598.2 361 79.2
HPP92_019462 Vanilla planifolia HOM05D003910 ORTHO05D004622 5.1e-169 598.2 388 78.1
ATR0691G248 Amborella trichopoda HOM05D003910 ORTHO05D004622 1.9e-168 596.3 373 77.2
Aqoxy3G03785 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 9.6e-168 594.0 437 70.9
Pp3c4_13690 Physcomitrium patens HOM05D003910 ORTHO05D004622 3.4e-165 585.5 363 78.0
SHI34070 Sapria himalayana HOM05D003910 ORTHO05D004622 3.4e-165 585.5 395 74.2
Pp3c12_10600 Physcomitrium patens HOM05D003910 ORTHO05D004622 2.2e-164 582.8 376 75.5
Mapoly0065s0095 Marchantia polymorpha HOM05D003910 ORTHO05D004622 4.9e-164 581.6 363 78.0
arahy.Tifrunner.gnm1.ann1.LMC2LS Arachis hypogaea HOM05D003910 ORTHO05D004622 1.9e-163 579.7 385 77.4
Oeu059440.1 Olea europaea HOM05D003910 ORTHO05D004622 2.4e-163 579.3 388 77.1
arahy.Tifrunner.gnm1.ann1.YMC104 Arachis hypogaea HOM05D003910 ORTHO05D004622 3.2e-163 578.9 385 77.4
Aqoxy6G02874 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 6.0e-162 574.7 406 72.2
MBI14_g21210_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 8.1e-159 564.3 313 86.3
MBI14_g37526_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 3.3e-152 542.3 396 70.5
CDE10G1335 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 6.9e-150 534.6 307 83.7
Actinidia29473 Actinidia chinensis HOM05D003910 ORTHO05D004622 4.9e-148 528.5 369 76.2
SEGI_23261 Sequoiadendron giganteum HOM05D003910 ORTHO05D004622 4.9e-148 528.5 383 70.0
PSO063G2338 Papaver somniferum HOM05D003910 ORTHO05D004622 3.9e-145 518.8 281 90.0
CARHR035900 Cardamine hirsuta HOM05D003910 ORTHO05D004622 3.4e-141 505.8 350 72.9
Thhalv10012213m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 2.1e-138 496.5 349 71.9
AL1G52270 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 5.1e-137 491.9 425 62.8
AT1G44318 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 6.7e-137 491.5 426 62.0
Carub.0001s3515 Capsella rubella HOM05D003910 ORTHO05D004622 3.3e-136 489.2 350 71.1
Sc16g0000040 Simmondsia chinensis HOM05D003910 ORTHO05D004622 1.3e-135 487.3 357 70.9
BcaB07g33952 Brassica carinata HOM05D003910 ORTHO05D004622 1.5e-133 480.3 343 71.1
BcaC08g42844 Brassica carinata HOM05D003910 ORTHO05D004622 7.7e-133 478.0 427 61.4
C06p00600 Brassica napus HOM05D003910 ORTHO05D004622 7.7e-133 478.0 427 61.4
BolC6t35193H Brassica oleracea HOM05D003910 ORTHO05D004622 1.0e-132 477.6 427 61.4
Glyma.06G115000 Glycine max HOM05D003910 ORTHO05D004622 1.0e-132 477.6 268 86.9
Sp1g33510 Schrenkiella parvula HOM05D003910 ORTHO05D004622 1.3e-132 477.2 327 72.5
BraSC36t46049Z Brassica rapa HOM05D003910 ORTHO05D004622 1.6e-130 470.3 343 70.6
A10p07550 Brassica napus HOM05D003910 ORTHO05D004622 1.0e-129 467.6 343 70.0
TPR.G35178 Trifolium pratense HOM05D003910 ORTHO05D004622 1.9e-123 446.8 394 61.2
MCO01G126 Micromonas commoda HOM05D003910 ORTHO05D004622 2.7e-122 443.0 370 60.5
Cre02.g091050 Chlamydomonas reinhardtii HOM05D003910 ORTHO05D004622 5.1e-121 438.7 350 60.6
CSS0027293 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 5.7e-120 435.3 358 67.3
PSO782G2793 Papaver somniferum HOM05D003910 ORTHO05D004622 9.7e-120 434.5 329 68.7
PRCOL_00003407 Prasinoderma coloniale HOM05D003910 ORTHO05D004622 1.0e-116 424.5 312 67.3
SGA_v2.0_scaffold24G10456 Striga asiatica HOM05D003910 ORTHO05D004622 4.2e-115 419.1 327 69.1
Aa31LG6G9390 Aethionema arabicum HOM05D003910 ORTHO05D004622 6.1e-114 415.2 280 73.6
Atru.chr12.1381 Acer truncatum HOM05D003910 ORTHO05D004622 9.4e-107 391.3 224 87.1
Psat4g053280 Pisum sativum HOM05D003910 ORTHO05D004622 1.7e-87 327.4 228 71.5
Aa31sc95G130 Aethionema arabicum HOM05D003910 ORTHO05D004622 1.3e-76 291.2 234 66.7
Actinidia03462 Actinidia chinensis HOM05D003910 ORTHO05D004622 6.4e-71 272.3 193 70.5
CBR_g49534 Chara braunii HOM05D003910 ORTHO05D000048 6.6e-68 262.3 201 64.7
Nn3g17592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 2.0e-64 250.8 233 58.8
arahy.Tifrunner.gnm1.ann1.875P1G Arachis hypogaea HOM05D003910 ORTHO05D004622 2.2e-63 247.3 182 67.6
Haze_27031 Corylus avellana HOM05D003910 ORTHO05D004622 3.5e-61 240.0 276 48.6
arahy.Tifrunner.gnm1.ann1.YZW1CW Arachis hypogaea HOM05D003910 ORTHO05D004622 1.7e-60 237.7 182 65.4
Psat0s476g0040 Pisum sativum HOM05D003910 ORTHO05D004622 2.9e-55 220.3 149 69.1
arahy.Tifrunner.gnm1.ann1.I497ZX Arachis hypogaea HOM05D003910 ORTHO05D004622 9.3e-54 215.3 178 61.2
arahy.Tifrunner.gnm1.ann1.MAXD3F Arachis hypogaea HOM05D003910 ORTHO05D004622 4.3e-51 206.5 172 61.6
Cfa022049 Carpinus fangiana HOM05D003910 ORTHO05D004622 2.4e-49 200.7 308 38.6
Aa31sc107G70 Aethionema arabicum HOM05D003910 ORTHO05D004622 3.8e-47 193.4 148 70.3
arahy.Tifrunner.gnm1.ann1.KLV74S Arachis hypogaea HOM05D003910 ORTHO05D004622 9.3e-46 188.7 178 57.3
BcaB06g27098 Brassica carinata HOM05D003910 ORTHO05D004622 1.3e-44 184.9 101 85.1
arahy.Tifrunner.gnm1.ann1.FDSF2K Arachis hypogaea HOM05D003910 ORTHO05D004622 8.7e-44 182.2 171 58.5
Nn4g23594 Nelumbo nucifera HOM05D003910 ORTHO05D004622 1.1e-43 181.8 100 89.0
BcaB05g22163 Brassica carinata HOM05D003910 ORTHO05D004622 1.3e-42 178.3 101 82.2
Psat4g053240 Pisum sativum HOM05D003910 ORTHO05D004622 1.3e-42 178.3 104 83.7
BcaB04g19319 Brassica carinata HOM05D003910 ORTHO05D004622 1.1e-38 165.2 100 79.0
Oeu059446.1 Olea europaea HOM05D003910 ORTHO05D004622 1.3e-36 158.3 77 92.2
Haze_27000 Corylus avellana HOM05D003910 ORTHO05D004622 3.3e-35 153.7 212 39.6
TPR.G20499 Trifolium pratense HOM05D003910 ORTHO05D004622 3.3e-35 153.7 122 67.2
TAR622G0657 Trochodendron aralioides HOM05D003910 ORTHO05D004622 3.3e-35 153.7 135 63.7
SpUn0247_0040 Schrenkiella parvula HOM05D003910 ORTHO05D004622 5.3e-33 146.4 76 88.2
Actinidia03463 Actinidia chinensis HOM05D003910 ORTHO05D004622 9.6e-27 125.6 72 87.5
arahy.Tifrunner.gnm1.ann1.ZWJ939 Arachis hypogaea HOM05D000074 ORTHO05D004622 1.0e-23 115.5 181 42.0
TAR371G0308 Trochodendron aralioides HOM05D003910 ORTHO05D004622 1.7e-23 114.8 74 77.0
Lsat_1_v5_gn_8_139480 Lactuca sativa HOM05D003910 ORTHO05D004420 1.3e-20 105.1 106 55.7
Aa31sc107G60 Aethionema arabicum HOM05D003910 ORTHO05D059684 3.6e-13 80.5 49 79.6
Psat1g078960 Pisum sativum HOM05D003910 ORTHO05D004622 4.6e-13 80.1 77 54.5
Psat1g079000 Pisum sativum HOM05D003910 ORTHO05D004622 4.6e-13 80.1 77 54.5
SEGI_40510 Sequoiadendron giganteum HOM05D003910 ORTHO05D004622 2.0e-11 74.7 50 68.0
Sp6g37550 Schrenkiella parvula HOM05D003910 ORTHO05D004622 1.3e-10 72.0 68 57.4
arahy.Tifrunner.gnm1.ann1.LHV34C Arachis hypogaea HOM05D003910 ORTHO05D004622 4.1e-09 67.0 64 57.8
Nn3g17591 Nelumbo nucifera HOM05D003910 ORTHO05D004622 4.1e-09 67.0 36 88.9
Lsat_1_v5_gn_8_143861 Lactuca sativa HOM05D003910 ORTHO05D004622 5.3e-09 66.6 59 61.0
ECA233G3734 Erigeron canadensis HOM05D005443 ORTHO05D009021 8.5e-07 59.3 106 41.5


User provided reference genes

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