Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G9.28 Capsicum annuum HOM05D000003 ORTHO05D000004 6.0e-115 417.5 212 100.0
CAN.G484.27 Capsicum annuum HOM05D003414 ORTHO05D003913 2.6e-38 162.9 129 65.9
Sopen11g019150 Solanum pennellii HOM05D000002 ORTHO05D000001 2.8e-24 116.3 188 34.6
CAN.G1315.6 Capsicum annuum HOM05D000003 ORTHO05D000004 9.4e-20 101.3 113 47.8
Peaxi162Scf00262g00132 Petunia axillaris HOM05D000003 ORTHO05D000007 7.5e-17 91.7 87 46.0
Peaxi162Scf00106g01210 Petunia axillaris HOM05D000003 ORTHO05D000004 1.7e-16 90.5 86 48.8
PGSC0003DMG400031032 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.4e-15 86.7 120 43.3
Nitab4.5_0003206g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000004 3.1e-15 86.3 111 38.7
Sopen00g009650 Solanum pennellii HOM05D000003 ORTHO05D000004 4.1e-15 85.9 117 35.9
Sopen00g006710 Solanum pennellii HOM05D000003 ORTHO05D000004 5.4e-15 85.5 111 37.8
Sopen00g008350 Solanum pennellii HOM05D000003 ORTHO05D000004 7.0e-15 85.1 117 35.9
Sopen12g011790 Solanum pennellii HOM05D000003 ORTHO05D000004 1.2e-14 84.3 117 33.3
CAN.G1535.3 Capsicum annuum HOM05D000003 ORTHO05D000004 2.0e-14 83.6 100 42.0
PGSC0003DMG400004512 Solanum tuberosum HOM05D000003 ORTHO05D000006 2.0e-14 83.6 107 41.1
Sopen01g024500 Solanum pennellii HOM05D000003 ORTHO05D000004 2.7e-14 83.2 113 37.2
Sopen00g007850 Solanum pennellii HOM05D000003 ORTHO05D000004 3.5e-14 82.8 198 27.3
Sopen08g007800 Solanum pennellii HOM05D000003 ORTHO05D000004 3.5e-14 82.8 117 35.0
CAN.G107.29 Capsicum annuum HOM05D000003 ORTHO05D000006 4.5e-14 82.4 154 30.5
Sopen00g008230 Solanum pennellii HOM05D000003 ORTHO05D000004 4.5e-14 82.4 117 35.0
Sopen00g005010 Solanum pennellii HOM05D000003 ORTHO05D000004 5.9e-14 82.0 113 37.2
Sopen00g009450 Solanum pennellii HOM05D000003 ORTHO05D000004 5.9e-14 82.0 117 35.9
Sopen00g013580 Solanum pennellii HOM05D000003 ORTHO05D000004 5.9e-14 82.0 192 30.2
Sopen02g001330 Solanum pennellii HOM05D000003 ORTHO05D000004 7.7e-14 81.6 113 36.3
Sopen00g008000 Solanum pennellii HOM05D000003 ORTHO05D000004 1.0e-13 81.3 117 35.9
Sopen00g009000 Solanum pennellii HOM05D000003 ORTHO05D000004 1.0e-13 81.3 108 37.0
Sopen12g013620 Solanum pennellii HOM05D000003 ORTHO05D000004 1.0e-13 81.3 198 27.3
Peaxi162Scf00348g00021 Petunia axillaris HOM05D000003 ORTHO05D000004 1.3e-13 80.9 90 44.4
Sopen05g024150 Solanum pennellii HOM05D000003 ORTHO05D000004 1.3e-13 80.9 195 27.2
Sopen00g003630 Solanum pennellii HOM05D000003 ORTHO05D000004 1.7e-13 80.5 113 37.2
Sopen00g004600 Solanum pennellii HOM05D000003 ORTHO05D000004 1.7e-13 80.5 117 35.9
Sopen07g014510 Solanum pennellii HOM05D000003 ORTHO05D000004 1.7e-13 80.5 117 35.9
PGSC0003DMG400007664 Solanum tuberosum HOM05D000003 ORTHO05D000004 1.7e-13 80.5 100 41.0
Psat6g023800 Pisum sativum HOM05D000003 ORTHO05D000007 2.3e-13 80.1 112 34.8
Sopen00g005860 Solanum pennellii HOM05D000003 ORTHO05D000004 2.3e-13 80.1 91 42.9
Sopen12g026830 Solanum pennellii HOM05D000003 ORTHO05D000007 2.9e-13 79.7 109 35.8
Sopen00g005320 Solanum pennellii HOM05D000003 ORTHO05D000004 5.0e-13 79.0 117 33.3
Sopen00g006450 Solanum pennellii HOM05D000003 ORTHO05D000004 5.0e-13 79.0 198 29.8
Sopen00g008600 Solanum pennellii HOM05D000003 ORTHO05D000004 5.0e-13 79.0 117 33.3
Sopen07g018030 Solanum pennellii HOM05D000003 ORTHO05D000004 5.0e-13 79.0 194 26.8
Sopen00g005620 Solanum pennellii HOM05D000003 ORTHO05D000004 6.6e-13 78.6 117 32.5
PGSC0003DMG400023294 Solanum tuberosum HOM05D000003 ORTHO05D000004 6.6e-13 78.6 78 50.0
Sopen00g009820 Solanum pennellii HOM05D000003 ORTHO05D000004 8.6e-13 78.2 117 34.2
CAN.G26.33 Capsicum annuum HOM05D000003 ORTHO05D000004 1.5e-12 77.4 123 34.1
Sopen00g007050 Solanum pennellii HOM05D000003 ORTHO05D000004 1.9e-12 77.0 117 32.5
Sopen04g018170 Solanum pennellii HOM05D000003 ORTHO05D000004 2.5e-12 76.6 198 26.8
Sopen08g014400 Solanum pennellii HOM05D000003 ORTHO05D000004 2.5e-12 76.6 198 27.3
Psat4g032440 Pisum sativum HOM05D000003 ORTHO05D000004 3.3e-12 76.3 99 37.4
Sopen00g012810 Solanum pennellii HOM05D000003 ORTHO05D000004 3.3e-12 76.3 117 33.3
Potri.003G047001 Populus trichocarpa HOM05D000003 ORTHO05D000006 4.3e-12 75.9 136 35.3
Potri.005G151275 Populus trichocarpa HOM05D000003 ORTHO05D000006 5.6e-12 75.5 136 34.6
Sopen00g008520 Solanum pennellii HOM05D000003 ORTHO05D000004 5.6e-12 75.5 144 31.2
Sopen00g010080 Solanum pennellii HOM05D000003 ORTHO05D000004 5.6e-12 75.5 117 32.5
Sopen05g017140 Solanum pennellii HOM05D000003 ORTHO05D000004 5.6e-12 75.5 117 31.6
Potri.012G063901 Populus trichocarpa HOM05D000003 ORTHO05D000006 9.5e-12 74.7 136 35.3
CAN.G1138.3 Capsicum annuum HOM05D000004 ORTHO05D000002 1.6e-11 73.9 103 36.9
Psat5g282240 Pisum sativum HOM05D000003 ORTHO05D000004 2.1e-11 73.6 106 36.8
Sopen07g012090 Solanum pennellii HOM05D000003 ORTHO05D009932 2.1e-11 73.6 113 31.9
CAN.G111.43 Capsicum annuum HOM05D000004 ORTHO05D000006 2.8e-11 73.2 76 44.7
TPR.G13276 Trifolium pratense HOM05D000003 ORTHO05D000004 2.8e-11 73.2 112 32.1
Psat2g089560 Pisum sativum HOM05D000003 ORTHO05D000004 3.6e-11 72.8 106 36.8
Psat4g023640 Pisum sativum HOM05D000003 ORTHO05D000004 4.7e-11 72.4 95 38.9
Psat7g081280 Pisum sativum HOM05D000003 ORTHO05D000004 4.7e-11 72.4 116 35.3
Psat3g081720 Pisum sativum HOM05D000003 ORTHO05D000004 6.1e-11 72.0 106 34.9
Psat4g187720 Pisum sativum HOM05D000003 ORTHO05D000006 6.1e-11 72.0 106 35.8
CAN.G9.9 Capsicum annuum HOM05D000003 ORTHO05D000004 1.0e-10 71.2 77 45.5
Psat1g007240 Pisum sativum HOM05D000003 ORTHO05D000004 1.0e-10 71.2 127 34.6
Sopen00g010250 Solanum pennellii HOM05D000003 ORTHO05D000004 1.0e-10 71.2 113 31.0
CAN.G1025.3 Capsicum annuum HOM05D000003 ORTHO05D000004 1.4e-10 70.9 95 40.0
TPR.G25959 Trifolium pratense HOM05D000003 ORTHO05D000004 1.4e-10 70.9 85 37.6
TPR.G35752 Trifolium pratense HOM05D000003 ORTHO05D010993 1.8e-10 70.5 182 27.5
Psat6g107440 Pisum sativum HOM05D000003 ORTHO05D000004 5.2e-10 68.9 83 41.0
TPR.G8630 Trifolium pratense HOM05D000003 ORTHO05D000004 6.8e-10 68.6 182 27.5
Psat0s1287g0080 Pisum sativum HOM05D000004 ORTHO05D000002 8.9e-10 68.2 105 30.5
Psat5g231720 Pisum sativum HOM05D000003 ORTHO05D000004 8.9e-10 68.2 157 28.0
Peaxi162Scf00043g00113 Petunia axillaris HOM05D000003 ORTHO05D036905 1.5e-09 67.4 106 32.1
Sopen06g013940 Solanum pennellii HOM05D000003 ORTHO05D000004 2.0e-09 67.0 79 40.5
Ah.10g026680 Amaranthus hybridus HOM05D000003 ORTHO05D000004 2.6e-09 66.6 111 33.3
CANSAT35G0636 Cannabis sativa HOM05D000003 ORTHO05D000004 7.5e-09 65.1 118 28.8
Psat1g220680 Pisum sativum HOM05D000003 ORTHO05D000004 7.5e-09 65.1 111 33.3
Peaxi162Scf00053g02315 Petunia axillaris HOM05D000003 ORTHO05D000006 9.8e-09 64.7 67 47.8
Sopen00g007130 Solanum pennellii HOM05D000003 ORTHO05D000004 9.8e-09 64.7 72 44.4
CAN.G289.12 Capsicum annuum HOM05D000003 ORTHO05D000004 1.3e-08 64.3 91 40.7
Sopen09g021380 Solanum pennellii HOM05D000003 ORTHO05D000004 1.7e-08 63.9 95 36.8
CANSAT01G2946 Cannabis sativa HOM05D000003 ORTHO05D000004 2.2e-08 63.5 152 25.7
Oeu049817.4 Olea europaea HOM05D000003 ORTHO05D000004 2.2e-08 63.5 113 31.0
Psat2g163160 Pisum sativum HOM05D000003 ORTHO05D000004 2.9e-08 63.2 107 30.8
Sopen00g008290 Solanum pennellii HOM05D000003 ORTHO05D000004 2.9e-08 63.2 79 39.2
Sopen00g011320 Solanum pennellii HOM05D000003 ORTHO05D000004 2.9e-08 63.2 102 33.3
Sopen12g026800 Solanum pennellii HOM05D000003 ORTHO05D000004 2.9e-08 63.2 72 43.1
TPR.G27375 Trifolium pratense HOM05D000003 ORTHO05D000004 2.9e-08 63.2 189 25.9
EL10Ac1g02038 Beta vulgaris HOM05D000003 ORTHO05D000006 3.7e-08 62.8 193 26.9
Sopen00g010000 Solanum pennellii HOM05D000003 ORTHO05D000004 3.7e-08 62.8 91 37.4
Sopen09g011430 Solanum pennellii HOM05D000003 ORTHO05D000004 3.7e-08 62.8 73 39.7
Psat4g100040 Pisum sativum HOM05D000003 ORTHO05D000004 4.9e-08 62.4 111 33.3
Sopen03g011230 Solanum pennellii HOM05D000003 ORTHO05D000004 4.9e-08 62.4 66 43.9
Sopen05g016440 Solanum pennellii HOM05D000003 ORTHO05D000004 8.3e-08 61.6 86 37.2
Sopen12g013630 Solanum pennellii HOM05D000003 ORTHO05D000004 8.3e-08 61.6 72 41.7
CANSAT21G0277 Cannabis sativa HOM05D000003 ORTHO05D000004 1.4e-07 60.8 118 25.4
ECA236G4719 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.4e-07 60.8 108 35.2
Psat7g250800 Pisum sativum HOM05D000003 ORTHO05D000004 1.4e-07 60.8 102 31.4
Sopen00g009230 Solanum pennellii HOM05D000003 ORTHO05D000004 1.4e-07 60.8 72 40.3
Sopen07g017470 Solanum pennellii HOM05D000003 ORTHO05D000004 1.4e-07 60.8 79 36.7
HanXRQChr03g0079511 Helianthus annuus HOM05D000003 ORTHO05D000004 1.8e-07 60.5 130 31.5
Sopen00g006870 Solanum pennellii HOM05D000003 ORTHO05D000004 2.4e-07 60.1 72 40.3
Aqoxy4G02040 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.2e-07 59.7 111 27.9
Oeu027589.1 Olea europaea HOM05D000003 ORTHO05D000007 3.2e-07 59.7 110 30.0
Psat3g039800 Pisum sativum HOM05D000003 ORTHO05D000004 3.2e-07 59.7 159 24.5
Sopen12g018990 Solanum pennellii HOM05D000004 ORTHO05D000004 3.2e-07 59.7 72 40.3
Ah.03g142580 Amaranthus hybridus HOM05D000003 ORTHO05D000004 4.1e-07 59.3 107 29.9
Sopen05g020920 Solanum pennellii HOM05D000003 ORTHO05D000004 4.1e-07 59.3 90 33.3
CAN.G929.33 Capsicum annuum HOM05D004392 ORTHO05D004846 5.4e-07 58.9 165 23.6
Sopen07g017840 Solanum pennellii HOM05D000003 ORTHO05D000004 5.4e-07 58.9 68 38.2
HanXRQChr13g0389391 Helianthus annuus HOM05D000003 ORTHO05D000004 1.2e-06 57.8 86 31.4
Psat2g167600 Pisum sativum HOM05D000003 ORTHO05D000006 1.2e-06 57.8 87 34.5
Sopen00g009950 Solanum pennellii HOM05D000003 ORTHO05D000004 1.2e-06 57.8 68 39.7
TPR.G32004 Trifolium pratense HOM05D000003 ORTHO05D000004 1.6e-06 57.4 114 34.2
HanXRQChr17g0558651 Helianthus annuus HOM05D000003 ORTHO05D000004 2.7e-06 56.6 86 39.5
Psat5g156040 Pisum sativum HOM05D000003 ORTHO05D000004 3.5e-06 56.2 107 29.9
Sopen00g008780 Solanum pennellii HOM05D000003 ORTHO05D000004 3.5e-06 56.2 65 43.1
TPR.G11139 Trifolium pratense HOM05D000003 ORTHO05D000007 3.5e-06 56.2 111 29.7
Oeu032278.1 Olea europaea HOM05D000003 ORTHO05D000006 4.6e-06 55.8 113 26.5
Sopen00g004290 Solanum pennellii HOM05D000003 ORTHO05D000004 4.6e-06 55.8 90 31.1
Sopen00g009800 Solanum pennellii HOM05D000003 ORTHO05D000004 4.6e-06 55.8 64 42.2
SHI33828 Sapria himalayana HOM05D000003 ORTHO05D000004 5.9e-06 55.5 102 32.4
SHI34677 Sapria himalayana HOM05D000003 ORTHO05D000004 5.9e-06 55.5 102 31.4
SHI51710 Sapria himalayana HOM05D000003 ORTHO05D000004 5.9e-06 55.5 111 30.6
Psat4g036000 Pisum sativum HOM05D000003 ORTHO05D000004 7.8e-06 55.1 73 35.6


User provided reference genes

Program Settings