Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G906.1 Capsicum annuum HOM05D000002 ORTHO05D000001 9.1e-63 243.4 126 100.0
CSS0046072 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-17 92.8 183 38.3
Rhsim01G0080600 Rhododendron simsii HOM05D000002 ORTHO05D000001 5.8e-17 91.3 186 36.6
CSS0015841 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.8e-16 88.6 183 37.7
CSS0040555 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-15 86.3 157 42.7
CSS0047943 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.1e-15 84.3 140 42.1
Sopen01g009150 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-14 83.6 182 37.9
CSS0050078 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.1e-14 82.8 183 36.1
CSS0048686 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.7e-14 82.4 185 36.8
CSS0035415 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.5e-14 82.0 152 38.2
CSS0025880 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.3e-13 79.3 183 36.6
CSS0002225 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.9e-13 78.6 120 42.5
CSS0008175 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-12 77.0 140 39.3
CSS0027562 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-12 76.6 135 42.2
Hma1.2p1_1719F.1_g299230 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.5e-12 76.6 147 36.7
Nn2g10460 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.5e-12 76.6 136 40.4
Sopen01g013480 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-12 76.6 144 38.9
Sopen03g025100 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-12 76.6 144 39.6
Hma1.2p1_1768F.1_g301590 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.9e-12 76.3 147 36.7
Ciclev10023933m.g Citrus clementina HOM05D000002 ORTHO05D000001 3.3e-12 75.5 121 42.1
PSO832G2657 Papaver somniferum HOM05D000002 ORTHO05D000001 3.3e-12 75.5 162 36.4
CSS0036759 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-11 73.2 172 40.1
Nn4g25618 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.6e-11 73.2 144 38.9
RcHm_v2.0_Chr1g0329831 Rosa chinensis HOM05D000002 ORTHO05D000001 1.6e-11 73.2 161 40.4
Nn1g09172 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.1e-11 72.8 145 35.2
CSS0040082 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.8e-11 72.4 163 36.8
Nn1g04729 Nelumbo nucifera HOM05D000002 ORTHO05D000001 3.6e-11 72.0 69 58.0
SEGI_07554 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 3.6e-11 72.0 144 40.3
CSS0045643 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.8e-11 71.6 176 35.2
RcHm_v2.0_Chr4g0409151 Rosa chinensis HOM05D000002 ORTHO05D000001 6.2e-11 71.2 154 36.4
CSS0000424 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.1e-11 70.9 138 38.4
CSS0039281 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-10 70.5 173 34.7
CAN.G209.8 Capsicum annuum HOM05D000002 ORTHO05D000001 1.1e-10 70.5 127 39.4
Nn1g06669 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.1e-10 70.5 163 36.8
Hma1.2p1_1498F.1_g287120 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.4e-10 70.1 150 37.3
Nn6g34560 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.4e-10 70.1 170 37.1
Nn6g34561 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.4e-10 70.1 170 37.1
CSS0001757 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-10 69.7 147 36.7
Hma1.2p1_0774F.1_g216300 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.8e-10 69.7 146 36.3
QL09p034601 Quercus lobata HOM05D000002 ORTHO05D000001 1.8e-10 69.7 126 38.9
CSS0045479 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.4e-10 69.3 173 34.7
Nn7g37206 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.4e-10 69.3 144 41.0
Rhsim13G0212300 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.4e-10 69.3 167 34.7
Hma1.2p1_0176F.1_g077340 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.1e-10 68.9 130 38.5
Nn1g04728 Nelumbo nucifera HOM05D000002 ORTHO05D000001 3.1e-10 68.9 65 58.5
CSS0042948 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.0e-10 68.6 128 37.5
Nn4g26208 Nelumbo nucifera HOM05D000002 ORTHO05D000001 4.0e-10 68.6 62 61.3
QL11p047249 Quercus lobata HOM05D000002 ORTHO05D000001 4.0e-10 68.6 152 36.8
CSS0017625 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.3e-10 68.2 127 41.7
CSS0036210 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.3e-10 68.2 145 37.9
Sopen05g007860 Solanum pennellii HOM05D000002 ORTHO05D000001 5.3e-10 68.2 151 36.4
Sopen11g010290 Solanum pennellii HOM05D000002 ORTHO05D000001 5.3e-10 68.2 76 50.0
TWI56G1078 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 6.9e-10 67.8 129 36.4
CSS0016553 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-09 67.0 133 39.1
Hma1.2p1_0184F.1_g081330 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.2e-09 67.0 148 37.8
SHI05323 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-09 66.6 161 34.2
SHI52580 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-09 66.6 161 34.2
SHI53128 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-09 66.6 161 34.2
CSS0045806 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-09 66.2 184 35.3
CSS0049429 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-09 66.2 153 34.6
RcHm_v2.0_Chr7g0237911 Rosa chinensis HOM05D000002 ORTHO05D000001 2.0e-09 66.2 153 35.9
CSS0046044 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.6e-09 65.9 125 36.0
MD01G1101100 Malus domestica HOM05D000002 ORTHO05D000001 2.6e-09 65.9 145 34.5
ECA248G1474 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.4e-09 65.5 146 33.6
CSS0013769 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.5e-09 65.1 65 56.9
CSS0014778 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.8e-09 64.7 146 37.0
Sopen05g010950 Solanum pennellii HOM05D000002 ORTHO05D000001 5.8e-09 64.7 171 33.9
CSS0040360 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.6e-09 64.3 174 29.9
ECA246G0354 Erigeron canadensis HOM05D000230 ORTHO05D000176 7.6e-09 64.3 146 37.7
Hma1.2p1_0764F.1_g215020 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.6e-09 64.3 163 35.6
PSO541G3278 Papaver somniferum HOM05D000002 ORTHO05D000001 7.6e-09 64.3 134 33.6
Sopen01g017420 Solanum pennellii HOM05D000002 ORTHO05D000001 7.6e-09 64.3 171 33.9
Sopen05g018370 Solanum pennellii HOM05D000002 ORTHO05D000001 7.6e-09 64.3 171 33.9
Sopen06g017010 Solanum pennellii HOM05D000002 ORTHO05D000001 7.6e-09 64.3 171 33.9
ECA233G1773 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.9e-09 63.9 143 35.0
Nn6g34150 Nelumbo nucifera HOM05D000002 ORTHO05D000001 9.9e-09 63.9 141 36.9
Rhsim02G0093500 Rhododendron simsii HOM05D000002 ORTHO05D000001 9.9e-09 63.9 44 63.6
Rhsim03G0172600 Rhododendron simsii HOM05D000002 ORTHO05D000001 9.9e-09 63.9 38 71.1
Sopen05g010210 Solanum pennellii HOM05D000002 ORTHO05D000001 9.9e-09 63.9 170 33.5
Sopen10g016240 Solanum pennellii HOM05D000002 ORTHO05D000001 9.9e-09 63.9 170 33.5
Sopen10g031560 Solanum pennellii HOM05D000002 ORTHO05D000001 9.9e-09 63.9 170 33.5
Sopen11g010630 Solanum pennellii HOM05D000002 ORTHO05D000001 9.9e-09 63.9 170 33.5
CSS0015876 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-08 63.5 147 37.4
CSS0017873 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-08 63.5 146 39.7
CSS0027637 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-08 63.5 146 36.3
Rhsim09G0033700 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.3e-08 63.5 44 63.6
Rhsim08G0049500 Rhododendron simsii HOM05D004871 ORTHO05D005755 2.2e-08 62.8 44 61.4
CSS0012950 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.9e-08 62.4 179 32.4
CSS0032896 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.8e-08 62.0 173 34.7
Nn1g02421 Nelumbo nucifera HOM05D000002 ORTHO05D000001 4.9e-08 61.6 142 38.0
Sopen11g022020 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-08 61.6 171 35.1
CSS0015467 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.4e-08 60.8 130 36.2
Sopen12g017790 Solanum pennellii HOM05D000002 ORTHO05D000001 8.4e-08 60.8 142 38.0
CSS0014796 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-07 60.5 133 36.1
CSS0024524 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-07 60.5 132 36.4
ECA234G4446 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-07 60.1 143 35.7
FvH4_1g02351 Fragaria vesca HOM05D000002 ORTHO05D000001 1.4e-07 60.1 143 36.4
Sopen03g020180 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-07 60.1 170 34.1
CSS0024331 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-07 59.7 151 35.8
RcHm_v2.0_Chr5g0056061 Rosa chinensis HOM05D000002 ORTHO05D000001 1.9e-07 59.7 152 34.9
Sopen01g009120 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-07 59.7 83 49.4
ECA232G0373 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.4e-07 59.3 145 33.8
Hma1.2p1_0171F.1_g075850 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.4e-07 59.3 186 32.3
Nn2g15368 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.4e-07 59.3 46 67.4
TAR156G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.4e-07 59.3 138 34.8
Prupe.8G004800 Prunus persica HOM05D000002 ORTHO05D000001 3.2e-07 58.9 51 62.7
CSS0005727 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.5e-07 58.2 159 31.4
CANSAT01G2627 Cannabis sativa HOM05D000002 ORTHO05D000001 5.5e-07 58.2 48 70.8
Sopen09g023360 Solanum pennellii HOM05D000002 ORTHO05D000001 5.5e-07 58.2 128 39.1
TWI32G0787 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 5.5e-07 58.2 51 58.8
EL10Ac8g19578 Beta vulgaris HOM05D000002 ORTHO05D000001 7.1e-07 57.8 46 69.6
CSS0040283 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.3e-07 57.4 155 31.6
ECA246G4670 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.3e-07 57.4 145 33.1
RcHm_v2.0_Chr7g0198271 Rosa chinensis HOM05D000002 ORTHO05D000001 9.3e-07 57.4 150 34.7
CSS0012618 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-06 57.0 173 34.1
ECA240G3412 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-06 57.0 147 32.0
Manes.10G112229 Manihot esculenta HOM05D000002 ORTHO05D000001 1.6e-06 56.6 129 32.6
ECA240G1585 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.1e-06 56.2 148 34.5
FvH4_6g43841 Fragaria vesca HOM05D000002 ORTHO05D000001 2.1e-06 56.2 45 66.7
Nn5g28050 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.7e-06 55.8 45 66.7
CSS0002244 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.5e-06 55.5 48 58.3
Ca_24322_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.5e-06 55.5 142 35.2
Nn1g04039 Nelumbo nucifera HOM05D000002 ORTHO05D000001 3.5e-06 55.5 45 66.7
Nn1g08060 Nelumbo nucifera HOM05D000002 ORTHO05D000001 3.5e-06 55.5 51 56.9
Nn4g26284 Nelumbo nucifera HOM05D000002 ORTHO05D000001 4.6e-06 55.1 56 57.1
QL01p003494 Quercus lobata HOM05D000002 ORTHO05D000001 4.6e-06 55.1 123 33.3
CSS0016912 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.0e-06 54.7 151 32.5
ECA248G2341 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.0e-06 54.7 161 31.7
ECA240G2424 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.9e-06 54.3 146 30.8
Nn4g24384 Nelumbo nucifera HOM05D000002 ORTHO05D000001 7.9e-06 54.3 56 55.4


User provided reference genes

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