Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G904.10 Capsicum annuum HOM05D007635 ORTHO05D009612 5.5e-84 314.3 165 100.0
Solyc10g007670.4 Solanum lycopersicum HOM05D007635 ORTHO05D009612 3.2e-63 245.4 166 83.1
Sopen10g003580 Solanum pennellii HOM05D007635 ORTHO05D009612 9.2e-63 243.8 167 83.8
PGSC0003DMG400021288 Solanum tuberosum HOM05D007635 ORTHO05D009612 1.2e-62 243.4 166 82.5
Nitab4.5_0000923g0190 Nicotiana tabacum HOM05D007635 ORTHO05D009612 4.6e-54 214.9 161 78.3
Peaxi162Scf00035g02213 Petunia axillaris HOM05D007635 ORTHO05D009612 1.0e-53 213.8 168 75.6
Nitab4.5_0002209g0110 Nicotiana tabacum HOM05D007635 ORTHO05D009612 7.3e-44 181.0 165 67.9
Ah.05g169970 Amaranthus hybridus HOM05D007635 ORTHO05D009612 1.3e-40 170.2 128 68.8
MSTRG.12845 Avicennia marina HOM05D007635 ORTHO05D009612 1.7e-40 169.9 121 75.2
unitig_26.g8994 Utricularia gibba HOM05D007635 ORTHO05D009612 1.7e-40 169.9 99 83.8
Cc05_g09950 Coffea canephora HOM05D007635 ORTHO05D009612 2.4e-39 166.0 137 65.7
GSVIVG01030149001 Vitis vinifera HOM05D007635 ORTHO05D009612 4.1e-39 165.2 99 79.8
QL07p037425 Quercus lobata HOM05D007635 ORTHO05D009612 5.4e-39 164.9 116 72.4
Dinv26633 Davidia involucrata HOM05D007635 ORTHO05D009612 9.2e-39 164.1 99 80.8
AUR62027757 Chenopodium quinoa HOM05D007635 ORTHO05D009612 2.1e-38 162.9 99 78.8
Ciclev10006014m.g Citrus clementina HOM05D007635 ORTHO05D009612 3.5e-38 162.2 93 83.9
AUR62038521 Chenopodium quinoa HOM05D007635 ORTHO05D009612 6.0e-38 161.4 109 72.5
TAR374G1245 Trochodendron aralioides HOM05D007635 ORTHO05D009612 6.0e-38 161.4 99 78.8
CARHR127160 Cardamine hirsuta HOM05D007635 ORTHO05D009612 2.3e-37 159.5 133 64.7
Manes.15G049600 Manihot esculenta HOM05D007635 ORTHO05D009612 2.3e-37 159.5 95 80.0
CSS0021722 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 3.0e-37 159.1 99 77.8
CSS0041027 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 3.0e-37 159.1 99 77.8
Nn1g07615 Nelumbo nucifera HOM05D007635 ORTHO05D009612 3.0e-37 159.1 134 63.4
ATR0751G143 Amborella trichopoda HOM05D007635 ORTHO05D009612 3.9e-37 158.7 157 58.0
SGA_v2.0_scaffold130G34228 Striga asiatica HOM05D007635 ORTHO05D009612 6.6e-37 157.9 111 75.7
Medtr7g105840 Medicago truncatula HOM05D007635 ORTHO05D009612 8.6e-37 157.5 123 67.5
Aa31LG5G4080 Aethionema arabicum HOM05D007635 ORTHO05D009612 1.9e-36 156.4 97 77.3
CiPaw.09G019400 Carya illinoinensis HOM05D007635 ORTHO05D009612 1.9e-36 156.4 152 55.9
Duzib268G0659 Durio zibethinus HOM05D007635 ORTHO05D009612 1.9e-36 156.4 95 80.0
CANSAT64G1146 Cannabis sativa HOM05D007635 ORTHO05D009612 2.5e-36 156.0 93 79.6
Sc26g0000090 Simmondsia chinensis HOM05D007635 ORTHO05D009612 2.5e-36 156.0 129 64.3
Glyma.19G198300 Glycine max HOM05D007635 ORTHO05D009612 3.3e-36 155.6 148 60.1
VMungo1383G2560 Vigna mungo HOM05D007635 ORTHO05D009612 3.3e-36 155.6 119 68.9
BcaB06g28657 Brassica carinata HOM05D007635 ORTHO05D009612 4.3e-36 155.2 139 59.7
Lalb_Chr20g0111441 Lupinus albus HOM05D007635 ORTHO05D009612 4.3e-36 155.2 102 74.5
arahy.Tifrunner.gnm1.ann1.X3I9NV Arachis hypogaea HOM05D007635 ORTHO05D009612 5.6e-36 154.8 112 70.5
BraA04t18051Z Brassica rapa HOM05D007635 ORTHO05D009612 5.6e-36 154.8 139 59.0
Cfa016671 Carpinus fangiana HOM05D003127 ORTHO05D003709 7.3e-36 154.5 117 67.5
Haze_19686 Corylus avellana HOM05D007635 ORTHO05D009612 9.6e-36 154.1 145 58.6
CsaV3_3G037770 Cucumis sativus L. HOM05D007635 ORTHO05D009612 9.6e-36 154.1 119 66.4
Glyma.03G200700 Glycine max HOM05D007635 ORTHO05D009612 9.6e-36 154.1 140 59.3
Lsat_1_v5_gn_7_99401 Lactuca sativa HOM05D007635 ORTHO05D009612 1.2e-35 153.7 130 61.5
PGR142G1826 Punica granatum HOM05D007635 ORTHO05D009612 1.2e-35 153.7 93 78.5
PSO541G5044 Papaver somniferum HOM05D007635 ORTHO05D009612 1.6e-35 153.3 93 77.4
Prupe.7G097800 Prunus persica HOM05D007635 ORTHO05D009612 1.6e-35 153.3 158 54.4
Eucgr.K02034 Eucalyptus grandis HOM05D007635 ORTHO05D009612 2.1e-35 152.9 93 78.5
Sp4g15480 Schrenkiella parvula HOM05D007635 ORTHO05D009612 2.1e-35 152.9 139 59.0
BcaC02g07856 Brassica carinata HOM05D007635 ORTHO05D009612 2.8e-35 152.5 139 57.6
A04p25480 Brassica napus HOM05D007635 ORTHO05D009612 2.8e-35 152.5 96 77.1
BolC4t27744H Brassica oleracea HOM05D007635 ORTHO05D009612 2.8e-35 152.5 139 57.6
Eucgr.L01778 Eucalyptus grandis HOM05D007635 ORTHO05D009612 2.8e-35 152.5 93 78.5
RcHm_v2.0_Chr3g0475481 Rosa chinensis HOM05D007635 ORTHO05D009612 2.8e-35 152.5 93 77.4
AL4G28740 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 3.6e-35 152.1 133 61.7
AL569U10010 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 3.6e-35 152.1 133 61.7
Gorai.011G162800 Gossypium raimondii HOM05D007635 ORTHO05D009612 3.6e-35 152.1 95 76.8
Psat3g030120 Pisum sativum HOM05D003127 ORTHO05D003709 3.6e-35 152.1 102 74.5
Potri.001G053700 Populus trichocarpa HOM05D007635 ORTHO05D009612 3.6e-35 152.1 95 75.8
Zm00001eb101710 Zea mays HOM05D007635 ORTHO05D009612 3.6e-35 152.1 108 71.3
AT2G33180 Arabidopsis thaliana HOM05D007635 ORTHO05D009612 6.2e-35 151.4 133 61.7
TPR.G23321 Trifolium pratense HOM05D007635 ORTHO05D009612 6.2e-35 151.4 141 59.6
C04p62620 Brassica napus HOM05D007635 ORTHO05D009612 8.1e-35 151.0 139 57.6
Ca_09045_v3 Cicer arietinum L. HOM05D007635 ORTHO05D009612 1.1e-34 150.6 93 75.3
Phvul.001G194300 Phaseolus vulgaris HOM05D007635 ORTHO05D009612 1.1e-34 150.6 119 66.4
SEGI_23489 Sequoiadendron giganteum HOM05D007635 ORTHO05D009612 1.1e-34 150.6 140 57.9
Actinidia12337 Actinidia chinensis HOM05D007635 ORTHO05D009612 1.4e-34 150.2 148 57.4
Carub.0004s1461 Capsella rubella HOM05D007635 ORTHO05D009612 1.8e-34 149.8 96 75.0
COL.COLO4_05721 Corchorus olitorius HOM05D001044 ORTHO05D007204 1.8e-34 149.8 138 60.9
ECA236G3620 Erigeron canadensis HOM05D007635 ORTHO05D009612 1.8e-34 149.8 103 71.8
FAN02G0889 Fragaria x ananassa HOM05D007635 ORTHO05D009612 1.8e-34 149.8 93 76.3
FAN05G0948 Fragaria x ananassa HOM05D007635 ORTHO05D009612 1.8e-34 149.8 93 76.3
PSO675G5663 Papaver somniferum HOM05D007635 ORTHO05D009612 1.8e-34 149.8 173 49.7
Thhalv10017331m.g Eutrema salsugineum HOM05D007635 ORTHO05D009612 2.4e-34 149.4 139 57.6
FvH4_6g20030 Fragaria vesca HOM05D007635 ORTHO05D009612 4.0e-34 148.7 93 75.3
FAN09G2965 Fragaria x ananassa HOM05D007635 ORTHO05D009612 4.0e-34 148.7 93 75.3
FAN14G1263 Fragaria x ananassa HOM05D007635 ORTHO05D009612 4.0e-34 148.7 93 75.3
Rhsim06G0182000 Rhododendron simsii HOM05D007635 ORTHO05D009612 5.2e-34 148.3 103 71.8
Rhsim06G0183000 Rhododendron simsii HOM05D007635 ORTHO05D009612 5.2e-34 148.3 103 71.8
Os09g0481800 Oryza sativa ssp. japonica HOM05D007635 ORTHO05D009612 6.9e-34 147.9 133 58.6
ClCG10G018500 Citrullus lanatus HOM05D003127 ORTHO05D003709 1.5e-33 146.7 111 66.7
Lj1g0026019 Lotus japonicus HOM05D007635 ORTHO05D009612 2.0e-33 146.4 102 70.6
MBI15_g36010_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 2.0e-33 146.4 132 62.9
TWI09G0209 Tripterygium wilfordii HOM05D007635 ORTHO05D009612 2.0e-33 146.4 149 56.4
MBI15_g47427_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 3.4e-33 145.6 122 63.9
Pp3c11_15670 Physcomitrium patens HOM05D007635 ORTHO05D009612 1.9e-31 139.8 98 68.4
CBR_g50773 Chara braunii HOM05D007635 ORTHO05D009612 3.2e-31 139.0 93 69.9
vmacro12032 Vaccinium macrocarpon HOM05D007635 ORTHO05D009612 3.2e-31 139.0 116 63.8
AagrBONN_evm.TU.Sc2ySwM_362.2476 Anthoceros agrestis HOM05D007635 ORTHO05D009612 1.3e-29 133.7 98 66.3
EL10Ac1g01217 Beta vulgaris HOM05D007635 ORTHO05D009612 8.7e-29 131.0 80 78.8
Aqoxy2G03911 Aquilegia oxysepala HOM05D007635 ORTHO05D009612 2.1e-27 126.3 157 47.8
Atru.BG.99.p Acer truncatum HOM05D007635 ORTHO05D009612 2.8e-27 125.9 71 81.7
HanXRQChr11g0329581 Helianthus annuus HOM05D007635 ORTHO05D009612 6.4e-24 114.8 64 82.8
MD12G1037400 Malus domestica HOM05D007635 ORTHO05D009612 8.4e-24 114.4 72 72.2
Migut.H02083 Erythranthe guttata HOM05D007635 ORTHO05D009612 3.2e-23 112.5 136 51.5
Cpa.g.sc59.77 Carica papaya HOM05D007635 ORTHO05D009612 7.1e-23 111.3 67 77.6
Sed0019283 Sechium edule HOM05D003127 ORTHO05D003709 2.1e-22 109.8 75 70.7
HPP92_017857 Vanilla planifolia HOM05D007635 ORTHO05D009612 2.7e-22 109.4 75 70.7
MELO3C009519.2 Cucumis melo HOM05D003127 ORTHO05D003709 1.0e-21 107.5 63 77.8
FAN05G1739 Fragaria x ananassa HOM05D007635 ORTHO05D009612 3.9e-21 105.5 62 75.8
Pp3c11_15610 Physcomitrium patens HOM05D007635 ORTHO05D009612 1.8e-18 96.7 62 71.0


User provided reference genes

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