Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G908.1 Capsicum annuum HOM05D004033 ORTHO05D002701 1.7e-229 798.9 390 100.0
CAN.G739.5 Capsicum annuum HOM05D004033 ORTHO05D002701 2.1e-105 386.7 366 56.3
CAN.G160.46 Capsicum annuum HOM05D004033 ORTHO05D002701 2.5e-87 326.6 185 80.0
Nitab4.5_0003657g0010 Nicotiana tabacum HOM05D000045 ORTHO05D002701 9.2e-45 185.3 223 41.7
CAN.G1662.1 Capsicum annuum HOM05D004033 ORTHO05D002701 2.1e-41 174.1 238 45.8
Nitab4.5_0008760g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.0e-40 169.9 250 39.2
Nitab4.5_0001727g0180 Nicotiana tabacum HOM05D004033 ORTHO05D002701 5.0e-35 152.9 217 36.4
Nitab4.5_0001246g0060 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.8e-32 144.4 167 42.5
Nitab4.5_0012491g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.0e-32 143.3 192 40.1
CAN.G92.5 Capsicum annuum HOM05D004033 ORTHO05D002701 3.4e-31 140.2 78 82.1
Nitab4.5_0006220g0020 Nicotiana tabacum HOM05D000045 ORTHO05D002701 2.2e-30 137.5 221 36.2
Nitab4.5_0002352g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.9e-30 136.3 162 40.7
Nitab4.5_0000691g0160 Nicotiana tabacum HOM05D000045 ORTHO05D002701 1.1e-29 135.2 183 38.3
CAN.G249.10 Capsicum annuum HOM05D004033 ORTHO05D002701 4.1e-29 133.3 101 67.3
CAN.G98.5 Capsicum annuum HOM05D000045 ORTHO05D002701 7.0e-29 132.5 87 75.9
CAN.G168.15 Capsicum annuum HOM05D004033 ORTHO05D002701 6.0e-28 129.4 180 41.1
Nitab4.5_0000260g0060 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.7e-27 127.9 203 37.4
Nitab4.5_0000082g0390 Nicotiana tabacum HOM05D000045 ORTHO05D002701 6.6e-27 125.9 203 31.0
Nitab4.5_0002714g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.9e-26 124.4 201 36.8
Nitab4.5_0002782g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 5.6e-26 122.9 187 32.1
Peaxi162Scf01373g00003 Petunia axillaris HOM05D000045 ORTHO05D002701 1.6e-25 121.3 177 34.5
Nitab4.5_0002211g0170 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.6e-25 120.2 173 37.6
Peaxi162Scf03947g00009 Petunia axillaris HOM05D000045 ORTHO05D002701 3.6e-25 120.2 177 34.5
Nitab4.5_0000843g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 8.1e-25 119.0 234 28.2
Nitab4.5_0003881g0030 Nicotiana tabacum HOM05D000045 ORTHO05D002701 1.1e-24 118.6 167 36.5
Nitab4.5_0001969g0100 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.4e-24 118.2 162 38.3
Peaxi162Scf01954g00002 Petunia axillaris HOM05D000045 ORTHO05D002701 1.4e-24 118.2 177 33.9
CAN.G320.1 Capsicum annuum HOM05D004033 ORTHO05D002701 5.2e-24 116.3 184 36.4
Migut.M00234 Erythranthe guttata HOM05D000045 ORTHO05D000067 6.8e-24 115.9 185 31.9
Nitab4.5_0002309g0050 Nicotiana tabacum HOM05D000045 ORTHO05D002701 1.5e-23 114.8 220 31.4
Nitab4.5_0002906g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.6e-23 114.0 166 38.0
Nitab4.5_0002302g0100 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.9e-22 110.5 127 42.5
Nitab4.5_0004578g0040 Nicotiana tabacum HOM05D000045 ORTHO05D002701 2.9e-22 110.5 251 31.1
Nitab4.5_0000707g0210 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.2e-21 107.1 129 36.4
Peaxi162Scf00151g00410 Petunia axillaris HOM05D000045 ORTHO05D002701 1.2e-20 105.1 163 34.4
Nitab4.5_0001021g0150 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.6e-20 104.8 219 32.9
Migut.A01062 Erythranthe guttata HOM05D000045 ORTHO05D000067 4.6e-20 103.2 179 33.0
Nitab4.5_0000092g0150 Nicotiana tabacum HOM05D004033 ORTHO05D002701 7.8e-20 102.4 150 36.7
Nitab4.5_0004219g0020 Nicotiana tabacum HOM05D000045 ORTHO05D002701 7.8e-20 102.4 201 33.8
CAN.G1094.23 Capsicum annuum HOM05D002080 ORTHO05D002062 3.9e-19 100.1 162 36.4
Nitab4.5_0000095g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 5.1e-19 99.8 134 35.8
Nitab4.5_0008386g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 6.6e-19 99.4 153 34.0
CAN.G2002.1 Capsicum annuum HOM05D004033 ORTHO05D002701 1.2e-17 95.1 243 30.5
Nitab4.5_0001488g0170 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.8e-17 94.0 220 25.9
Nitab4.5_0001781g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.6e-17 93.6 134 35.1
Nitab4.5_0005746g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 8.1e-17 92.4 202 26.2
Nitab4.5_0000043g0140 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.1e-16 90.5 106 43.4
Nitab4.5_0011951g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.0e-16 90.1 116 37.1
Nitab4.5_0000540g0130 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.4e-15 87.0 143 32.9
Nitab4.5_0002449g0080 Nicotiana tabacum HOM05D004033 ORTHO05D002701 5.8e-15 86.3 222 31.5
Nitab4.5_0003611g0120 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.3e-14 85.1 117 35.9
PSO135G0126 Papaver somniferum HOM05D000045 ORTHO05D000067 1.3e-14 85.1 194 30.4
Manes.09G081652 Manihot esculenta HOM05D000045 ORTHO05D000067 1.7e-14 84.7 266 25.9
Nitab4.5_0001031g0050 Nicotiana tabacum HOM05D000045 ORTHO05D002701 2.2e-14 84.3 118 33.1
PSO349G0194 Papaver somniferum HOM05D000045 ORTHO05D000067 2.9e-14 84.0 194 29.4
PSO017G1702 Papaver somniferum HOM05D000045 ORTHO05D000067 1.4e-13 81.6 192 31.8
PSO063G5377 Papaver somniferum HOM05D000045 ORTHO05D000067 1.9e-13 81.3 192 31.2
Nitab4.5_0003463g0100 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.1e-13 80.1 101 34.7
PSO765G0007 Papaver somniferum HOM05D000045 ORTHO05D000067 4.1e-13 80.1 194 28.4
CAN.G490.39 Capsicum annuum HOM05D000045 ORTHO05D002701 7.1e-13 79.3 45 82.2
Nitab4.5_0001168g0180 Nicotiana tabacum HOM05D000045 ORTHO05D002701 9.2e-13 79.0 162 29.6
Peaxi162Scf00109g01110 Petunia axillaris HOM05D000045 ORTHO05D002701 9.2e-13 79.0 160 28.8
TWI34G1375 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 1.6e-12 78.2 197 26.9
PGSC0003DMG400045670 Solanum tuberosum HOM05D004033 ORTHO05D002701 2.1e-12 77.8 72 54.2
Nitab4.5_0009727g0010 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.7e-12 77.4 200 28.5
TWI74G0350 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 3.5e-12 77.0 197 26.9
Nitab4.5_0000987g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.3e-11 74.3 159 29.6
Nitab4.5_0004465g0090 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.3e-11 74.3 123 29.3
PSO017G6773 Papaver somniferum HOM05D000045 ORTHO05D009940 2.3e-11 74.3 206 25.7
Nitab4.5_0001861g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.9e-11 73.6 114 28.9
PSO063G1228 Papaver somniferum HOM05D000045 ORTHO05D000067 3.9e-11 73.6 165 26.7
PSO675G3853 Papaver somniferum HOM05D000045 ORTHO05D000067 3.9e-11 73.6 158 27.2
Nitab4.5_0001432g0080 Nicotiana tabacum HOM05D004033 ORTHO05D002701 5.1e-11 73.2 120 32.5
CAN.G481.54 Capsicum annuum HOM05D004033 ORTHO05D002701 8.6e-11 72.4 47 72.3
PSO541G3849 Papaver somniferum HOM05D000045 ORTHO05D000067 1.5e-10 71.6 165 26.1
TWI59G0983 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.9e-10 71.2 214 25.2
TWI60G1422 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.9e-10 71.2 276 22.1
CSS0005556 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.5e-10 70.9 199 26.6
Nitab4.5_0004443g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.5e-10 70.9 172 23.8
Solyc10g062080.1 Solanum lycopersicum HOM05D000045 ORTHO05D002701 2.5e-10 70.9 72 44.4
CSS0038307 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.3e-10 70.1 199 26.1
Nitab4.5_0002386g0080 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.3e-10 70.1 160 25.6
Aqoxy6G02399 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 5.6e-10 69.7 161 28.6
Nitab4.5_0004232g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.2e-09 68.6 63 50.8
CSS0014163 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.6e-09 68.2 240 22.9
TWI31G0500 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.6e-09 68.2 238 23.1
TWI81G0958 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.6e-09 68.2 238 23.1
Nitab4.5_0000307g0220 Nicotiana tabacum HOM05D004033 ORTHO05D002701 8.1e-09 65.9 141 31.2
Atru.chr12.1768 Acer truncatum HOM05D000045 ORTHO05D009940 1.4e-08 65.1 194 26.3
TWI59G1432 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.4e-08 65.1 193 27.5
Aa31LG10G2480 Aethionema arabicum HOM05D000045 ORTHO05D000067 1.8e-08 64.7 211 27.5
PSO478G2006 Papaver somniferum HOM05D000045 ORTHO05D009940 1.8e-08 64.7 127 32.3
Prupe.4G256500 Prunus persica HOM05D000045 ORTHO05D000067 1.8e-08 64.7 167 25.7
Solyc04g047790.1 Solanum lycopersicum HOM05D000045 ORTHO05D002701 1.8e-08 64.7 88 40.9
CSS0031250 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.4e-08 64.3 240 22.5
Atru.chr1.1265 Acer truncatum HOM05D000045 ORTHO05D009940 3.1e-08 63.9 167 28.7
CANSAT64G1231 Cannabis sativa HOM05D000045 ORTHO05D000067 3.1e-08 63.9 163 29.4
PSO478G0574 Papaver somniferum HOM05D000045 ORTHO05D000067 3.1e-08 63.9 324 21.0
CANSAT78G0103 Cannabis sativa HOM05D000045 ORTHO05D000067 5.2e-08 63.2 244 25.4
Nitab4.5_0005287g0010 Nicotiana tabacum HOM05D004033 ORTHO05D002701 5.2e-08 63.2 51 52.9
PSO591G0277 Papaver somniferum HOM05D000045 ORTHO05D009940 5.2e-08 63.2 241 24.5
PSO384G4836 Papaver somniferum HOM05D000045 ORTHO05D000067 6.9e-08 62.8 324 22.5
TWI09G0930 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 6.9e-08 62.8 185 25.4
CSS0010009 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.2e-07 62.0 160 25.6
CSS0018417 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.0e-07 61.2 160 25.0
CAN.G1700.1 Capsicum annuum HOM05D004033 ORTHO05D002701 2.0e-07 61.2 66 50.0
CSS0010592 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.6e-07 60.8 156 27.6
CSS0014852 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.6e-07 60.8 156 27.6
CSS0021605 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.6e-07 60.8 156 27.6
COL.COLO4_27566 Corchorus olitorius HOM05D000045 ORTHO05D000067 2.6e-07 60.8 250 23.2
Nitab4.5_0001310g0120 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.6e-07 60.8 79 34.2
Nitab4.5_0006574g0120 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.6e-07 60.8 153 24.8
Prupe.8G014900 Prunus persica HOM05D000045 ORTHO05D000067 2.6e-07 60.8 161 27.3
CSS0002504 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.4e-07 60.5 156 27.6
CSS0038133 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.4e-07 60.1 154 24.7
ClCG05G016770 Citrullus lanatus HOM05D000045 ORTHO05D000067 4.4e-07 60.1 156 28.2
CSS0049497 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 5.8e-07 59.7 212 23.1
CANSAT78G0134 Cannabis sativa HOM05D000045 ORTHO05D000067 5.8e-07 59.7 291 22.3
CSS0003188 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 7.6e-07 59.3 156 25.6
CSS0029137 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 7.6e-07 59.3 156 25.6
PSO210G5073 Papaver somniferum HOM05D000045 ORTHO05D009940 7.6e-07 59.3 249 20.5
VMungo0251G2295 Vigna mungo HOM05D000045 ORTHO05D000067 7.6e-07 59.3 156 27.6
FvH4_6g23211 Fragaria vesca HOM05D000045 ORTHO05D009940 9.9e-07 58.9 161 27.3
Solyc11g018640.1 Solanum lycopersicum HOM05D000045 ORTHO05D002701 9.9e-07 58.9 86 37.2
Aqoxy7G02166 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 1.3e-06 58.5 92 34.8
CSS0045445 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.3e-06 58.5 157 27.4
PSO675G4083 Papaver somniferum HOM05D000045 ORTHO05D000067 1.3e-06 58.5 210 23.8
CSS0012477 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.7e-06 58.2 156 28.2
Aqoxy3G01900 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 2.2e-06 57.8 153 25.5
CSS0013592 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.2e-06 57.8 159 23.9
CAN.G63.4 Capsicum annuum HOM05D004033 ORTHO05D002701 2.2e-06 57.8 45 60.0
Nitab4.5_0000025g0250 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.2e-06 57.8 89 29.2
Aqoxy2G01825 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 2.9e-06 57.4 188 25.5
CSS0022608 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.9e-06 57.4 158 27.2
PSO063G3008 Papaver somniferum HOM05D000045 ORTHO05D000067 2.9e-06 57.4 192 25.5
PSO675G7638 Papaver somniferum HOM05D000045 ORTHO05D009940 2.9e-06 57.4 296 24.0
TWI77G0218 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.9e-06 57.4 161 25.5
CSS0042980 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.8e-06 57.0 212 23.1
CiPaw.07G200600 Carya illinoinensis HOM05D000045 ORTHO05D000067 3.8e-06 57.0 164 25.6
Nitab4.5_0008768g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.8e-06 57.0 121 25.6
CiPaw.01G219800 Carya illinoinensis HOM05D000045 ORTHO05D000067 4.9e-06 56.6 192 25.5
COL.COLO4_24813 Corchorus olitorius HOM05D000045 ORTHO05D000067 4.9e-06 56.6 316 20.6
Nitab4.5_0011485g0010 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.9e-06 56.6 120 32.5
Sabra03G0076500 Salix brachista HOM05D000045 ORTHO05D000067 4.9e-06 56.6 287 20.2
MBI13_g31585_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 6.4e-06 56.2 122 27.9
Os11g0681300 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 6.4e-06 56.2 192 25.5
COL.COLO4_12305 Corchorus olitorius HOM05D000045 ORTHO05D000067 8.4e-06 55.8 303 21.5
PSO063G0267 Papaver somniferum HOM05D000045 ORTHO05D000067 8.4e-06 55.8 155 27.1


User provided reference genes

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