Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G900.29 Capsicum annuum HOM05D006449 ORTHO05D007995 1.0e-66 256.5 121 100.0
Solyc09g008230.3 Solanum lycopersicum HOM05D006449 ORTHO05D007995 1.5e-62 242.7 121 94.2
Sopen09g003050 Solanum pennellii HOM05D006449 ORTHO05D007995 1.5e-62 242.7 121 94.2
PGSC0003DMG400003863 Solanum tuberosum HOM05D006449 ORTHO05D007995 2.6e-62 241.9 121 94.2
Peaxi162Scf00311g00119 Petunia axillaris HOM05D006449 ORTHO05D007995 3.1e-60 235.0 121 89.3
Nitab4.5_0000814g0040 Nicotiana tabacum HOM05D006449 ORTHO05D007995 4.1e-60 234.6 121 90.1
Nitab4.5_0003861g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 2.6e-59 231.9 121 89.3
Peaxi162Scf00638g00414 Petunia axillaris HOM05D006449 ORTHO05D007995 2.7e-56 221.9 121 87.6
Actinidia08770 Actinidia chinensis HOM05D006449 ORTHO05D007995 6.1e-56 220.7 119 82.4
CsaV3_6G039970 Cucumis sativus L. HOM05D006449 ORTHO05D007995 6.1e-56 220.7 119 85.7
EL10Ac7g16636 Beta vulgaris HOM05D006449 ORTHO05D007995 1.4e-55 219.5 119 83.2
Nn6g35286 Nelumbo nucifera HOM05D006449 ORTHO05D007995 1.8e-55 219.2 119 82.4
HanXRQChr15g0491571 Helianthus annuus HOM05D006449 ORTHO05D007995 3.0e-55 218.4 119 82.4
PGR004G0793 Punica granatum HOM05D006449 ORTHO05D007995 3.0e-55 218.4 119 84.9
Sed0015731 Sechium edule HOM05D006449 ORTHO05D007995 3.0e-55 218.4 119 84.9
Ca_11505_v3 Cicer arietinum L. HOM05D006449 ORTHO05D007995 4.0e-55 218.0 119 84.0
ClCG04G009390 Citrullus lanatus HOM05D006449 ORTHO05D007995 5.2e-55 217.6 119 84.9
Manes.09G065800 Manihot esculenta HOM05D006449 ORTHO05D007995 6.7e-55 217.2 119 81.5
Psat6g074040 Pisum sativum HOM05D006449 ORTHO05D007995 8.8e-55 216.9 119 83.2
CSS0028691 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 1.5e-54 216.1 119 82.4
CiPaw.10G129500 Carya illinoinensis HOM05D006449 ORTHO05D007995 1.5e-54 216.1 118 83.9
Glyma.10G055200 Glycine max HOM05D006449 ORTHO05D007995 2.0e-54 215.7 119 80.7
Phvul.007G219000 Phaseolus vulgaris HOM05D006449 ORTHO05D007995 2.0e-54 215.7 119 83.2
MSTRG.5764 Avicennia marina HOM05D006449 ORTHO05D007995 5.7e-54 214.2 119 82.4
DCAR_015000 Daucus carota HOM05D006449 ORTHO05D007995 5.7e-54 214.2 120 83.3
TPR.G11267 Trifolium pratense HOM05D006449 ORTHO05D007995 5.7e-54 214.2 119 81.5
Glyma.13G142300 Glycine max HOM05D006449 ORTHO05D007995 1.3e-53 213.0 119 79.8
AUR62042508 Chenopodium quinoa HOM05D006449 ORTHO05D007995 2.2e-53 212.2 119 79.8
Nn2g13802 Nelumbo nucifera HOM05D006449 ORTHO05D007995 2.8e-53 211.8 119 79.8
VMungo0720G3134 Vigna mungo HOM05D006449 ORTHO05D007995 2.8e-53 211.8 119 81.5
Medtr1g063190 Medicago truncatula HOM05D006449 ORTHO05D007995 3.7e-53 211.5 119 80.7
ECA248G0052 Erigeron canadensis HOM05D006449 ORTHO05D007995 4.8e-53 211.1 119 82.4
Hma1.2p1_0205F.1_g086990 Hydrangea macrophylla HOM05D006449 ORTHO05D007995 6.3e-53 210.7 119 79.8
TWI77G0881 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 6.3e-53 210.7 117 82.9
Lj5g0001377 Lotus japonicus HOM05D006449 ORTHO05D007995 8.2e-53 210.3 119 80.7
AUR62040339 Chenopodium quinoa HOM05D006449 ORTHO05D007995 1.1e-52 209.9 119 79.0
Thecc.05G067500 Theobroma cacao HOM05D006449 ORTHO05D007995 4.1e-52 208.0 119 79.8
TWI74G0214 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 4.1e-52 208.0 117 82.1
Oeu041490.2 Olea europaea HOM05D006449 ORTHO05D007995 7.0e-52 207.2 126 80.2
Atru.chr8.1798 Acer truncatum HOM05D006449 ORTHO05D007995 9.1e-52 206.8 117 80.3
Hund26578 Selenicereus undatus HOM05D006449 ORTHO05D007995 1.2e-51 206.5 119 77.3
FAN05G0981 Fragaria x ananassa HOM05D006449 ORTHO05D007995 3.5e-51 204.9 121 81.8
FAN14G2797 Fragaria x ananassa HOM05D006449 ORTHO05D007995 3.5e-51 204.9 121 81.8
FAN14G3008 Fragaria x ananassa HOM05D006449 ORTHO05D007995 3.5e-51 204.9 121 81.8
Aqoxy1G01150 Aquilegia oxysepala HOM05D006449 ORTHO05D007995 5.9e-51 204.1 119 78.2
RcHm_v2.0_Chr3g0470301 Rosa chinensis HOM05D006449 ORTHO05D007995 5.9e-51 204.1 120 82.5
Gorai.002G246900 Gossypium raimondii HOM05D006449 ORTHO05D007995 7.7e-51 203.8 119 78.2
Hund20380 Selenicereus undatus HOM05D006449 ORTHO05D007995 7.7e-51 203.8 119 76.5
FvH4_6g16440 Fragaria vesca HOM05D006449 ORTHO05D007995 1.0e-50 203.4 121 81.0
Duzib093G0849 Durio zibethinus HOM05D006449 ORTHO05D007995 1.3e-50 203.0 119 77.3
FAN02G2429 Fragaria x ananassa HOM05D006449 ORTHO05D007995 1.7e-50 202.6 121 81.0
Gohir.A01G213500 Gossypium hirsutum HOM05D006449 ORTHO05D007995 1.1e-49 199.9 119 76.5
Gohir.D01G202200 Gossypium hirsutum HOM05D006449 ORTHO05D007995 1.9e-49 199.1 119 77.3
Potri.016G093500 Populus trichocarpa HOM05D006449 ORTHO05D007995 2.5e-49 198.7 122 78.7
Sabra16G0098600 Salix brachista HOM05D006449 ORTHO05D007995 4.2e-49 198.0 122 77.0
SEGI_04945 Sequoiadendron giganteum HOM05D006449 ORTHO05D007995 1.6e-48 196.1 116 76.7
THA.LOC104823475 Tarenaya hassleriana HOM05D006449 ORTHO05D007995 1.6e-48 196.1 117 76.9
CDE09G0874 Ceratophyllum demersum HOM05D006449 ORTHO05D007995 3.6e-48 194.9 119 74.8
Lsat_1_v5_gn_1_52340 Lactuca sativa HOM05D006449 ORTHO05D007995 6.1e-48 194.1 119 75.6
GSVIVG01033644001 Vitis vinifera HOM05D006449 ORTHO05D007995 2.3e-47 192.2 120 75.0
Os08g0564500 Oryza sativa ssp. japonica HOM05D006449 ORTHO05D007995 1.5e-46 189.5 124 71.8
unitig_749.g14285 Utricularia gibba HOM05D006449 ORTHO05D007995 2.0e-46 189.1 120 74.2
Thhalv10017435m.g Eutrema salsugineum HOM05D006449 ORTHO05D007995 7.5e-46 187.2 115 73.9
Zm00001eb038700 Zea mays HOM05D006449 ORTHO05D007995 7.5e-46 187.2 124 71.0
AT2G36930 Arabidopsis thaliana HOM05D006449 ORTHO05D007995 9.8e-46 186.8 116 74.1
BcaB01g03807 Brassica carinata HOM05D006449 ORTHO05D007995 1.3e-45 186.4 116 73.3
A05p08950 Brassica napus HOM05D006449 ORTHO05D007995 1.3e-45 186.4 116 73.3
C04p11060 Brassica napus HOM05D006449 ORTHO05D007995 1.3e-45 186.4 116 73.3
BolC4t22754H Brassica oleracea HOM05D006449 ORTHO05D007995 1.3e-45 186.4 116 73.3
BraA05t19857Z Brassica rapa HOM05D006449 ORTHO05D007995 1.3e-45 186.4 116 73.3
CARHR131400 Cardamine hirsuta HOM05D006449 ORTHO05D007995 1.7e-45 186.0 117 71.8
BcaB02g09320 Brassica carinata HOM05D006449 ORTHO05D007995 2.8e-45 185.3 116 72.4
BcaC02g11815 Brassica carinata HOM05D006449 ORTHO05D007995 2.8e-45 185.3 116 72.4
CSS0018897 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 3.7e-45 184.9 133 68.4
AL4G33170 Arabidopsis lyrata HOM05D006449 ORTHO05D007995 4.8e-45 184.5 116 72.4
A03p20330 Brassica napus HOM05D006449 ORTHO05D007995 1.4e-44 183.0 116 71.6
BraA03t11279Z Brassica rapa HOM05D006449 ORTHO05D007995 1.4e-44 183.0 116 71.6
Sp4g19220 Schrenkiella parvula HOM05D006449 ORTHO05D007995 1.8e-44 182.6 116 71.6
BcaC01g05620 Brassica carinata HOM05D006449 ORTHO05D007995 3.1e-44 181.8 116 70.7
C03p23890 Brassica napus HOM05D006449 ORTHO05D007995 3.1e-44 181.8 116 70.7
BolC3t14781H Brassica oleracea HOM05D006449 ORTHO05D007995 3.1e-44 181.8 116 70.7
Carub.0004s1878 Capsella rubella HOM05D006449 ORTHO05D007995 9.1e-44 180.3 116 71.6
Nitab4.5_0029554g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 7.2e-41 170.6 91 85.7
SGA_v2.0_scaffold40G15520 Striga asiatica HOM05D006449 ORTHO05D007995 1.6e-40 169.5 90 84.4
Rhsim03G0091200 Rhododendron simsii HOM05D006449 ORTHO05D007995 2.8e-40 168.7 90 83.3
Lalb_Chr02g0155801 Lupinus albus HOM05D006449 ORTHO05D007995 6.1e-40 167.5 87 83.9
Cfa017617 Carpinus fangiana HOM05D006449 ORTHO05D007995 8.0e-40 167.2 130 65.4
HanXRQChr01g0027751 Helianthus annuus HOM05D006449 ORTHO05D007995 8.0e-40 167.2 90 80.0
Sabra06G0098200 Salix brachista HOM05D006449 ORTHO05D007995 8.0e-40 167.2 91 83.5
SGA_v2.0_scaffold75G24848 Striga asiatica HOM05D006449 ORTHO05D007995 1.0e-39 166.8 90 83.3
MELO3C024474.2 Cucumis melo HOM05D006449 ORTHO05D007995 5.2e-39 164.5 87 85.1
Mapoly0185s0018 Marchantia polymorpha HOM05D006449 ORTHO05D007995 2.0e-38 162.5 119 63.0
QL07p043219 Quercus lobata HOM05D006449 ORTHO05D007995 2.0e-38 162.5 87 80.5
COL.COLO4_26955 Corchorus olitorius HOM05D006449 ORTHO05D007995 3.4e-38 161.8 99 74.7
Aa31LG5G22150 Aethionema arabicum HOM05D006449 ORTHO05D007995 5.7e-38 161.0 117 65.0
arahy.Tifrunner.gnm1.ann1.9GBJ25 Arachis hypogaea HOM05D006449 ORTHO05D007995 1.4e-36 156.4 86 82.6
arahy.Tifrunner.gnm1.ann1.D9FX9P Arachis hypogaea HOM05D006449 ORTHO05D007995 1.4e-36 156.4 86 82.6
Pp3c13_22060 Physcomitrium patens HOM05D006449 ORTHO05D007995 1.4e-36 156.4 115 62.6
Sc20g0005520 Simmondsia chinensis HOM05D006449 ORTHO05D007995 2.4e-36 155.6 86 77.9
CANSAT80G0535 Cannabis sativa HOM05D006449 ORTHO05D007995 4.1e-36 154.8 87 81.6
ATR0219G007 Amborella trichopoda HOM05D006449 ORTHO05D007995 1.0e-34 150.2 87 73.6
Migut.J00654 Erythranthe guttata HOM05D006449 ORTHO05D007995 2.3e-34 149.1 86 77.9
Cc06_g04250 Coffea canephora HOM05D006449 ORTHO05D007995 3.8e-34 148.3 76 84.2
MD12G1112600 Malus domestica HOM05D006449 ORTHO05D007995 1.5e-33 146.4 86 75.6
Potri.006G124100 Populus trichocarpa HOM05D006449 ORTHO05D007995 1.9e-33 146.0 76 85.5
PSO063G3287 Papaver somniferum HOM05D006449 ORTHO05D007995 2.5e-33 145.6 115 60.9
PSO339G4301 Papaver somniferum HOM05D006449 ORTHO05D007995 2.5e-33 145.6 115 60.9
Ciclev10013228m.g Citrus clementina HOM05D006449 ORTHO05D007995 7.3e-33 144.1 84 76.2
MD00G1155400 Malus domestica HOM05D006449 ORTHO05D007995 9.5e-33 143.7 86 74.4
Oeu005023.1 Olea europaea HOM05D006449 ORTHO05D007995 1.6e-32 142.9 101 69.3
HPP92_025806 Vanilla planifolia HOM05D006449 ORTHO05D007995 6.1e-32 141.0 89 74.2
Haze_20546 Corylus avellana HOM05D006449 ORTHO05D007995 1.0e-31 140.2 100 66.0
vmacro07293 Vaccinium macrocarpon HOM05D006449 ORTHO05D007995 5.2e-31 137.9 103 64.1
Manes.08G011000 Manihot esculenta HOM05D006449 ORTHO05D007995 1.1e-28 130.2 97 64.9
SMO144G0185 Selaginella moellendorffii HOM05D006449 ORTHO05D007995 1.5e-25 119.8 88 62.5
Prupe.7G129700 Prunus persica HOM05D006449 ORTHO05D007995 3.6e-24 115.2 65 76.9
TAR633G1413 Trochodendron aralioides HOM05D002509 ORTHO05D002758 3.0e-18 95.5 54 77.8
Lj3A986G82 Lonicera japonica HOM05D006449 ORTHO05D007995 1.4e-15 86.7 119 43.7
Cre17.g734628 Chlamydomonas reinhardtii HOM05D006449 ORTHO05D007995 1.8e-15 86.3 117 39.3
PRCOL_00003735 Prasinoderma coloniale HOM05D006449 ORTHO05D007995 8.9e-15 84.0 109 38.5
MCO09G543 Micromonas commoda HOM05D006449 ORTHO05D007995 6.4e-13 77.8 146 35.6
CBR_g8310 Chara braunii HOM05D006449 ORTHO05D007995 2.4e-12 75.9 115 38.3
MSTRG.19181 Avicennia marina HOM05D006449 ORTHO05D007995 5.6e-09 64.7 33 87.9
HanXRQChr16g0526221 Helianthus annuus HOM05D006449 ORTHO05D007995 1.2e-08 63.5 30 83.3
Thhalv10009663m.g Eutrema salsugineum HOM05D005081 ORTHO05D005506 1.8e-07 59.7 31 83.9


User provided reference genes

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