Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G897.9 Capsicum annuum HOM05D007594 ORTHO05D009607 0.0e+00 1917.5 963 100.0
Solyc07g048100.3 Solanum lycopersicum HOM05D007594 ORTHO05D009607 0.0e+00 1548.9 963 83.4
Sopen07g024530 Solanum pennellii HOM05D007594 ORTHO05D009607 0.0e+00 1496.1 919 84.1
Nitab4.5_0004358g0020 Nicotiana tabacum HOM05D007594 ORTHO05D009607 0.0e+00 1431.0 959 77.6
Nitab4.5_0004215g0020 Nicotiana tabacum HOM05D007594 ORTHO05D009607 0.0e+00 1430.2 961 77.6
Peaxi162Scf02035g00032 Petunia axillaris HOM05D007594 ORTHO05D009607 0.0e+00 1352.4 988 71.5
PGSC0003DMG400006140 Solanum tuberosum HOM05D007594 ORTHO05D009607 7.3e-269 931.0 548 86.9
Dinv03295 Davidia involucrata HOM05D007594 ORTHO05D009607 1.0e-177 628.2 1038 40.8
Actinidia06215 Actinidia chinensis HOM05D007594 ORTHO05D009607 3.2e-155 553.5 1047 36.7
Cc00_g06100 Coffea canephora HOM05D007594 ORTHO05D009607 2.3e-145 520.8 961 38.0
Hma1.2p1_1342F.1_g276950 Hydrangea macrophylla HOM05D007594 ORTHO05D009607 5.1e-145 519.6 1036 36.9
TAR633G1990 Trochodendron aralioides HOM05D007594 ORTHO05D009607 1.1e-142 511.9 1079 34.8
Thecc.10G140800 Theobroma cacao HOM05D007594 ORTHO05D009607 3.5e-138 496.9 1031 37.2
SGA_v2.0_scaffold124G33645 Striga asiatica HOM05D007594 ORTHO05D009607 2.1e-135 487.6 1009 36.7
MD00G1152500 Malus domestica HOM05D007594 ORTHO05D009607 7.6e-133 479.2 1053 35.9
DCAR_006600 Daucus carota HOM05D007594 ORTHO05D009607 9.9e-133 478.8 1026 34.0
vmacro13773 Vaccinium macrocarpon HOM05D007594 ORTHO05D009607 3.5e-130 470.3 992 35.4
Duzib128G1040 Durio zibethinus HOM05D007594 ORTHO05D009607 2.3e-129 467.6 1034 34.6
SalBow5G4015 Salvia bowleyana HOM05D007594 ORTHO05D009607 1.9e-123 448.0 1035 34.5
Prupe.2G044000 Prunus persica HOM05D007594 ORTHO05D009607 2.4e-123 447.6 1014 35.9
Lj3g0014217 Lotus japonicus HOM05D007594 ORTHO05D009607 4.6e-122 443.4 1057 34.5
Potri.003G193100 Populus trichocarpa HOM05D007594 ORTHO05D009607 6.6e-121 439.5 1071 33.5
Haze_02988 Corylus avellana HOM05D007594 ORTHO05D009607 4.8e-119 433.3 969 35.7
RcHm_v2.0_Chr1g0327541 Rosa chinensis HOM05D007594 ORTHO05D009607 4.5e-117 426.8 1014 35.1
Glyma.11G170937 Glycine max HOM05D007594 ORTHO05D009607 1.1e-115 422.2 1044 33.0
Rhsim07G0071100 Rhododendron simsii HOM05D007594 ORTHO05D009607 1.9e-115 421.4 1045 33.0
MBI13_g07373_MAGBIO Magnolia biondii HOM05D007594 ORTHO05D009607 1.5e-112 411.8 1087 32.8
Manes.04G156000 Manihot esculenta HOM05D007594 ORTHO05D009607 1.9e-112 411.4 1083 33.1
Gorai.011G220800 Gossypium raimondii HOM05D007594 ORTHO05D009607 1.3e-111 408.7 921 35.5
FvH4_7g03921 Fragaria vesca HOM05D007594 ORTHO05D009607 5.3e-110 403.3 1046 33.2
CANSAT56G2828 Cannabis sativa HOM05D007594 ORTHO05D009607 9.0e-110 402.5 1003 33.5
arahy.Tifrunner.gnm1.ann1.HR2C9L Arachis hypogaea HOM05D007594 ORTHO05D009607 3.4e-109 400.6 1039 32.7
GSVIVG01036598001 Vitis vinifera HOM05D007594 ORTHO05D009607 7.6e-109 399.4 854 35.9
arahy.Tifrunner.gnm1.ann1.IJ2ITM Arachis hypogaea HOM05D007594 ORTHO05D009607 1.7e-108 398.3 1044 33.0
CiPaw.13G016300 Carya illinoinensis HOM05D007594 ORTHO05D009607 1.7e-108 398.3 1003 35.2
FAN06G1277 Fragaria x ananassa HOM05D007594 ORTHO05D009607 6.5e-108 396.4 1046 33.1
Nn7g36922 Nelumbo nucifera HOM05D007594 ORTHO05D009607 3.2e-107 394.0 1014 32.7
Gohir.D10G197300 Gossypium hirsutum HOM05D007594 ORTHO05D009607 4.2e-107 393.7 918 35.1
Phvul.005G018200 Phaseolus vulgaris HOM05D007594 ORTHO05D009607 4.2e-107 393.7 1042 32.3
VMungo1080G0650 Vigna mungo HOM05D007594 ORTHO05D009607 1.2e-106 392.1 1050 32.0
Aqoxy1G00415 Aquilegia oxysepala HOM05D007594 ORTHO05D009607 1.8e-105 388.3 1074 31.0
TWI63G1387 Tripterygium wilfordii HOM05D007594 ORTHO05D009607 1.9e-104 384.8 971 34.0
FAN03G3082 Fragaria x ananassa HOM05D000688 ORTHO05D003888 2.5e-104 384.4 1049 32.7
Hma1.2p1_1730F.1_g299670 Hydrangea macrophylla HOM05D007594 ORTHO05D009607 3.3e-104 384.0 950 33.8
Gohir.A10G189500 Gossypium hirsutum HOM05D007594 ORTHO05D009607 7.4e-104 382.9 895 35.4
EL10Ac3g05954 Beta vulgaris HOM05D007594 ORTHO05D009607 1.2e-101 375.6 1064 31.4
ECA246G0181 Erigeron canadensis HOM05D007594 ORTHO05D009607 2.6e-101 374.4 1028 33.9
CsaV3_5G029660 Cucumis sativus L. HOM05D007594 ORTHO05D009607 4.5e-101 373.6 1051 30.9
ClCG11G013140 Citrullus lanatus HOM05D007594 ORTHO05D009607 2.9e-100 370.9 997 31.7
Psat5g215360 Pisum sativum HOM05D007594 ORTHO05D009607 1.4e-99 368.6 1213 29.2
AUR62023865 Chenopodium quinoa HOM05D007594 ORTHO05D009607 9.3e-99 365.9 1082 31.1
Medtr3g013490 Medicago truncatula HOM05D007594 ORTHO05D009607 6.1e-98 363.2 1063 30.0
Ciclev10003355m.g Citrus clementina HOM05D007594 ORTHO05D009607 6.7e-97 359.8 885 33.0
Atru.chr12.1243 Acer truncatum HOM05D007594 ORTHO05D009607 5.9e-93 346.7 951 31.8
HanXRQChr05g0146261 Helianthus annuus HOM05D007594 ORTHO05D009607 1.3e-92 345.5 927 33.2
Eucgr.G03206 Eucalyptus grandis HOM05D007594 ORTHO05D009607 1.7e-92 345.1 950 31.3
Sed0005696 Sechium edule HOM05D007594 ORTHO05D009607 1.4e-91 342.0 980 31.4
FAN01G0543 Fragaria x ananassa HOM05D007594 ORTHO05D009607 5.1e-89 333.6 1028 31.3
ATR0307G127 Amborella trichopoda HOM05D007594 ORTHO05D009607 1.2e-82 312.4 1176 28.8
Lsat_1_v5_gn_1_118241 Lactuca sativa HOM05D007594 ORTHO05D009607 1.4e-81 308.9 986 30.7
AUR62002319 Chenopodium quinoa HOM05D007594 ORTHO05D009607 1.8e-81 308.5 1044 29.8
PSO339G5236 Papaver somniferum HOM05D007594 ORTHO05D009607 9.1e-78 296.2 860 30.5
Sc11g0006300 Simmondsia chinensis HOM05D007594 ORTHO05D009607 8.8e-73 279.6 582 33.0
unitig_22.g5331 Utricularia gibba HOM05D007594 ORTHO05D009607 3.8e-68 264.2 801 30.2
PSO384G4678 Papaver somniferum HOM05D007594 ORTHO05D009607 6.5e-68 263.5 820 29.8
Ca_14092_v3 Cicer arietinum L. HOM05D007594 ORTHO05D009607 2.2e-63 248.4 896 28.7
Migut.B01185 Erythranthe guttata HOM05D007594 ORTHO05D009607 3.7e-63 247.7 293 45.1
TPR.G20651 Trifolium pratense HOM05D007594 ORTHO05D009607 7.0e-62 243.4 376 38.6
THA.LOC104826746 Tarenaya hassleriana HOM05D007594 ORTHO05D009607 2.7e-61 241.5 820 30.1
Lj9P657T24 Lonicera japonica HOM05D007594 ORTHO05D009607 1.3e-60 239.2 320 43.1
Hund03165 Selenicereus undatus HOM05D007594 ORTHO05D009607 1.5e-59 235.7 932 27.9
Os03g0811200 Oryza sativa ssp. japonica HOM05D007594 ORTHO05D009607 1.8e-57 228.8 993 26.9
Hund03166 Selenicereus undatus HOM05D007594 ORTHO05D009607 1.5e-56 225.7 933 27.0
Zm00001eb062110 Zea mays HOM05D007594 ORTHO05D009607 9.2e-54 216.5 870 27.8
Lalb_Chr24g0402831 Lupinus albus HOM05D007594 ORTHO05D009607 4.0e-49 201.1 886 28.3
TPR.G1438 Trifolium pratense HOM05D007594 ORTHO05D009607 4.4e-48 197.6 953 26.5
Nn7g38492 Nelumbo nucifera HOM05D007594 ORTHO05D009607 9.8e-48 196.4 665 29.9
Aqoxy1G00417 Aquilegia oxysepala HOM05D007594 ORTHO05D009607 6.2e-42 177.2 527 31.7
MELO3C011810.2 Cucumis melo HOM05D007594 ORTHO05D009607 2.6e-40 171.8 838 27.0
Nn032s41616 Nelumbo nucifera HOM05D007594 ORTHO05D009607 2.2e-39 168.7 181 47.5
Ca_14091_v3 Cicer arietinum L. HOM05D007594 ORTHO05D009607 7.8e-37 160.2 802 26.4
Hund03164 Selenicereus undatus HOM05D007594 ORTHO05D009607 8.9e-33 146.7 167 46.7
Sc11g0006290 Simmondsia chinensis HOM05D007594 ORTHO05D009607 4.0e-25 121.3 376 29.0
Lalb_Chr24g0402821 Lupinus albus HOM05D007594 ORTHO05D009607 2.2e-23 115.5 137 45.3
CSS0016538 Camellia sinensis var. sinensis HOM05D007594 ORTHO05D009607 1.0e-20 106.7 97 54.6
Atru.chr12.1242 Acer truncatum HOM05D007594 ORTHO05D009607 4.7e-18 97.8 90 56.7
AagrBONN_evm.TU.Sc2ySwM_368.2306 Anthoceros agrestis HOM05D007594 ORTHO05D009607 8.7e-12 77.0 164 27.4
COL.COLO4_04921 Corchorus olitorius HOM05D007594 ORTHO05D009607 1.9e-11 75.9 60 56.7
ATR0445G001 Amborella trichopoda HOM05D007594 ORTHO05D009607 1.3e-10 73.2 170 34.1
Sopen07g024520 Solanum pennellii HOM05D007594 ORTHO05D009607 1.6e-10 72.8 44 77.3
Lj2g0024514 Lotus japonicus HOM05D007594 ORTHO05D009607 4.8e-10 71.2 60 56.7
SEGI_38959 Sequoiadendron giganteum HOM05D007594 ORTHO05D009607 6.2e-10 70.9 77 36.4
Aqoxy1G00418 Aquilegia oxysepala HOM05D007594 ORTHO05D009607 1.7e-07 62.8 52 57.7
CBR_g49793 Chara braunii HOM05D000019 ORTHO05D000048 1.9e-06 59.3 133 30.8
SEGI_25891 Sequoiadendron giganteum HOM05D007594 ORTHO05D009607 5.4e-06 57.8 105 38.1


User provided reference genes

Program Settings