Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G900.26 Capsicum annuum HOM05D007148 ORTHO05D009047 1.4e-185 652.9 346 100.0
Sopen09g003080 Solanum pennellii HOM05D007148 ORTHO05D009047 5.5e-110 401.7 313 73.2
PGSC0003DMG401003864 Solanum tuberosum HOM05D007148 ORTHO05D009047 1.4e-108 397.1 318 71.7
Solyc09g008260.3 Solanum lycopersicum HOM05D007148 ORTHO05D009047 6.7e-108 394.8 313 71.9
Nitab4.5_0008624g0020 Nicotiana tabacum HOM05D007148 ORTHO05D009047 8.8e-100 367.9 321 67.3
Peaxi162Scf00847g00313 Petunia axillaris HOM05D007148 ORTHO05D009047 1.4e-76 290.8 391 50.6
Nitab4.5_0000578g0130 Nicotiana tabacum HOM05D007148 ORTHO05D009047 2.3e-71 273.5 288 60.4
HanXRQChr13g0400991 Helianthus annuus HOM05D007148 ORTHO05D009047 8.1e-45 185.3 317 40.1
GSVIVG01033649001 Vitis vinifera HOM05D007148 ORTHO05D009047 3.1e-44 183.3 343 42.0
Gohir.A01G213200 Gossypium hirsutum HOM05D007148 ORTHO05D009047 5.8e-43 179.1 372 38.7
Oeu053686.1 Olea europaea HOM05D007148 ORTHO05D009047 8.4e-42 175.3 329 39.2
Gorai.002G246600 Gossypium raimondii HOM05D007148 ORTHO05D009047 1.6e-40 171.0 374 36.9
Gohir.D01G204200 Gossypium hirsutum HOM05D007148 ORTHO05D009047 6.0e-40 169.1 377 37.4
Dinv35791 Davidia involucrata HOM05D007148 ORTHO05D009047 3.9e-39 166.4 334 38.6
Cc06_g04310 Coffea canephora HOM05D007148 ORTHO05D009047 8.7e-39 165.2 333 38.1
CiPaw.09G171600 Carya illinoinensis HOM05D007148 ORTHO05D009047 1.3e-37 161.4 446 32.7
Lsat_1_v5_gn_6_24961 Lactuca sativa HOM05D007148 ORTHO05D009047 1.1e-36 158.3 318 36.8
DCAR_014515 Daucus carota HOM05D007148 ORTHO05D009047 6.9e-36 155.6 316 38.0
TAR633G2546 Trochodendron aralioides HOM05D007148 ORTHO05D009047 6.9e-36 155.6 336 37.5
SalBow3G0477 Salvia bowleyana HOM05D007148 ORTHO05D009047 1.5e-35 154.5 314 38.2
Rhsim04G0144100 Rhododendron simsii HOM05D007148 ORTHO05D009047 7.6e-35 152.1 332 38.3
COL.COLO4_26948 Corchorus olitorius HOM05D007148 ORTHO05D009047 9.9e-35 151.8 390 34.1
Hund20337 Selenicereus undatus HOM05D007148 ORTHO05D009047 9.9e-35 151.8 371 35.3
Duzib093G0361 Durio zibethinus HOM05D007148 ORTHO05D009047 2.2e-34 150.6 377 34.2
Actinidia31326 Actinidia chinensis HOM05D007148 ORTHO05D009047 7.1e-33 145.6 268 40.3
ATR1126G054 Amborella trichopoda HOM05D007148 ORTHO05D009047 9.3e-33 145.2 338 35.5
Nn6g35277 Nelumbo nucifera HOM05D007148 ORTHO05D009047 2.7e-32 143.7 270 37.0
Prupe.7G128700 Prunus persica HOM05D007148 ORTHO05D009047 2.7e-32 143.7 436 30.7
unitig_8.g4717 Utricularia gibba HOM05D006951 ORTHO05D008594 2.7e-32 143.7 319 35.4
Ca_11512_v3 Cicer arietinum L. HOM05D000261 ORTHO05D009047 2.3e-31 140.6 389 31.6
MSTRG.10326 Avicennia marina HOM05D007148 ORTHO05D009047 1.9e-30 137.5 300 38.3
MBI19_g45279_MAGBIO Magnolia biondii HOM05D007148 ORTHO05D009047 4.3e-30 136.3 350 34.9
arahy.Tifrunner.gnm1.ann1.J3RTVJ Arachis hypogaea HOM05D007148 ORTHO05D009047 5.6e-30 136.0 437 30.7
ECA233G5868 Erigeron canadensis HOM05D007148 ORTHO05D009047 1.3e-29 134.8 276 36.6
Thecc.05G068300 Theobroma cacao HOM05D007148 ORTHO05D009047 1.4e-28 131.3 320 35.0
Duzib128G0502 Durio zibethinus HOM05D007148 ORTHO05D009047 2.6e-27 127.1 340 33.8
FAN05G4699 Fragaria x ananassa HOM05D007148 ORTHO05D009047 5.8e-27 125.9 452 29.6
FvH4_6g16490 Fragaria vesca HOM05D007148 ORTHO05D009047 1.0e-26 125.2 452 28.8
FAN05G5619 Fragaria x ananassa HOM05D007148 ORTHO05D009047 1.0e-26 125.2 452 29.4
Phvul.007G147800 Phaseolus vulgaris HOM05D007148 ORTHO05D009047 2.2e-26 124.0 485 28.2
AUR62026914 Chenopodium quinoa HOM05D007148 ORTHO05D009047 2.9e-26 123.6 324 34.0
Rhsim04G0143400 Rhododendron simsii HOM05D007148 ORTHO05D009047 2.9e-26 123.6 171 48.0
FAN14G3336 Fragaria x ananassa HOM05D007148 ORTHO05D009047 1.4e-25 121.3 452 28.1
arahy.Tifrunner.gnm1.ann1.IRYX6E Arachis hypogaea HOM05D007148 ORTHO05D009047 1.9e-25 120.9 481 28.3
FAN09G1323 Fragaria x ananassa HOM05D007148 ORTHO05D009047 6.0e-24 115.9 452 27.9
Ah.08g211560 Amaranthus hybridus HOM05D007148 ORTHO05D009047 1.3e-23 114.8 328 33.2
Manes.08G011400 Manihot esculenta HOM05D007148 ORTHO05D009047 3.9e-23 113.2 187 40.1
CANSAT80G2677 Cannabis sativa HOM05D007148 ORTHO05D009047 5.1e-23 112.8 475 27.8
CsaV3_6G039960 Cucumis sativus L. HOM05D007148 ORTHO05D009047 6.7e-23 112.5 515 28.7
FAN02G0401 Fragaria x ananassa HOM05D007148 ORTHO05D009047 8.7e-23 112.1 491 29.1
CDE09G0108 Ceratophyllum demersum HOM05D007534 ORTHO05D009540 2.5e-22 110.5 318 31.1
Ciclev10012080m.g Citrus clementina HOM05D007148 ORTHO05D009047 5.7e-22 109.4 313 31.9
Glyma.10G054600 Glycine max HOM05D007148 ORTHO05D009047 7.4e-22 109.0 464 27.6
Sed0015836 Sechium edule HOM05D007148 ORTHO05D009047 1.6e-21 107.8 212 38.2
Sabra06G0097500 Salix brachista HOM05D001037 ORTHO05D000888 6.3e-21 105.9 477 27.3
PGR004G2178 Punica granatum HOM05D007148 ORTHO05D009047 1.8e-20 104.4 437 29.1
CSS0013124 Camellia sinensis var. sinensis HOM05D007148 ORTHO05D009047 2.4e-20 104.0 246 37.0
RcHm_v2.0_Chr3g0470391 Rosa chinensis HOM05D007148 ORTHO05D009047 3.1e-20 103.6 486 25.7
Lalb_Chr02g0155781 Lupinus albus HOM05D007148 ORTHO05D009047 4.1e-20 103.2 430 26.0
MD12G1110100 Malus domestica HOM05D007148 ORTHO05D009047 6.9e-20 102.4 484 27.3
PSO801G0196 Papaver somniferum HOM05D007148 ORTHO05D009047 6.9e-20 102.4 436 26.1
Migut.J00650 Erythranthe guttata HOM05D007148 ORTHO05D009047 3.4e-19 100.1 258 34.5
Hma1.2p1_2076F.1_g313310 Hydrangea macrophylla HOM05D007148 ORTHO05D009047 1.7e-18 97.8 172 40.1
Aqoxy2G01740 Aquilegia oxysepala HOM05D007148 ORTHO05D009047 2.2e-18 97.4 313 30.0
Haze_20525 Corylus avellana HOM05D007534 ORTHO05D009540 2.2e-18 97.4 310 31.0
VMungo0720G1794 Vigna mungo HOM05D007148 ORTHO05D009047 2.2e-18 97.4 492 26.2
MELO3C024473.2 Cucumis melo HOM05D007148 ORTHO05D009047 5.0e-18 96.3 495 26.1
QL07p043079 Quercus lobata HOM05D007148 ORTHO05D009047 5.0e-18 96.3 480 25.4
MD04G1092300 Malus domestica HOM05D007148 ORTHO05D009047 1.9e-17 94.4 472 25.4
Sc20g0005580 Simmondsia chinensis HOM05D007148 ORTHO05D009047 1.9e-17 94.4 305 33.1
BcaC06g32057 Brassica carinata HOM05D002509 ORTHO05D002758 4.2e-17 93.2 202 34.7
PSO339G4391 Papaver somniferum HOM05D007148 ORTHO05D009047 4.2e-17 93.2 442 25.3
Eucgr.A01669 Eucalyptus grandis HOM05D007148 ORTHO05D009047 9.4e-17 92.0 378 27.5
TWI74G0491 Tripterygium wilfordii HOM05D007148 ORTHO05D009047 9.4e-17 92.0 307 29.3
Potri.006G123300 Populus trichocarpa HOM05D007148 ORTHO05D009047 1.6e-16 91.3 479 26.5
Atru.chr8.1790 Acer truncatum HOM05D007148 ORTHO05D009047 6.1e-16 89.4 175 36.6
Thhalv10013433m.g Eutrema salsugineum HOM05D007148 ORTHO05D009047 6.1e-16 89.4 278 29.5
Carub.0006s0223 Capsella rubella HOM05D007148 ORTHO05D009047 7.9e-16 89.0 213 35.7
AL6G12750 Arabidopsis lyrata HOM05D007148 ORTHO05D009047 1.8e-15 87.8 253 32.4
AUR62042066 Chenopodium quinoa HOM05D007148 ORTHO05D009047 1.8e-15 87.8 393 27.7
THA.LOC104816351 Tarenaya hassleriana HOM05D007148 ORTHO05D009047 1.8e-15 87.8 65 61.5
Psat6g073400 Pisum sativum HOM05D007148 ORTHO05D009047 6.7e-15 85.9 386 25.9
TPR.G11276 Trifolium pratense HOM05D007148 ORTHO05D009047 6.7e-15 85.9 450 27.8
CANSAT80G0842 Cannabis sativa HOM05D007148 ORTHO05D009047 1.5e-14 84.7 63 63.5
BraA10t45294Z Brassica rapa HOM05D002509 ORTHO05D002758 2.5e-14 84.0 125 38.4
ClCG04G009380 Citrullus lanatus HOM05D007148 ORTHO05D009047 3.3e-14 83.6 357 27.2
Sp6g39320 Schrenkiella parvula HOM05D007148 ORTHO05D009047 5.7e-14 82.8 244 32.8
Lj5g0011331 Lotus japonicus HOM05D007148 ORTHO05D009047 1.3e-13 81.6 269 30.1
A10p32590 Brassica napus HOM05D002509 ORTHO05D002758 2.2e-13 80.9 125 37.6
CARHR209920 Cardamine hirsuta HOM05D007148 ORTHO05D009047 3.7e-13 80.1 191 32.5
C09p73390 Brassica napus HOM05D002509 ORTHO05D002758 1.1e-12 78.6 199 30.7
Medtr1g063080 Medicago truncatula HOM05D007148 ORTHO05D009047 1.1e-12 78.6 471 25.9
THA.LOC104826916 Tarenaya hassleriana HOM05D007148 ORTHO05D009047 1.1e-12 78.6 210 33.3
Aa31LG1G21730 Aethionema arabicum HOM05D007148 ORTHO05D009047 2.4e-12 77.4 214 32.7
AT5G03420 Arabidopsis thaliana HOM05D007148 ORTHO05D009047 2.4e-12 77.4 171 35.7
BcaC06g32060 Brassica carinata HOM05D007148 ORTHO05D009047 2.4e-12 77.4 208 32.2
BolC9t60075H Brassica oleracea HOM05D002509 ORTHO05D002758 4.1e-12 76.6 210 32.9
vmacro08783 Vaccinium macrocarpon HOM05D007148 ORTHO05D009047 7.7e-11 72.4 273 29.3
Atru.chr8.1789 Acer truncatum HOM05D007148 ORTHO05D009047 1.3e-10 71.6 216 29.2
Glyma.13G141800 Glycine max HOM05D007148 ORTHO05D009047 2.9e-10 70.5 311 28.0
CSS0045155 Camellia sinensis var. sinensis HOM05D007148 ORTHO05D009047 6.5e-10 69.3 40 80.0
SEGI_24698 Sequoiadendron giganteum HOM05D007148 ORTHO05D009047 1.4e-09 68.2 59 52.5
FvH4_3g24282 Fragaria vesca HOM05D007148 ORTHO05D009047 3.0e-07 60.5 59 57.6
Mapoly0046s0027 Marchantia polymorpha HOM05D007148 ORTHO05D009047 3.9e-07 60.1 401 23.7


User provided reference genes

Program Settings