Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G891.1 Capsicum annuum HOM05D003670 ORTHO05D004767 6.9e-47 190.3 94 100.0
Nitab4.5_0000388g0140 Nicotiana tabacum HOM05D003670 ORTHO05D004767 3.1e-39 164.9 94 88.3
Peaxi162Scf00006g00159 Petunia axillaris HOM05D003670 ORTHO05D004767 2.0e-38 162.2 94 84.0
ATR0763G120 Amborella trichopoda HOM05D003670 ORTHO05D004767 3.4e-38 161.4 94 85.1
Nitab4.5_0000029g0340 Nicotiana tabacum HOM05D003670 ORTHO05D004767 3.4e-38 161.4 94 85.1
Nitab4.5_0005765g0040 Nicotiana tabacum HOM05D003670 ORTHO05D004767 4.5e-38 161.0 94 86.2
Ah.10g033690 Amaranthus hybridus HOM05D003670 ORTHO05D004767 5.8e-38 160.6 94 84.0
Ciclev10005196m.g Citrus clementina HOM05D003670 ORTHO05D004767 7.6e-38 160.2 94 83.0
Manes.06G175700 Manihot esculenta HOM05D003670 ORTHO05D004767 7.6e-38 160.2 94 83.0
MBI02_g18168_MAGBIO Magnolia biondii HOM05D003670 ORTHO05D004767 9.9e-38 159.8 94 83.0
Potri.007G069300 Populus trichocarpa HOM05D003670 ORTHO05D004767 9.9e-38 159.8 94 84.0
Manes.14G010300 Manihot esculenta HOM05D003670 ORTHO05D004767 1.3e-37 159.5 94 84.0
Rhsim05G0210500 Rhododendron simsii HOM05D003670 ORTHO05D004767 1.3e-37 159.5 94 84.0
Rhsim06G0242300 Rhododendron simsii HOM05D003670 ORTHO05D004767 1.3e-37 159.5 94 84.0
Sopen02g023800 Solanum pennellii HOM05D003670 ORTHO05D004767 1.7e-37 159.1 94 86.2
TAR583G0001 Trochodendron aralioides HOM05D003670 ORTHO05D004767 1.7e-37 159.1 95 82.1
CANSAT80G2697 Cannabis sativa HOM05D003670 ORTHO05D004767 2.2e-37 158.7 94 83.0
Nitab4.5_0006241g0010 Nicotiana tabacum HOM05D003670 ORTHO05D004767 2.2e-37 158.7 94 83.0
CAN.G943.51 Capsicum annuum HOM05D003670 ORTHO05D004767 2.9e-37 158.3 94 84.0
Cc05_g16310 Coffea canephora HOM05D003670 ORTHO05D004767 2.9e-37 158.3 94 81.9
Solyc07g066580.3 Solanum lycopersicum HOM05D003670 ORTHO05D004767 2.9e-37 158.3 94 84.0
Sopen07g034740 Solanum pennellii HOM05D003670 ORTHO05D004767 2.9e-37 158.3 94 84.0
PGSC0003DMG400022232 Solanum tuberosum HOM05D003670 ORTHO05D004767 2.9e-37 158.3 94 84.0
HanXRQChr11g0335601 Helianthus annuus HOM05D003670 ORTHO05D004767 4.9e-37 157.5 94 83.0
QL04p088965 Quercus lobata HOM05D003670 ORTHO05D004767 4.9e-37 157.5 94 81.9
Solyc02g078990.4 Solanum lycopersicum HOM05D003670 ORTHO05D004767 4.9e-37 157.5 94 85.1
Actinidia12766 Actinidia chinensis HOM05D003670 ORTHO05D004767 6.4e-37 157.1 92 83.7
BcaB05g25180 Brassica carinata HOM05D003670 ORTHO05D004767 6.4e-37 157.1 94 81.9
AUR62037644 Chenopodium quinoa HOM05D003670 ORTHO05D004767 6.4e-37 157.1 94 81.9
COL.COLO4_32264 Corchorus olitorius HOM05D003670 ORTHO05D004767 6.4e-37 157.1 93 81.7
Dinv19592 Davidia involucrata HOM05D003670 ORTHO05D004767 6.4e-37 157.1 94 83.0
Sc06g0002800 Simmondsia chinensis HOM05D003670 ORTHO05D004767 6.4e-37 157.1 94 83.0
QL04p088520 Quercus lobata HOM05D003670 ORTHO05D004767 8.4e-37 156.8 94 81.9
DCAR_019919 Daucus carota HOM05D003670 ORTHO05D004767 1.1e-36 156.4 94 81.9
Hma1.2p1_0151F.1_g067325 Hydrangea macrophylla HOM05D003670 ORTHO05D004767 1.1e-36 156.4 94 81.9
PSO675G6901 Papaver somniferum HOM05D003670 ORTHO05D004767 1.1e-36 156.4 94 81.9
Sp5g34280 Schrenkiella parvula HOM05D003670 ORTHO05D004767 1.1e-36 156.4 94 81.9
EL10Ac2g03264 Beta vulgaris HOM05D003670 ORTHO05D004767 1.4e-36 156.0 92 81.5
CSS0006756 Camellia sinensis var. sinensis HOM05D003670 ORTHO05D004767 1.9e-36 155.6 94 81.9
Lj3g0014239 Lotus japonicus HOM05D003670 ORTHO05D004767 1.9e-36 155.6 94 81.9
MD10G1208500 Malus domestica HOM05D003670 ORTHO05D004767 1.9e-36 155.6 94 80.9
THA.LOC104812362 Tarenaya hassleriana HOM05D003670 ORTHO05D004767 1.9e-36 155.6 94 81.9
Aa31LG4G1790 Aethionema arabicum HOM05D003670 ORTHO05D004767 2.4e-36 155.2 94 80.9
Cfa022976 Carpinus fangiana HOM05D003670 ORTHO05D004767 2.4e-36 155.2 94 79.8
Medtr2g067080 Medicago truncatula HOM05D003670 ORTHO05D004767 2.4e-36 155.2 94 81.9
Hund20101 Selenicereus undatus HOM05D003670 ORTHO05D004767 2.4e-36 155.2 94 81.9
SGA_v2.0_scaffold49G18190 Striga asiatica HOM05D003670 ORTHO05D004767 2.4e-36 155.2 94 79.8
AL2G39700 Arabidopsis lyrata HOM05D003670 ORTHO05D004767 3.2e-36 154.8 94 79.8
Haze_07818 Corylus avellana HOM05D003670 ORTHO05D004767 3.2e-36 154.8 94 79.8
ECA236G3562 Erigeron canadensis HOM05D003670 ORTHO05D004767 3.2e-36 154.8 94 80.9
FvH4_3g14990 Fragaria vesca HOM05D003670 ORTHO05D004767 3.2e-36 154.8 94 80.9
FAN21G1395 Fragaria x ananassa HOM05D003670 ORTHO05D004767 3.2e-36 154.8 94 80.9
Peaxi162Scf00452g00333 Petunia axillaris HOM05D003670 ORTHO05D004767 3.2e-36 154.8 94 80.9
RcHm_v2.0_Chr5g0024611 Rosa chinensis HOM05D003670 ORTHO05D004767 3.2e-36 154.8 94 80.9
Thecc.07G180400 Theobroma cacao HOM05D003670 ORTHO05D004767 3.2e-36 154.8 92 82.6
CiPaw.11G061900 Carya illinoinensis HOM05D003670 ORTHO05D004767 4.2e-36 154.5 94 80.9
Lj2A15G76 Lonicera japonica HOM05D003670 ORTHO05D004767 4.2e-36 154.5 94 80.9
Psat1g013760 Pisum sativum HOM05D003670 ORTHO05D004767 4.2e-36 154.5 94 80.9
PGR031G1669 Punica granatum HOM05D003670 ORTHO05D004767 4.2e-36 154.5 94 79.8
TWI39G0091 Tripterygium wilfordii HOM05D003670 ORTHO05D004767 4.2e-36 154.5 93 80.6
MSTRG.14566 Avicennia marina HOM05D003670 ORTHO05D004767 5.4e-36 154.1 94 80.9
BcaB02g07206 Brassica carinata HOM05D003670 ORTHO05D004767 5.4e-36 154.1 94 79.8
BcaC08g45368 Brassica carinata HOM05D003670 ORTHO05D004767 5.4e-36 154.1 94 79.8
A07p27230 Brassica napus HOM05D003670 ORTHO05D004767 5.4e-36 154.1 94 79.8
C06p30000 Brassica napus HOM05D003670 ORTHO05D004767 5.4e-36 154.1 94 79.8
BolC6t38160H Brassica oleracea HOM05D003670 ORTHO05D004767 5.4e-36 154.1 94 79.8
BraA07t30367Z Brassica rapa HOM05D003670 ORTHO05D004767 5.4e-36 154.1 94 79.8
CARHR072860 Cardamine hirsuta HOM05D003670 ORTHO05D004767 5.4e-36 154.1 94 80.9
Ca_03600_v3 Cicer arietinum L. HOM05D003670 ORTHO05D004767 5.4e-36 154.1 94 79.8
Thhalv10007910m.g Eutrema salsugineum HOM05D003670 ORTHO05D004767 5.4e-36 154.1 94 79.8
FAN11G2825 Fragaria x ananassa HOM05D003670 ORTHO05D004767 5.4e-36 154.1 94 80.9
Gohir.D13G127300 Gossypium hirsutum HOM05D003670 ORTHO05D004767 5.4e-36 154.1 92 82.6
Gorai.013G142500 Gossypium raimondii HOM05D003670 ORTHO05D004767 5.4e-36 154.1 92 82.6
MD05G1228000 Malus domestica HOM05D003670 ORTHO05D004767 5.4e-36 154.1 94 79.8
Prupe.4G134300 Prunus persica HOM05D003670 ORTHO05D004767 5.4e-36 154.1 94 80.9
THA.LOC104813608 Tarenaya hassleriana HOM05D003670 ORTHO05D004767 5.4e-36 154.1 94 80.9
TPR.G33813 Trifolium pratense HOM05D003670 ORTHO05D004767 5.4e-36 154.1 94 79.8
CARHR016930 Cardamine hirsuta HOM05D003670 ORTHO05D004767 7.1e-36 153.7 94 78.7
Thhalv10018699m.g Eutrema salsugineum HOM05D003670 ORTHO05D004767 7.1e-36 153.7 94 80.9
FAN25G1710 Fragaria x ananassa HOM05D003670 ORTHO05D004767 7.1e-36 153.7 94 79.8
Zm00001eb031400 Zea mays HOM05D003670 ORTHO05D004767 7.1e-36 153.7 94 79.8
CsaV3_3G018980 Cucumis sativus L. HOM05D003670 ORTHO05D004767 9.3e-36 153.3 94 77.7
Lsat_1_v5_gn_7_110680 Lactuca sativa HOM05D003670 ORTHO05D004767 9.3e-36 153.3 94 80.9
Nn7g37780 Nelumbo nucifera HOM05D003670 ORTHO05D004767 9.3e-36 153.3 94 80.9
Potri.005G095300 Populus trichocarpa HOM05D003670 ORTHO05D004767 9.3e-36 153.3 94 80.9
Sabra05G0078800 Salix brachista HOM05D003670 ORTHO05D004767 9.3e-36 153.3 94 79.8
vmacro11699 Vaccinium macrocarpon HOM05D003670 ORTHO05D004767 9.3e-36 153.3 94 81.9
BcaC08g47490 Brassica carinata HOM05D003670 ORTHO05D004767 1.2e-35 152.9 94 79.8
C06p53140 Brassica napus HOM05D003670 ORTHO05D004767 1.2e-35 152.9 94 79.8
BolC6t40330H Brassica oleracea HOM05D003670 ORTHO05D004767 1.2e-35 152.9 94 79.8
BraA07t31943Z Brassica rapa HOM05D003670 ORTHO05D004767 1.2e-35 152.9 94 79.8
Carub.0002s2610 Capsella rubella HOM05D003670 ORTHO05D004767 1.2e-35 152.9 94 79.8
Cpa.g.sc34.17 Carica papaya HOM05D003670 ORTHO05D004767 1.2e-35 152.9 94 79.8
Duzib187G0441 Durio zibethinus HOM05D003670 ORTHO05D004767 1.2e-35 152.9 94 79.8
Glyma.08G167100 Glycine max HOM05D003670 ORTHO05D004767 1.2e-35 152.9 94 79.8
Oeu002796.1 Olea europaea HOM05D003670 ORTHO05D004767 1.2e-35 152.9 94 78.7
Os12g0608600 Oryza sativa ssp. japonica HOM05D003670 ORTHO05D004767 1.2e-35 152.9 94 78.7
VMungo1080G1660 Vigna mungo HOM05D003670 ORTHO05D004767 1.2e-35 152.9 94 79.8
AUR62039184 Chenopodium quinoa HOM05D003670 ORTHO05D004767 1.6e-35 152.5 94 78.7
ClCG05G009800 Citrullus lanatus HOM05D003670 ORTHO05D000003 1.6e-35 152.5 94 76.6
Phvul.005G050400 Phaseolus vulgaris HOM05D003670 ORTHO05D004767 1.6e-35 152.5 94 78.7
AT1G79230 Arabidopsis thaliana HOM05D003670 ORTHO05D004767 2.1e-35 152.1 94 79.8
Migut.H01671 Erythranthe guttata HOM05D003670 ORTHO05D004767 2.1e-35 152.1 94 78.7
Glyma.15G260300 Glycine max HOM05D003670 ORTHO05D004767 2.1e-35 152.1 94 79.8
Lalb_Chr25g0284691 Lupinus albus HOM05D003670 ORTHO05D004767 2.1e-35 152.1 94 79.8
PSO541G1524 Papaver somniferum HOM05D003670 ORTHO05D004767 2.7e-35 151.8 94 79.8
MELO3C019489.2 Cucumis melo HOM05D003670 ORTHO05D004767 3.5e-35 151.4 94 76.6
Sabra07G0056700 Salix brachista HOM05D003670 ORTHO05D004767 3.5e-35 151.4 94 78.7
TWI38G1711 Tripterygium wilfordii HOM05D003670 ORTHO05D004767 3.5e-35 151.4 92 80.4
HPP92_013192 Vanilla planifolia HOM05D003670 ORTHO05D004767 4.6e-35 151.0 94 77.7
GSVIVG01036786001 Vitis vinifera HOM05D003670 ORTHO05D004767 4.6e-35 151.0 94 78.7
Carub.0001s1620 Capsella rubella HOM05D003670 ORTHO05D004767 6.0e-35 150.6 94 76.6
Sp1g14610 Schrenkiella parvula HOM05D003670 ORTHO05D004767 6.0e-35 150.6 94 76.6
Aqoxy1G01484 Aquilegia oxysepala HOM05D003670 ORTHO05D004767 7.9e-35 150.2 94 76.6
arahy.Tifrunner.gnm1.ann1.36F1KB Arachis hypogaea HOM05D003670 ORTHO05D004767 7.9e-35 150.2 94 77.7
arahy.Tifrunner.gnm1.ann1.YZ7E83 Arachis hypogaea HOM05D003670 ORTHO05D004767 7.9e-35 150.2 94 77.7
A07p44350 Brassica napus HOM05D003670 ORTHO05D004767 7.9e-35 150.2 94 77.7
Gohir.A13G123400 Gossypium hirsutum HOM05D003670 ORTHO05D004767 7.9e-35 150.2 92 79.3
AT1G16460 Arabidopsis thaliana HOM05D003670 ORTHO05D004767 1.0e-34 149.8 94 76.6
MSTRG.7076 Avicennia marina HOM05D003670 ORTHO05D004767 1.3e-34 149.4 94 76.6
BcaB02g06624 Brassica carinata HOM05D003670 ORTHO05D004767 1.3e-34 149.4 94 76.6
Eucgr.F04458 Eucalyptus grandis HOM05D003670 ORTHO05D004767 1.8e-34 149.1 94 76.6
Sed0012107 Sechium edule HOM05D003670 ORTHO05D004767 1.8e-34 149.1 94 76.6
unitig_8.g4750 Utricularia gibba HOM05D003670 ORTHO05D004767 3.9e-34 147.9 94 76.6
AL1G28600 Arabidopsis lyrata HOM05D003670 ORTHO05D004767 5.1e-34 147.5 94 76.6
BcaC05g25571 Brassica carinata HOM05D003670 ORTHO05D004767 5.1e-34 147.5 94 74.5
C05p14650 Brassica napus HOM05D003670 ORTHO05D004767 5.1e-34 147.5 94 74.5
BolC5t30186H Brassica oleracea HOM05D003670 ORTHO05D004767 5.1e-34 147.5 94 74.5
BraA06t24401Z Brassica rapa HOM05D003670 ORTHO05D004767 5.1e-34 147.5 94 76.6
unitig_578.g16333 Utricularia gibba HOM05D003670 ORTHO05D004767 6.7e-34 147.1 94 75.5
Aa31LG7G1000 Aethionema arabicum HOM05D003670 ORTHO05D004767 8.7e-34 146.7 92 76.1
A06p12380 Brassica napus HOM05D003670 ORTHO05D004767 8.7e-34 146.7 94 73.4
SEGI_21826 Sequoiadendron giganteum HOM05D003670 ORTHO05D004767 1.5e-33 146.0 94 75.5
Hma1.2p1_0269F.1_g107810 Hydrangea macrophylla HOM05D003670 ORTHO05D004767 9.6e-33 143.3 91 76.9
Duzib213G1009 Durio zibethinus HOM05D003670 ORTHO05D004767 1.3e-32 142.9 98 75.5
CDE02G0962 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 1.6e-32 142.5 91 73.6
SGA_v2.0_scaffold186G40197 Striga asiatica HOM05D003670 ORTHO05D004767 3.7e-32 141.4 94 72.3
DCAR_016837 Daucus carota HOM05D003670 ORTHO05D004767 6.2e-32 140.6 94 73.4
C03p82980 Brassica napus HOM05D003670 ORTHO05D004767 1.1e-31 139.8 94 75.5
BcaC01g00674 Brassica carinata HOM05D003670 ORTHO05D004767 1.8e-31 139.0 92 76.1
CDE06G2006 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 4.0e-31 137.9 94 69.1
BcaC04g18607 Brassica carinata HOM05D003670 ORTHO05D004767 6.9e-31 137.1 92 75.0
Oeu043724.2 Olea europaea HOM05D003670 ORTHO05D004767 1.5e-30 136.0 98 70.4
C01p17180 Brassica napus HOM05D003670 ORTHO05D004767 4.9e-29 131.0 90 73.3
BolC1t01654H Brassica oleracea HOM05D003670 ORTHO05D004767 6.4e-29 130.6 89 74.2
Zm00001eb207410 Zea mays HOM05D003670 ORTHO05D004767 1.4e-28 129.4 93 67.7
Os02g0167100 Oryza sativa ssp. japonica HOM05D003670 ORTHO05D004767 1.9e-28 129.0 93 63.4
BolC9t58925H Brassica oleracea HOM05D003670 ORTHO05D004767 4.2e-28 127.9 90 71.1
Mapoly0058s0078 Marchantia polymorpha HOM05D003670 ORTHO05D004767 3.9e-26 121.3 82 64.6
AagrBONN_evm.TU.Sc2ySwM_344.5346 Anthoceros agrestis HOM05D003670 ORTHO05D004767 1.1e-25 119.8 83 68.7
Pp3c9_17670 Physcomitrium patens HOM05D003670 ORTHO05D004767 3.7e-24 114.8 92 60.9
Oeu010650.2 Olea europaea HOM05D003670 ORTHO05D004767 6.9e-23 110.5 94 63.8
HPP92_013209 Vanilla planifolia HOM05D003670 ORTHO05D004767 9.0e-23 110.2 55 90.9
C02p36310 Brassica napus HOM05D003670 ORTHO05D004767 2.9e-21 105.1 92 60.9
SMO119G0061 Selaginella moellendorffii HOM05D003670 ORTHO05D004767 3.8e-21 104.8 84 58.3
RcHm_v2.0_Chr5g0024731 Rosa chinensis HOM05D003670 ORTHO05D004767 1.2e-19 99.8 94 61.7
BcaC06g34801 Brassica carinata HOM05D003670 ORTHO05D004767 1.3e-18 96.3 92 59.8
BolC7t42971H Brassica oleracea HOM05D003670 ORTHO05D004767 1.8e-18 95.9 83 61.4
Cre13.g607050 Chlamydomonas reinhardtii HOM05D003670 ORTHO05D004767 5.1e-18 94.4 86 55.8
CBR_g17038 Chara braunii HOM05D003670 ORTHO05D004767 7.4e-17 90.5 78 53.8
PRCOL_00006295 Prasinoderma coloniale HOM05D003670 ORTHO05D004767 3.7e-16 88.2 74 55.4
FAN16G2550 Fragaria x ananassa HOM05D003670 ORTHO05D004767 2.4e-15 85.5 55 76.4
MCO09G588 Micromonas commoda HOM05D003670 ORTHO05D004767 9.0e-15 83.6 82 52.4
MD05G1228700 Malus domestica HOM05D003670 ORTHO05D004767 2.0e-14 82.4 55 70.9
A02p22680 Brassica napus HOM05D003670 ORTHO05D004767 4.5e-14 81.3 55 70.9
Lsat_1_v5_gn_4_93521 Lactuca sativa HOM05D003670 ORTHO05D004767 6.5e-13 77.4 39 92.3
MD05G1228600 Malus domestica HOM05D003670 ORTHO05D004767 3.2e-12 75.1 39 89.7
Aqoxy1G03000 Aquilegia oxysepala HOM05D003670 ORTHO05D004767 3.6e-11 71.6 40 80.0
BcaC02g07679 Brassica carinata HOM05D003670 ORTHO05D014971 1.5e-09 66.2 38 81.6
BcaC05g28269 Brassica carinata HOM05D003670 ORTHO05D014971 8.2e-08 60.5 36 80.6
AagrBONN_evm.TU.Sc2ySwM_117.2139 Anthoceros agrestis HOM05D003670 ORTHO05D031137 3.1e-07 58.5 67 38.8
Lsat_1_v5_gn_8_160501 Lactuca sativa HOM05D003670 ORTHO05D002209 1.2e-06 56.6 30 93.3


User provided reference genes

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