Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G904.2 Capsicum annuum HOM05D005331 ORTHO05D018710 4.3e-56 221.1 111 100.0
CAN.G567.46 Capsicum annuum HOM05D005331 ORTHO05D007596 7.1e-43 177.2 95 95.8
Nitab4.5_0010448g0040 Nicotiana tabacum HOM05D005331 ORTHO05D007596 1.1e-40 169.9 95 91.6
Sopen09g026840 Solanum pennellii HOM05D005331 ORTHO05D007596 8.1e-39 163.7 95 89.5
Nitab4.5_0001028g0020 Nicotiana tabacum HOM05D005331 ORTHO05D007596 1.1e-38 163.3 94 90.4
Peaxi162Scf01622g00017 Petunia axillaris HOM05D005331 ORTHO05D007596 1.5e-37 159.5 95 85.3
Solyc09g065120.4 Solanum lycopersicum HOM05D005331 ORTHO05D007596 1.5e-37 159.5 95 87.4
Nn1g02210 Nelumbo nucifera HOM05D005331 ORTHO05D007596 5.6e-32 141.0 102 73.5
Haze_04717 Corylus avellana HOM05D005331 ORTHO05D007596 6.2e-31 137.5 86 79.1
ClCG07G000230 Citrullus lanatus HOM05D005331 ORTHO05D007596 1.8e-30 136.0 94 74.5
CSS0010605 Camellia sinensis var. sinensis HOM05D005331 ORTHO05D007596 2.4e-30 135.6 94 72.3
CSS0033819 Camellia sinensis var. sinensis HOM05D005331 ORTHO05D007596 2.4e-30 135.6 94 72.3
Actinidia24888 Actinidia chinensis HOM05D005331 ORTHO05D007596 3.1e-30 135.2 87 75.9
TAR633G1479 Trochodendron aralioides HOM05D005331 ORTHO05D007596 3.1e-30 135.2 105 68.6
GSVIVG01011128001 Vitis vinifera HOM05D005331 ORTHO05D007596 3.1e-30 135.2 83 78.3
CsaV3_6G037090 Cucumis sativus L. HOM05D005331 ORTHO05D007596 6.9e-30 134.0 94 73.4
Manes.05G075600 Manihot esculenta HOM05D005331 ORTHO05D007596 6.9e-30 134.0 83 79.5
Sed0009831 Sechium edule HOM05D005331 ORTHO05D007596 6.9e-30 134.0 94 73.4
Atru.chr5.1429 Acer truncatum HOM05D005331 ORTHO05D007596 9.0e-30 133.7 86 76.7
PSO302G0146 Papaver somniferum HOM05D005331 ORTHO05D007596 1.2e-29 133.3 98 72.4
Thecc.01G280200 Theobroma cacao HOM05D005331 ORTHO05D007596 1.5e-29 132.9 93 75.3
MELO3C014403.2 Cucumis melo HOM05D005331 ORTHO05D007596 2.6e-29 132.1 93 73.1
PSO170G4087 Papaver somniferum HOM05D005331 ORTHO05D007596 5.8e-29 131.0 88 76.1
Cpa.g.sc52.30 Carica papaya HOM05D005331 ORTHO05D007596 7.6e-29 130.6 100 68.0
Rhsim01G0275000 Rhododendron simsii HOM05D005331 ORTHO05D007596 9.9e-29 130.2 93 68.8
TWI14G1044 Tripterygium wilfordii HOM05D005331 ORTHO05D007596 1.3e-28 129.8 95 69.5
Ciclev10023848m.g Citrus clementina HOM05D005331 ORTHO05D007596 1.7e-28 129.4 93 71.0
Migut.N02164 Erythranthe guttata HOM05D005331 ORTHO05D007596 2.2e-28 129.0 80 78.8
Gorai.008G004800 Gossypium raimondii HOM05D005331 ORTHO05D007596 2.2e-28 129.0 100 70.0
Aa31LG5G5400 Aethionema arabicum HOM05D005331 ORTHO05D007596 2.9e-28 128.6 103 65.0
CiPaw.08G104900 Carya illinoinensis HOM05D005331 ORTHO05D007596 2.9e-28 128.6 83 75.9
Glyma.03G153100 Glycine max HOM05D005331 ORTHO05D007596 2.9e-28 128.6 88 75.0
Glyma.19G155500 Glycine max HOM05D005331 ORTHO05D007596 2.9e-28 128.6 90 73.3
QL12p021971 Quercus lobata HOM05D005331 ORTHO05D007596 2.9e-28 128.6 84 75.0
Cc01_g19540 Coffea canephora HOM05D005331 ORTHO05D007596 3.8e-28 128.3 83 77.1
Phvul.001G150500 Phaseolus vulgaris HOM05D005331 ORTHO05D007596 4.9e-28 127.9 81 80.2
Potri.002G053900 Populus trichocarpa HOM05D005331 ORTHO05D007596 4.9e-28 127.9 94 69.1
Gohir.A12G005400 Gossypium hirsutum HOM05D005331 ORTHO05D007596 6.4e-28 127.5 81 79.0
Sabra02G0043800 Salix brachista HOM05D005331 ORTHO05D007596 6.4e-28 127.5 94 69.1
THA.LOC104817518 Tarenaya hassleriana HOM05D005331 ORTHO05D007596 6.4e-28 127.5 78 76.9
COL.COLO4_09103 Corchorus olitorius HOM05D005331 ORTHO05D007596 8.4e-28 127.1 81 77.8
Lj1g0019807 Lotus japonicus HOM05D005331 ORTHO05D007596 1.1e-27 126.7 75 84.0
Gohir.D12G004900 Gossypium hirsutum HOM05D005331 ORTHO05D007596 1.4e-27 126.3 100 69.0
MD11G1286500 Malus domestica HOM05D005331 ORTHO05D007596 1.4e-27 126.3 94 71.3
VMungo1383G2522 Vigna mungo HOM05D005331 ORTHO05D007596 1.4e-27 126.3 77 83.1
MD03G1266100 Malus domestica HOM05D005331 ORTHO05D007596 1.9e-27 125.9 94 71.3
Psat3g064480 Pisum sativum HOM05D005331 ORTHO05D007596 1.9e-27 125.9 90 68.9
Oeu028078.2 Olea europaea HOM05D005331 ORTHO05D007596 2.4e-27 125.6 83 71.1
Ca_08578_v3 Cicer arietinum L. HOM05D005331 ORTHO05D007596 4.2e-27 124.8 92 67.4
EL10Ac4g08368 Beta vulgaris HOM05D005331 ORTHO05D007596 5.5e-27 124.4 93 68.8
Duzib138G0982 Durio zibethinus HOM05D005331 ORTHO05D007596 5.5e-27 124.4 95 69.5
PGR044G2121 Punica granatum HOM05D005331 ORTHO05D007596 5.5e-27 124.4 85 69.4
Thhalv10016447m.g Eutrema salsugineum HOM05D005331 ORTHO05D007596 7.1e-27 124.0 100 68.0
CANSAT25G3094 Cannabis sativa HOM05D005331 ORTHO05D007596 9.3e-27 123.6 85 70.6
RcHm_v2.0_Chr6g0291131 Rosa chinensis HOM05D005331 ORTHO05D007596 9.3e-27 123.6 69 88.4
Ah.04g164200 Amaranthus hybridus HOM05D005331 ORTHO05D007596 1.2e-26 123.2 92 66.3
Eucgr.K03374 Eucalyptus grandis HOM05D005331 ORTHO05D007596 1.6e-26 122.9 93 69.9
TPR.G6149 Trifolium pratense HOM05D005331 ORTHO05D007596 1.6e-26 122.9 81 74.1
Prupe.8G241800 Prunus persica HOM05D005331 ORTHO05D007596 2.1e-26 122.5 75 81.3
BcaB01g04039 Brassica carinata HOM05D005331 ORTHO05D007596 2.7e-26 122.1 91 68.1
CARHR125170 Cardamine hirsuta HOM05D005331 ORTHO05D007596 2.7e-26 122.1 101 66.3
Medtr7g094800 Medicago truncatula HOM05D005331 ORTHO05D007596 3.5e-26 121.7 76 77.6
BcaC01g05946 Brassica carinata HOM05D005331 ORTHO05D007596 4.6e-26 121.3 93 67.7
C03p20770 Brassica napus HOM05D005331 ORTHO05D007596 4.6e-26 121.3 93 67.7
FAN15G1459 Fragaria x ananassa HOM05D005331 ORTHO05D007596 6.0e-26 120.9 76 78.9
FAN20G2110 Fragaria x ananassa HOM05D005331 ORTHO05D007596 6.0e-26 120.9 76 78.9
FAN24G2921 Fragaria x ananassa HOM05D005331 ORTHO05D007596 6.0e-26 120.9 76 78.9
AL4G26780 Arabidopsis lyrata HOM05D005331 ORTHO05D007596 7.9e-26 120.6 94 66.0
AUR62015257 Chenopodium quinoa HOM05D005331 ORTHO05D007596 7.9e-26 120.6 94 64.9
Aqoxy2G03313 Aquilegia oxysepala HOM05D005331 ORTHO05D007596 1.0e-25 120.2 71 83.1
AT2G31530 Arabidopsis thaliana HOM05D005331 ORTHO05D007596 1.0e-25 120.2 94 67.0
arahy.Tifrunner.gnm1.ann1.BTF7DQ Arachis hypogaea HOM05D005331 ORTHO05D007596 1.0e-25 120.2 73 79.5
arahy.Tifrunner.gnm1.ann1.Z72PTZ Arachis hypogaea HOM05D005331 ORTHO05D007596 1.0e-25 120.2 73 79.5
Sp4g13980 Schrenkiella parvula HOM05D005331 ORTHO05D007596 1.0e-25 120.2 96 67.7
A03p17680 Brassica napus HOM05D005331 ORTHO05D007596 1.3e-25 119.8 93 65.6
CDE04G0111 Ceratophyllum demersum HOM05D005331 ORTHO05D007596 1.3e-25 119.8 95 63.2
DCAR_012471 Daucus carota HOM05D005331 ORTHO05D007596 1.3e-25 119.8 83 66.3
BraA03t11033Z Brassica rapa HOM05D005331 ORTHO05D007596 1.8e-25 119.4 73 78.1
AUR62018058 Chenopodium quinoa HOM05D005331 ORTHO05D007596 2.3e-25 119.0 93 67.7
BolC3t14446H Brassica oleracea HOM05D005331 ORTHO05D007596 3.0e-25 118.6 93 66.7
Carub.0004s1284 Capsella rubella HOM05D005331 ORTHO05D007596 5.1e-25 117.9 91 65.9
ECA247G2661 Erigeron canadensis HOM05D005331 ORTHO05D007596 5.1e-25 117.9 84 69.0
ATR0626G344 Amborella trichopoda HOM05D005331 ORTHO05D007596 8.7e-25 117.1 95 63.2
Lsat_1_v5_gn_9_3840 Lactuca sativa HOM05D005331 ORTHO05D007596 8.7e-25 117.1 75 78.7
Lj2A469T42 Lonicera japonica HOM05D005331 ORTHO05D007596 1.1e-24 116.7 93 63.4
HPP92_001334 Vanilla planifolia HOM05D005331 ORTHO05D007596 1.9e-24 115.9 77 70.1
HanXRQChr13g0386871 Helianthus annuus HOM05D005331 ORTHO05D007596 4.3e-24 114.8 92 65.2
HanXRQChr10g0282731 Helianthus annuus HOM05D005331 ORTHO05D007596 5.6e-24 114.4 92 65.2
Lalb_Chr01g0013751 Lupinus albus HOM05D005331 ORTHO05D007596 5.6e-24 114.4 76 75.0
SalBow6G0673 Salvia bowleyana HOM05D005331 ORTHO05D007596 7.4e-24 114.0 79 65.8
Sc24g0003040 Simmondsia chinensis HOM05D005331 ORTHO05D007596 7.4e-24 114.0 86 65.1
Hund10478 Selenicereus undatus HOM05D005331 ORTHO05D007596 1.6e-23 112.8 95 58.9
DCAR_032170 Daucus carota HOM05D005331 ORTHO05D007596 2.8e-23 112.1 83 62.7
HPP92_001779 Vanilla planifolia HOM05D005331 ORTHO05D018710 4.8e-23 111.3 69 75.4
SGA_v2.0_scaffold81G25989 Striga asiatica HOM05D005331 ORTHO05D007596 6.2e-23 110.9 76 67.1
SEGI_01497 Sequoiadendron giganteum HOM05D005331 ORTHO05D007596 1.1e-19 100.1 72 65.3
C06p10110 Brassica napus HOM05D005331 ORTHO05D018710 2.5e-19 99.0 70 71.4
Mapoly0002s0128 Marchantia polymorpha HOM05D005331 ORTHO05D007596 7.1e-19 97.4 71 64.8
Zm00001eb287470 Zea mays HOM05D005331 ORTHO05D007596 9.3e-19 97.1 91 57.1
Os05g0397700 Oryza sativa ssp. japonica HOM05D005331 ORTHO05D007596 3.5e-18 95.1 91 53.8
A10p17750 Brassica napus HOM05D005331 ORTHO05D018710 4.6e-18 94.7 58 79.3
Pp3c15_8820 Physcomitrium patens HOM05D005331 ORTHO05D007596 1.3e-17 93.2 72 63.9
CBR_g25857 Chara braunii HOM05D005331 ORTHO05D007596 1.2e-13 80.1 73 49.3
SMO367G0256 Selaginella moellendorffii HOM05D005331 ORTHO05D007596 2.6e-13 79.0 96 38.5
AagrBONN_evm.TU.Sc2ySwM_344.2919 Anthoceros agrestis HOM05D005331 ORTHO05D007596 5.9e-13 77.8 72 50.0
SMO275G0046 Selaginella moellendorffii HOM05D005331 ORTHO05D007596 7.6e-13 77.4 94 38.3
BraA09t41203Z Brassica rapa HOM05D005331 ORTHO05D018710 5.5e-11 71.2 44 75.0
Dinv34748 Davidia involucrata HOM05D005331 ORTHO05D007596 3.6e-10 68.6 48 66.7
BraA04t16189Z Brassica rapa HOM05D005331 ORTHO05D018710 2.3e-09 65.9 44 72.7
vmacro14920 Vaccinium macrocarpon HOM05D005331 ORTHO05D007596 1.1e-06 57.0 30 83.3
C04p60930 Brassica napus HOM05D005331 ORTHO05D097229 2.4e-06 55.8 95 36.8


User provided reference genes

Program Settings