Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G903.4 Capsicum annuum HOM05D002265 ORTHO05D002400 6.0e-135 484.2 247 100.0
CAN.G1709.1 Capsicum annuum HOM05D002265 ORTHO05D002400 3.3e-64 249.2 302 55.3
CAN.G1237.28 Capsicum annuum HOM05D002265 ORTHO05D002400 6.6e-49 198.4 364 42.0
Solyc04g017750.4 Solanum lycopersicum HOM05D002265 ORTHO05D002400 9.6e-40 167.9 112 79.5
Sopen04g008940 Solanum pennellii HOM05D002265 ORTHO05D002400 9.6e-40 167.9 112 79.5
Nitab4.5_0005031g0040 Nicotiana tabacum HOM05D002265 ORTHO05D002400 5.6e-32 142.1 312 38.1
Nitab4.5_0001618g0010 Nicotiana tabacum HOM05D002265 ORTHO05D002400 2.6e-29 133.3 118 66.1
Peaxi162Scf00130g01217 Petunia axillaris HOM05D002265 ORTHO05D002400 4.5e-21 105.9 109 56.9
Nitab4.5_0004127g0020 Nicotiana tabacum HOM05D002265 ORTHO05D002400 1.1e-16 91.3 116 49.1
Dinv18477 Davidia involucrata HOM05D002265 ORTHO05D002400 8.2e-15 85.1 94 56.4
Solyc10g079790.1 Solanum lycopersicum HOM05D002265 ORTHO05D002400 8.2e-15 85.1 117 48.7
Peaxi162Scf00648g00313 Petunia axillaris HOM05D002265 ORTHO05D002400 2.6e-13 80.1 99 51.5
Sopen10g030410 Solanum pennellii HOM05D002265 ORTHO05D002400 4.5e-13 79.3 114 46.5
PGSC0003DMG400029849 Solanum tuberosum HOM05D002265 ORTHO05D002400 4.5e-13 79.3 113 46.0
Medtr7g090500 Medicago truncatula HOM05D002265 ORTHO05D002400 2.2e-12 77.0 82 51.2
Haze_19766 Corylus avellana HOM05D002265 ORTHO05D002400 1.9e-11 73.9 93 48.4
TWI53G1000 Tripterygium wilfordii HOM05D002265 ORTHO05D002400 1.9e-11 73.9 108 44.4
Atru.chr1.1260 Acer truncatum HOM05D002265 ORTHO05D002400 2.5e-11 73.6 130 40.8
Ciclev10004157m.g Citrus clementina HOM05D002265 ORTHO05D002400 2.5e-11 73.6 78 51.3
Oeu033032.2 Olea europaea HOM05D002265 ORTHO05D002400 3.2e-11 73.2 66 59.1
Psat3g076400 Pisum sativum HOM05D002265 ORTHO05D002400 7.2e-11 72.0 108 40.7
Ca_08415_v3 Cicer arietinum L. HOM05D002265 ORTHO05D002400 9.3e-11 71.6 115 40.9
TPR.G32730 Trifolium pratense HOM05D002265 ORTHO05D002400 1.2e-10 71.2 99 43.4
GSVIVG01033565001 Vitis vinifera HOM05D002265 ORTHO05D000863 1.2e-10 71.2 125 39.2
Manes.08G055800 Manihot esculenta HOM05D002265 ORTHO05D002400 1.6e-10 70.9 105 41.9
Oeu017892.1 Olea europaea HOM05D002265 ORTHO05D002400 1.6e-10 70.9 99 46.5
Actinidia39181 Actinidia chinensis HOM05D002265 ORTHO05D002400 2.1e-10 70.5 120 40.0
Glyma.03G131000 Glycine max HOM05D002265 ORTHO05D002400 2.1e-10 70.5 107 41.1
Potri.016G041100 Populus trichocarpa HOM05D002265 ORTHO05D002400 2.1e-10 70.5 113 37.2
RcHm_v2.0_Chr2g0124711 Rosa chinensis HOM05D002265 ORTHO05D002400 2.7e-10 70.1 75 52.0
Lj2A392T42 Lonicera japonica HOM05D002265 ORTHO05D002400 3.5e-10 69.7 62 61.3
Potri.006G043900 Populus trichocarpa HOM05D002265 ORTHO05D002400 3.5e-10 69.7 105 41.0
MSTRG.19828 Avicennia marina HOM05D002265 ORTHO05D002400 4.6e-10 69.3 68 55.9
FvH4_6g24980 Fragaria vesca HOM05D002265 ORTHO05D002400 6.1e-10 68.9 76 50.0
FAN14G5338 Fragaria x ananassa HOM05D002265 ORTHO05D002400 6.1e-10 68.9 76 50.0
Glyma.19G133000 Glycine max HOM05D002265 ORTHO05D002400 6.1e-10 68.9 105 41.0
Sed0013020 Sechium edule HOM05D002265 ORTHO05D002400 6.1e-10 68.9 79 51.9
CAN.G1656.12 Capsicum annuum HOM05D002265 ORTHO05D002400 7.9e-10 68.6 91 44.0
CsaV3_3G040840 Cucumis sativus L. HOM05D002265 ORTHO05D002400 7.9e-10 68.6 112 41.1
DCAR_013625 Daucus carota HOM05D002265 ORTHO05D002400 7.9e-10 68.6 62 61.3
Lj1g0002630 Lotus japonicus HOM05D002265 ORTHO05D002400 7.9e-10 68.6 101 40.6
Atru.chr1.1261 Acer truncatum HOM05D002265 ORTHO05D002400 1.0e-09 68.2 80 47.5
Thecc.05G143100 Theobroma cacao HOM05D002265 ORTHO05D002400 1.0e-09 68.2 67 55.2
MELO3C009820.2 Cucumis melo HOM05D002265 ORTHO05D002400 1.3e-09 67.8 115 40.9
Nitab4.5_0004127g0010 Nicotiana tabacum HOM05D002265 ORTHO05D002400 1.3e-09 67.8 114 41.2
CSS0016894 Camellia sinensis var. sinensis HOM05D002265 ORTHO05D002400 1.8e-09 67.4 110 40.0
Cfa016736 Carpinus fangiana HOM05D002265 ORTHO05D002400 1.8e-09 67.4 66 56.1
Cc06_g18510 Coffea canephora HOM05D002265 ORTHO05D002400 1.8e-09 67.4 119 39.5
Duzib128G0504 Durio zibethinus HOM05D002265 ORTHO05D002400 2.3e-09 67.0 80 50.0
Haze_19767 Corylus avellana HOM05D002265 ORTHO05D002400 3.0e-09 66.6 66 54.5
FAN05G2014 Fragaria x ananassa HOM05D002265 ORTHO05D002400 3.0e-09 66.6 76 50.0
ClCG10G015580 Citrullus lanatus HOM05D002265 ORTHO05D002400 3.9e-09 66.2 109 38.5
MD14G1082900 Malus domestica HOM05D002265 ORTHO05D002400 3.9e-09 66.2 67 50.7
Phvul.001G127000 Phaseolus vulgaris HOM05D002265 ORTHO05D002400 3.9e-09 66.2 108 38.9
Sabra16G0043900 Salix brachista HOM05D002265 ORTHO05D002400 3.9e-09 66.2 77 46.8
Sabra16G0047300 Salix brachista HOM05D002265 ORTHO05D002400 3.9e-09 66.2 113 38.9
Lalb_Chr25g0287001 Lupinus albus HOM05D002265 ORTHO05D002400 5.1e-09 65.9 209 31.1
VMungo1383G3245 Vigna mungo HOM05D002265 ORTHO05D002400 5.1e-09 65.9 109 38.5
CANSAT80G1944 Cannabis sativa HOM05D002265 ORTHO05D002400 6.7e-09 65.5 93 41.9
Prupe.7G047600 Prunus persica HOM05D002265 ORTHO05D002400 1.5e-08 64.3 77 44.2
Migut.J01689 Erythranthe guttata HOM05D002265 ORTHO05D002400 1.9e-08 63.9 104 39.4
FAN09G1166 Fragaria x ananassa HOM05D002265 ORTHO05D002400 1.9e-08 63.9 76 48.7
Gohir.A09G119500 Gossypium hirsutum HOM05D002265 ORTHO05D002400 1.9e-08 63.9 66 54.5
Oeu017900.1 Olea europaea HOM05D002265 ORTHO05D002400 1.9e-08 63.9 61 55.7
Rhsim03G0032700 Rhododendron simsii HOM05D002265 ORTHO05D002400 2.5e-08 63.5 110 37.3
Gohir.D09G115700 Gossypium hirsutum HOM05D002265 ORTHO05D002400 3.3e-08 63.2 64 54.7
Gorai.006G134000 Gossypium raimondii HOM05D002265 ORTHO05D002400 3.3e-08 63.2 64 54.7
Lsat_1_v5_gn_5_159761 Lactuca sativa HOM05D002265 ORTHO05D002400 3.3e-08 63.2 89 46.1
Phvul.005G031900 Phaseolus vulgaris HOM05D002265 ORTHO05D002400 3.3e-08 63.2 115 40.0
Sabra06G0030200 Salix brachista HOM05D002265 ORTHO05D002400 3.3e-08 63.2 77 48.1
COL.COLO4_34259 Corchorus olitorius HOM05D002265 ORTHO05D002400 4.3e-08 62.8 67 53.7
Rhsim03G0033200 Rhododendron simsii HOM05D002265 ORTHO05D002400 4.3e-08 62.8 76 50.0
ECA248G3739 Erigeron canadensis HOM05D002265 ORTHO05D002400 5.7e-08 62.4 115 44.3
CiPaw.10G037400 Carya illinoinensis HOM05D002265 ORTHO05D002400 9.7e-08 61.6 78 44.9
vmacro21944 Vaccinium macrocarpon HOM05D002265 ORTHO05D002400 9.7e-08 61.6 122 40.2
CiPaw.09G043600 Carya illinoinensis HOM05D002265 ORTHO05D002400 1.3e-07 61.2 105 41.9
QL07p004364 Quercus lobata HOM05D002265 ORTHO05D002400 1.3e-07 61.2 91 39.6
Aa31LG1G21310 Aethionema arabicum HOM05D002265 ORTHO05D002400 2.2e-07 60.5 121 33.1
CARHR209260 Cardamine hirsuta HOM05D002265 ORTHO05D002400 2.2e-07 60.5 89 38.2
TAR369G0190 Trochodendron aralioides HOM05D002265 ORTHO05D002400 2.2e-07 60.5 62 54.8
VMungo1080G1856 Vigna mungo HOM05D002265 ORTHO05D002400 2.8e-07 60.1 115 38.3
Manes.09G009350 Manihot esculenta HOM05D002265 ORTHO05D002400 4.8e-07 59.3 66 53.0
Dinv32049 Davidia involucrata HOM05D002265 ORTHO05D002400 6.3e-07 58.9 45 64.4
Sabra03G0148900 Salix brachista HOM05D002265 ORTHO05D002400 6.3e-07 58.9 130 36.9
HanXRQChr17g0545901 Helianthus annuus HOM05D002265 ORTHO05D002400 8.2e-07 58.5 111 39.6
Oeu017894.1 Olea europaea HOM05D002265 ORTHO05D002400 8.2e-07 58.5 108 39.8
SGA_v2.0_scaffold105G30338 Striga asiatica HOM05D002265 ORTHO05D002400 1.1e-06 58.2 69 50.7
Cpa.g.sc5.187 Carica papaya HOM05D002265 ORTHO05D002400 1.4e-06 57.8 82 42.7
PGR142G1568 Punica granatum HOM05D002265 ORTHO05D002400 1.4e-06 57.8 151 32.5
arahy.Tifrunner.gnm1.ann1.HURS1T Arachis hypogaea HOM05D002265 ORTHO05D002400 1.8e-06 57.4 109 38.5
Sp6g38740 Schrenkiella parvula HOM05D002265 ORTHO05D002400 1.8e-06 57.4 95 35.8
CiPaw.14G006100 Carya illinoinensis HOM05D002265 ORTHO05D002400 2.4e-06 57.0 115 37.4
Manes.11G002800 Manihot esculenta HOM05D002265 ORTHO05D002400 2.4e-06 57.0 44 61.4
CiPaw.13G010900 Carya illinoinensis HOM05D002265 ORTHO05D002400 3.1e-06 56.6 112 35.7
Dinv23654 Davidia involucrata HOM05D002265 ORTHO05D002400 3.1e-06 56.6 74 45.9
Eucgr.K01584 Eucalyptus grandis HOM05D002265 ORTHO05D002400 4.1e-06 56.2 77 44.2
Thhalv10012432m.g Eutrema salsugineum HOM05D002265 ORTHO05D002400 4.1e-06 56.2 124 31.5
AL6G13610 Arabidopsis lyrata HOM05D002265 ORTHO05D002400 5.3e-06 55.8 95 36.8
AT5G04020 Arabidopsis thaliana HOM05D002265 ORTHO05D002400 5.3e-06 55.8 95 35.8
Carub.0006s0295 Capsella rubella HOM05D002265 ORTHO05D002400 5.3e-06 55.8 95 35.8
Cfa010863 Carpinus fangiana HOM05D002265 ORTHO05D002400 5.3e-06 55.8 113 32.7
Manes.04G164600 Manihot esculenta HOM05D002265 ORTHO05D002400 5.3e-06 55.8 117 37.6
Sabra01G0018100 Salix brachista HOM05D002265 ORTHO05D002400 5.3e-06 55.8 112 38.4
COL.COLO4_25831 Corchorus olitorius HOM05D002265 ORTHO05D002400 9.0e-06 55.1 64 45.3
DCAR_003238 Daucus carota HOM05D002265 ORTHO05D002400 9.0e-06 55.1 45 60.0
Psat5g216960 Pisum sativum HOM05D002265 ORTHO05D002400 9.0e-06 55.1 58 50.0


User provided reference genes

Program Settings