Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G897.8 Capsicum annuum HOM05D009195 ORTHO05D000137 3.0e-99 365.2 180 100.0
CAN.G1200.1 Capsicum annuum HOM05D009195 ORTHO05D000137 8.8e-51 204.1 161 65.8
CAN.G692.2 Capsicum annuum HOM05D009195 ORTHO05D000137 8.8e-51 204.1 119 84.0
CAN.G50.5 Capsicum annuum HOM05D009195 ORTHO05D000137 3.1e-40 169.1 108 76.9
CAN.G197.8 Capsicum annuum HOM05D000644 ORTHO05D000137 5.0e-38 161.8 92 82.6
CAN.G242.13 Capsicum annuum HOM05D009195 ORTHO05D000137 8.5e-38 161.0 86 83.7
CAN.G1071.1 Capsicum annuum HOM05D009195 ORTHO05D000137 5.5e-37 158.3 88 81.8
CAN.G1049.8 Capsicum annuum HOM05D009195 ORTHO05D000137 6.1e-36 154.8 126 64.3
CAN.G977.6 Capsicum annuum HOM05D009195 ORTHO05D000137 5.2e-35 151.8 130 60.0
CAN.G75.5 Capsicum annuum HOM05D009195 ORTHO05D000137 8.8e-35 151.0 100 75.0
CAN.G78.23 Capsicum annuum HOM05D009195 ORTHO05D000137 1.4e-32 143.7 150 54.0
CAN.G175.20 Capsicum annuum HOM05D009195 ORTHO05D000137 3.1e-32 142.5 113 64.6
CAN.G468.1 Capsicum annuum HOM05D009195 ORTHO05D000137 3.1e-32 142.5 122 62.3
CAN.G1139.12 Capsicum annuum HOM05D009195 ORTHO05D000137 1.1e-29 134.0 125 56.8
CAN.G1568.2 Capsicum annuum HOM05D009195 ORTHO05D000137 6.1e-28 128.3 117 59.0
CAN.G58.24 Capsicum annuum HOM05D009195 ORTHO05D000137 1.5e-26 123.6 63 88.9
CAN.G1105.1 Capsicum annuum HOM05D009195 ORTHO05D000137 2.6e-26 122.9 72 80.6
CAN.G998.1 Capsicum annuum HOM05D009195 ORTHO05D000137 2.4e-24 116.3 64 81.2
CAN.G139.5 Capsicum annuum HOM05D009195 ORTHO05D000137 7.0e-24 114.8 65 81.5
CAN.G459.4 Capsicum annuum HOM05D009195 ORTHO05D000137 9.2e-24 114.4 70 77.1
CAN.G39.19 Capsicum annuum HOM05D009195 ORTHO05D000137 1.3e-22 110.5 66 77.3
CAN.G763.3 Capsicum annuum HOM05D009195 ORTHO05D000137 2.1e-20 103.2 167 43.7
CAN.G209.15 Capsicum annuum HOM05D000644 ORTHO05D000137 2.0e-18 96.7 63 73.0
CAN.G1385.3 Capsicum annuum HOM05D009195 ORTHO05D000137 9.8e-18 94.4 52 86.5
Nitab4.5_0001684g0060 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.8e-11 73.6 89 44.9
CANSAT11G1718 Cannabis sativa HOM05D009472 ORTHO05D000137 3.1e-11 72.8 92 40.2
Nitab4.5_0002694g0040 Nicotiana tabacum HOM05D005877 ORTHO05D010356 2.0e-10 70.1 69 52.2
CAN.G353.18 Capsicum annuum HOM05D009195 ORTHO05D000137 5.8e-10 68.6 35 80.0
CAN.G209.14 Capsicum annuum HOM05D000644 ORTHO05D000504 2.9e-09 66.2 108 43.5
Nitab4.5_0001725g0060 Nicotiana tabacum HOM05D006812 ORTHO05D000137 1.4e-08 63.9 90 38.9
SGA_v2.0_scaffold160G37744 Striga asiatica HOM05D002262 ORTHO05D000137 1.9e-08 63.5 111 36.0
SGA_v2.0_scaffold23G10125 Striga asiatica HOM05D000679 ORTHO05D000137 3.2e-08 62.8 111 35.1
Nitab4.5_0002329g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000137 5.4e-08 62.0 90 37.8
SGA_v2.0_scaffold2356G54104 Striga asiatica HOM05D000679 ORTHO05D000137 5.4e-08 62.0 116 33.6
Nitab4.5_0001614g0170 Nicotiana tabacum HOM05D002262 ORTHO05D000137 7.0e-08 61.6 99 35.4
SGA_v2.0_scaffold276G46661 Striga asiatica HOM05D000679 ORTHO05D000137 9.2e-08 61.2 101 34.7
Nitab4.5_0014640g0020 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.2e-07 60.8 82 42.7
Nitab4.5_0014346g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.0e-07 60.1 100 35.0
SGA_v2.0_scaffold437G51617 Striga asiatica HOM05D000679 ORTHO05D000137 2.7e-07 59.7 111 34.2
Sopen00g010790 Solanum pennellii HOM05D000679 ORTHO05D000137 3.5e-07 59.3 119 33.6
Nitab4.5_0018223g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 4.6e-07 58.9 98 32.7
CANSAT56G1481 Cannabis sativa HOM05D009472 ORTHO05D000482 6.0e-07 58.5 86 33.7
CANSAT54G1268 Cannabis sativa HOM05D008897 ORTHO05D000137 7.8e-07 58.2 107 29.0
CAN.G77.20 Capsicum annuum HOM05D005063 ORTHO05D000137 1.0e-06 57.8 96 35.4
CAN.G1344.11 Capsicum annuum HOM05D000679 ORTHO05D000482 1.3e-06 57.4 94 35.1
Nitab4.5_0006617g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000137 1.3e-06 57.4 106 32.1
Nitab4.5_0016795g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.3e-06 57.4 88 36.4
SGA_v2.0_scaffold76G25157 Striga asiatica HOM05D002262 ORTHO05D000137 1.3e-06 57.4 101 32.7
CANSAT01G1142 Cannabis sativa HOM05D009472 ORTHO05D000482 1.7e-06 57.0 86 32.6
Nitab4.5_0000902g0220 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.7e-06 57.0 93 35.5
Nitab4.5_0001047g0090 Nicotiana tabacum HOM05D006812 ORTHO05D012242 1.7e-06 57.0 109 30.3
SGA_v2.0_scaffold11G05593 Striga asiatica HOM05D002262 ORTHO05D000482 1.7e-06 57.0 90 35.6
SGA_v2.0_scaffold126G33830 Striga asiatica HOM05D000679 ORTHO05D000137 1.7e-06 57.0 102 33.3
SGA_v2.0_scaffold2471G54126 Striga asiatica HOM05D000679 ORTHO05D000137 1.7e-06 57.0 111 28.8
SGA_v2.0_scaffold59G20643 Striga asiatica HOM05D000679 ORTHO05D000137 1.7e-06 57.0 102 33.3
CANSAT54G2383 Cannabis sativa HOM05D009472 ORTHO05D000137 2.3e-06 56.6 119 27.7
Nitab4.5_0003934g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.3e-06 56.6 85 35.3
CAN.G897.6 Capsicum annuum HOM05D000644 ORTHO05D000137 3.9e-06 55.8 42 61.9
CANSAT78G0758 Cannabis sativa HOM05D008721 ORTHO05D000137 5.0e-06 55.5 86 32.6
CANSAT78G2189 Cannabis sativa HOM05D000679 ORTHO05D000137 5.0e-06 55.5 107 28.0
Nitab4.5_0011140g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 5.0e-06 55.5 92 35.9
Nitab4.5_0016899g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 5.0e-06 55.5 84 35.7
Solyc10g076970.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 5.0e-06 55.5 93 33.3
Nitab4.5_0000832g0150 Nicotiana tabacum HOM05D002262 ORTHO05D000137 6.6e-06 55.1 84 34.5
SGA_v2.0_scaffold178G39480 Striga asiatica HOM05D002262 ORTHO05D000137 6.6e-06 55.1 102 33.3
CANSAT11G0653 Cannabis sativa HOM05D009472 ORTHO05D000137 8.6e-06 54.7 86 32.6
CANSAT21G0269 Cannabis sativa HOM05D009472 ORTHO05D000137 8.6e-06 54.7 86 32.6
CANSAT78G0078 Cannabis sativa HOM05D009472 ORTHO05D000137 8.6e-06 54.7 86 32.6
CANSAT80G2627 Cannabis sativa HOM05D009472 ORTHO05D000137 8.6e-06 54.7 86 32.6
Solyc03g034332.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 8.6e-06 54.7 85 35.3
Solyc08g074525.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 8.6e-06 54.7 101 32.7


User provided reference genes

Program Settings