Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G896.7 Capsicum annuum HOM05D008367 ORTHO05D010529 4.8e-103 377.9 193 100.0
Sopen09g028370 Solanum pennellii HOM05D008367 ORTHO05D010529 1.4e-67 260.0 181 76.2
PGSC0003DMG400010298 Solanum tuberosum HOM05D008367 ORTHO05D010529 2.7e-66 255.8 181 75.7
Nitab4.5_0000470g0140 Nicotiana tabacum HOM05D008367 ORTHO05D010529 3.3e-56 222.2 207 67.1
Cc01_g18350 Coffea canephora HOM05D008367 ORTHO05D010529 4.0e-25 119.0 204 43.1
Hma1.2p1_0273F.1_g109700 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 3.4e-24 115.9 207 38.2
Oeu025845.1 Olea europaea HOM05D008367 ORTHO05D010529 5.6e-19 98.6 197 37.6
Potri.002G038400 Populus trichocarpa HOM05D008367 ORTHO05D010529 7.3e-19 98.2 201 40.3
Duzib138G1787 Durio zibethinus HOM05D008367 ORTHO05D010529 2.1e-18 96.7 197 39.1
Ciclev10022407m.g Citrus clementina HOM05D008367 ORTHO05D010529 8.1e-18 94.7 212 38.2
QL09p038772 Quercus lobata HOM05D008367 ORTHO05D010529 1.8e-17 93.6 199 38.2
Potri.005G224200 Populus trichocarpa HOM05D008367 ORTHO05D010529 2.3e-17 93.2 198 38.4
Hma1.2p1_0576F.1_g182070 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 4.0e-17 92.4 197 36.0
Cpa.g.sc165.10 Carica papaya HOM05D008367 ORTHO05D010529 8.9e-17 91.3 194 38.7
Lj1g0003464 Lotus japonicus HOM05D008367 ORTHO05D010529 8.9e-17 91.3 201 37.8
Medtr7g096950 Medicago truncatula HOM05D008367 ORTHO05D010529 5.8e-16 88.6 191 36.1
Sabra05G0173000 Salix brachista HOM05D008367 ORTHO05D010529 7.5e-16 88.2 196 37.2
SGA_v2.0_scaffold80G25773 Striga asiatica HOM05D008367 ORTHO05D010529 7.5e-16 88.2 204 36.3
Rhsim13G0035000 Rhododendron simsii HOM05D008367 ORTHO05D010529 9.8e-16 87.8 204 36.8
Duzib133G0413 Durio zibethinus HOM05D008367 ORTHO05D010529 2.2e-15 86.7 186 38.7
Sabra02G0030800 Salix brachista HOM05D008367 ORTHO05D010529 3.7e-15 85.9 199 38.2
Phvul.001G161100 Phaseolus vulgaris HOM05D008367 ORTHO05D010529 1.1e-14 84.3 185 38.9
Psat3g056920 Pisum sativum HOM05D008367 ORTHO05D010529 1.1e-14 84.3 192 35.4
Haze_24631 Corylus avellana HOM05D008367 ORTHO05D010529 1.4e-14 84.0 193 37.8
RcHm_v2.0_Chr6g0288121 Rosa chinensis HOM05D008367 ORTHO05D010529 1.9e-14 83.6 205 35.1
Actinidia25788 Actinidia chinensis HOM05D008367 ORTHO05D010529 3.2e-14 82.8 191 37.7
Ca_08676_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 3.2e-14 82.8 192 38.0
Gohir.D07G155080 Gossypium hirsutum HOM05D008367 ORTHO05D010529 3.2e-14 82.8 191 35.1
Gorai.001G177400 Gossypium raimondii HOM05D008367 ORTHO05D010529 3.2e-14 82.8 191 35.1
Migut.N02203 Erythranthe guttata HOM05D008367 ORTHO05D010529 4.1e-14 82.4 198 37.4
Glyma.19G164700 Glycine max HOM05D008367 ORTHO05D010529 7.1e-14 81.6 183 38.3
Gohir.A07G148700 Gossypium hirsutum HOM05D008367 ORTHO05D010529 1.6e-13 80.5 191 34.6
Rhsim01G0263900 Rhododendron simsii HOM05D008367 ORTHO05D010529 1.6e-13 80.5 205 36.6
Cfa002424 Carpinus fangiana HOM05D008367 ORTHO05D010529 2.1e-13 80.1 197 37.6
Manes.13G034100 Manihot esculenta HOM05D008367 ORTHO05D010529 2.1e-13 80.1 189 34.4
Nn3g19655 Nelumbo nucifera HOM05D007526 ORTHO05D009350 3.5e-13 79.3 216 33.8
MD05G1197200 Malus domestica HOM05D008367 ORTHO05D010529 4.6e-13 79.0 206 34.0
Thecc.01G258200 Theobroma cacao HOM05D008367 ORTHO05D010529 4.6e-13 79.0 194 38.1
Lalb_Chr01g0012251 Lupinus albus HOM05D008367 ORTHO05D010529 7.8e-13 78.2 180 35.6
FAN27G3501 Fragaria x ananassa HOM05D004208 ORTHO05D005156 1.3e-12 77.4 195 34.9
VMungo1383G3617 Vigna mungo HOM05D008367 ORTHO05D010529 1.7e-12 77.0 182 37.9
Ca_08710_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 2.3e-12 76.6 192 37.0
Actinidia09550 Actinidia chinensis HOM05D008367 ORTHO05D010529 3.9e-12 75.9 200 37.5
CiPaw.03G264200 Carya illinoinensis HOM05D008367 ORTHO05D010529 6.6e-12 75.1 200 36.5
Atru.chr5.1688 Acer truncatum HOM05D008367 ORTHO05D010529 8.6e-12 74.7 193 35.8
Ca_08702_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 8.6e-12 74.7 191 36.6
FvH4_2g21490 Fragaria vesca HOM05D008367 ORTHO05D010529 3.3e-11 72.8 196 33.2
Aqoxy5G00249 Aquilegia oxysepala HOM05D007526 ORTHO05D009350 7.3e-11 71.6 206 32.5
TAR365G0977 Trochodendron aralioides HOM05D007526 ORTHO05D009350 7.3e-11 71.6 190 35.8
Glyma.03G163200 Glycine max HOM05D008367 ORTHO05D010529 1.6e-10 70.5 186 37.6
Dinv22407 Davidia involucrata HOM05D008367 ORTHO05D010529 2.8e-10 69.7 107 44.9
COL.COLO4_05894 Corchorus olitorius HOM05D008367 ORTHO05D010529 6.2e-10 68.6 195 35.9
DCAR_007739 Daucus carota HOM05D008367 ORTHO05D010529 1.4e-09 67.4 108 41.7
CANSAT01G1417 Cannabis sativa HOM05D008367 ORTHO05D010529 1.8e-09 67.0 201 31.3
FAN20G2986 Fragaria x ananassa HOM05D004208 ORTHO05D005156 2.3e-09 66.6 187 33.2
Nn1g02762 Nelumbo nucifera HOM05D007526 ORTHO05D009350 5.2e-09 65.5 217 32.7
Atru.chr4.2058 Acer truncatum HOM05D007526 ORTHO05D009350 1.5e-08 63.9 192 29.7
Eucgr.H03043 Eucalyptus grandis HOM05D007526 ORTHO05D009350 1.5e-08 63.9 198 28.3
Sopen09g033060 Solanum pennellii HOM05D007526 ORTHO05D009350 1.5e-08 63.9 223 31.8
Actinidia27694 Actinidia chinensis HOM05D008367 ORTHO05D010529 2.0e-08 63.5 183 32.2
Prupe.1G039600 Prunus persica HOM05D007526 ORTHO05D009350 3.4e-08 62.8 210 30.0
Prupe.8G223700 Prunus persica HOM05D008367 ORTHO05D010529 3.4e-08 62.8 207 31.4
FAN24G2300 Fragaria x ananassa HOM05D004208 ORTHO05D005156 5.8e-08 62.0 183 30.6
PGSC0003DMG400017266 Solanum tuberosum HOM05D007526 ORTHO05D009350 5.8e-08 62.0 227 30.4
Ciclev10005975m.g Citrus clementina HOM05D007526 ORTHO05D009350 7.6e-08 61.6 187 28.3
Lsat_1_v5_gn_8_93101 Lactuca sativa HOM05D008367 ORTHO05D010529 2.9e-07 59.7 189 32.3
Lj6g0011756 Lotus japonicus HOM05D007526 ORTHO05D009350 4.9e-07 58.9 190 31.6
Lalb_Chr19g0128211 Lupinus albus HOM05D007526 ORTHO05D009350 6.4e-07 58.5 200 30.5
Manes.15G040900 Manihot esculenta HOM05D007526 ORTHO05D009350 8.4e-07 58.2 198 27.3
Rhsim04G0182300 Rhododendron simsii HOM05D007526 ORTHO05D009350 1.1e-06 57.8 188 29.3
Cfa022958 Carpinus fangiana HOM05D007526 ORTHO05D009350 3.2e-06 56.2 185 25.9
Haze_11381 Corylus avellana HOM05D007526 ORTHO05D009350 4.1e-06 55.8 192 28.1
ECA236G2746 Erigeron canadensis HOM05D008367 ORTHO05D010529 5.4e-06 55.5 195 30.3
PGR004G2347 Punica granatum HOM05D007526 ORTHO05D009350 5.4e-06 55.5 196 29.6
THA.LOC104814518 Tarenaya hassleriana HOM05D013395 ORTHO05D015261 5.4e-06 55.5 182 30.8
DCAR_027319 Daucus carota HOM05D007526 ORTHO05D009350 7.1e-06 55.1 196 25.5
Eucgr.B01554 Eucalyptus grandis HOM05D008367 ORTHO05D010529 7.1e-06 55.1 184 28.8


User provided reference genes

Program Settings