Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G890.6 Capsicum annuum HOM05D006610 ORTHO05D008447 2.2e-106 389.0 201 100.0
Sopen02g028290 Solanum pennellii HOM05D006610 ORTHO05D008447 3.9e-92 341.7 208 87.0
PGSC0003DMG400003653 Solanum tuberosum HOM05D006610 ORTHO05D008447 6.7e-92 340.9 208 88.0
Solyc02g083500.3 Solanum lycopersicum HOM05D006610 ORTHO05D008447 2.2e-90 335.9 208 86.1
Nitab4.5_0008552g0010 Nicotiana tabacum HOM05D006610 ORTHO05D008447 9.1e-89 330.5 214 83.6
Nitab4.5_0001789g0060 Nicotiana tabacum HOM05D006610 ORTHO05D008447 1.5e-83 313.2 219 80.4
CSS0043605 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 3.5e-72 275.4 212 69.8
TAR186G0001 Trochodendron aralioides HOM05D006610 ORTHO05D008447 7.7e-72 274.2 207 70.0
Peaxi162Scf00328g00315 Petunia axillaris HOM05D006610 ORTHO05D008447 1.7e-71 273.1 158 90.5
Sabra05G0089400 Salix brachista HOM05D006610 ORTHO05D008447 5.0e-71 271.6 221 67.0
Manes.02G109300 Manihot esculenta HOM05D006610 ORTHO05D008447 8.5e-71 270.8 220 66.8
Potri.005G109100 Populus trichocarpa HOM05D006610 ORTHO05D008447 8.5e-71 270.8 220 66.8
COL.COLO4_22482 Corchorus olitorius HOM05D006610 ORTHO05D008447 1.5e-70 270.0 216 69.0
Hma1.2p1_0315F.1_g122440 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 9.4e-70 267.3 211 70.1
ECA246G3062 Erigeron canadensis HOM05D006610 ORTHO05D008447 1.2e-69 266.9 190 75.3
AUR62018012 Chenopodium quinoa HOM05D006610 ORTHO05D008447 3.6e-69 265.4 195 72.8
GSVIVG01007223001 Vitis vinifera HOM05D006610 ORTHO05D008447 3.6e-69 265.4 212 68.9
HanXRQChr16g0531751 Helianthus annuus HOM05D006610 ORTHO05D008447 4.7e-69 265.0 208 70.2
Actinidia28724 Actinidia chinensis HOM05D006610 ORTHO05D008447 6.1e-69 264.6 207 69.6
AUR62003705 Chenopodium quinoa HOM05D006610 ORTHO05D008447 8.0e-69 264.2 176 77.8
Hund16514 Selenicereus undatus HOM05D006610 ORTHO05D008447 1.0e-68 263.8 209 66.5
Atru.chr3.883 Acer truncatum HOM05D006610 ORTHO05D008447 3.0e-68 262.3 209 67.5
Atru.chr3.894 Acer truncatum HOM05D006610 ORTHO05D008447 3.0e-68 262.3 209 67.5
Gorai.003G006700 Gossypium raimondii HOM05D006610 ORTHO05D008447 3.0e-68 262.3 215 67.0
Rhsim08G0031200 Rhododendron simsii HOM05D006610 ORTHO05D008447 8.8e-68 260.8 232 63.4
EL10Ac6g15167 Beta vulgaris HOM05D006610 ORTHO05D008447 1.2e-67 260.4 193 70.5
Phvul.003G266300 Phaseolus vulgaris HOM05D006610 ORTHO05D008447 1.2e-67 260.4 209 66.5
CSS0036095 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 2.0e-67 259.6 212 67.0
Duzib187G1817 Durio zibethinus HOM05D006610 ORTHO05D008447 2.0e-67 259.6 215 67.9
Ciclev10026475m.g Citrus clementina HOM05D006610 ORTHO05D008447 3.4e-67 258.8 215 67.9
VMungo0251G0375 Vigna mungo HOM05D006610 ORTHO05D008447 4.4e-67 258.5 209 65.6
Cc07_g11190 Coffea canephora HOM05D006610 ORTHO05D008447 5.7e-67 258.1 216 68.5
Cpa.g.sc6.302 Carica papaya HOM05D006610 ORTHO05D008447 9.8e-67 257.3 212 65.1
Gohir.D03G006400 Gossypium hirsutum HOM05D006610 ORTHO05D008447 9.8e-67 257.3 215 66.0
TWI09G0665 Tripterygium wilfordii HOM05D006610 ORTHO05D008447 1.3e-66 256.9 217 64.5
Gohir.A02G173500 Gossypium hirsutum HOM05D006610 ORTHO05D008447 4.8e-66 255.0 213 67.1
Haze_03713 Corylus avellana HOM05D006610 ORTHO05D008447 6.3e-66 254.6 211 67.3
DCAR_014043 Daucus carota HOM05D006610 ORTHO05D008447 1.8e-65 253.1 219 65.3
vmacro18433 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 1.8e-65 253.1 150 83.3
Lj4A224G29 Lonicera japonica HOM05D006610 ORTHO05D008447 5.4e-65 251.5 150 82.7
arahy.Tifrunner.gnm1.ann1.UN150X Arachis hypogaea HOM05D006610 ORTHO05D008447 1.2e-64 250.4 211 62.6
Aqoxy6G02108 Aquilegia oxysepala HOM05D006610 ORTHO05D008447 3.5e-64 248.8 152 80.9
Cfa007018 Carpinus fangiana HOM05D006610 ORTHO05D008447 4.5e-64 248.4 235 62.1
Prupe.7G173500 Prunus persica HOM05D006610 ORTHO05D008447 4.5e-64 248.4 215 64.2
arahy.Tifrunner.gnm1.ann1.M7YZEH Arachis hypogaea HOM05D006610 ORTHO05D008447 5.9e-64 248.1 217 60.8
Sed0015497 Sechium edule HOM05D006610 ORTHO05D008447 7.7e-64 247.7 221 61.1
PGR119G0279 Punica granatum HOM05D006610 ORTHO05D008447 1.7e-63 246.5 228 61.8
MSTRG.15312 Avicennia marina HOM05D006610 ORTHO05D008447 2.3e-63 246.1 202 65.3
MD02G1124800 Malus domestica HOM05D006610 ORTHO05D008447 2.3e-63 246.1 216 62.5
CANSAT01G0612 Cannabis sativa HOM05D006610 ORTHO05D008447 2.9e-63 245.7 213 63.4
CsaV3_3G000580 Cucumis sativus L. HOM05D006610 ORTHO05D008447 2.9e-63 245.7 214 64.5
Migut.H00253 Erythranthe guttata HOM05D006610 ORTHO05D008447 3.8e-63 245.4 207 65.2
AUR62034480 Chenopodium quinoa HOM05D006610 ORTHO05D008447 6.6e-63 244.6 156 76.9
FAN28G2812 Fragaria x ananassa HOM05D006610 ORTHO05D008447 6.6e-63 244.6 166 76.5
ATR0180G027 Amborella trichopoda HOM05D006610 ORTHO05D008447 1.5e-62 243.4 152 79.6
FAN19G1298 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.5e-62 243.4 166 75.9
Glyma.16G123000 Glycine max HOM05D006610 ORTHO05D008447 1.5e-62 243.4 216 62.0
Eucgr.I02316 Eucalyptus grandis HOM05D006610 ORTHO05D008447 2.5e-62 242.7 219 64.8
RcHm_v2.0_Chr2g0098651 Rosa chinensis HOM05D006610 ORTHO05D008447 2.5e-62 242.7 214 64.0
CDE09G0967 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 5.5e-62 241.5 172 75.0
Lalb_Chr16g0391471 Lupinus albus HOM05D006610 ORTHO05D008447 9.5e-62 240.7 212 63.7
SGA_v2.0_scaffold49G18127 Striga asiatica HOM05D006610 ORTHO05D008447 9.5e-62 240.7 209 63.2
Lj4g0021807 Lotus japonicus HOM05D006610 ORTHO05D008447 1.2e-61 240.4 207 63.3
MELO3C013747.2 Cucumis melo HOM05D006610 ORTHO05D008447 2.8e-61 239.2 211 63.5
THA.LOC104819168 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 2.8e-61 239.2 205 62.4
Sp2g30600 Schrenkiella parvula HOM05D006610 ORTHO05D008447 6.8e-60 234.6 179 67.0
FAN23G0795 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.2e-59 233.8 192 67.7
CDE02G2830 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 1.5e-59 233.4 198 65.7
THA.LOC104821342 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 2.0e-59 233.0 179 66.5
TPR.G19505 Trifolium pratense HOM05D006610 ORTHO05D008447 2.6e-59 232.6 208 61.1
Psat4g102280 Pisum sativum HOM05D006610 ORTHO05D008447 3.4e-59 232.3 206 60.7
SalBow3G0370 Salvia bowleyana HOM05D006610 ORTHO05D008447 5.7e-59 231.5 147 77.6
Medtr8g075110 Medicago truncatula HOM05D006610 ORTHO05D008447 7.5e-59 231.1 210 59.0
Os09g0541700 Oryza sativa ssp. japonica HOM05D006610 ORTHO05D008447 7.5e-59 231.1 153 73.9
Gohir.D11G179450 Gossypium hirsutum HOM05D006610 ORTHO05D008447 6.3e-58 228.0 151 78.1
SalBow3G0548 Salvia bowleyana HOM05D006610 ORTHO05D008447 6.3e-58 228.0 209 62.7
Gorai.007G191500 Gossypium raimondii HOM05D006610 ORTHO05D008447 1.4e-57 226.9 196 67.9
Nn6g31943 Nelumbo nucifera HOM05D006610 ORTHO05D008447 2.4e-57 226.1 201 62.7
AUR62018013 Chenopodium quinoa HOM05D006610 ORTHO05D008447 3.1e-57 225.7 195 64.1
PSO170G5432 Papaver somniferum HOM05D006610 ORTHO05D008447 3.1e-57 225.7 153 72.5
AL8G45500 Arabidopsis lyrata HOM05D006610 ORTHO05D008447 7.0e-57 224.6 162 68.5
FAN26G1933 Fragaria x ananassa HOM05D006610 ORTHO05D008447 2.7e-56 222.6 210 61.9
Lsat_1_v5_gn_3_71540 Lactuca sativa HOM05D006610 ORTHO05D008447 3.5e-56 222.2 173 72.3
Carub.0008s2842 Capsella rubella HOM05D006610 ORTHO05D008447 1.1e-54 217.2 204 58.3
MBI05_g19586_MAGBIO Magnolia biondii HOM05D006610 ORTHO05D008447 1.1e-54 217.2 128 81.2
A02p44620 Brassica napus HOM05D006610 ORTHO05D008447 1.6e-53 213.4 182 62.1
BraA02t09378Z Brassica rapa HOM05D006610 ORTHO05D008447 1.6e-53 213.4 182 62.1
BolC2t12560H Brassica oleracea HOM05D006610 ORTHO05D008447 3.6e-53 212.2 186 62.4
AT5G66090 Arabidopsis thaliana HOM05D006610 ORTHO05D008447 4.7e-53 211.8 211 56.9
Thhalv10004913m.g Eutrema salsugineum HOM05D006610 ORTHO05D008447 4.7e-53 211.8 211 57.3
ClCG10G000510 Citrullus lanatus HOM05D006610 ORTHO05D008447 6.1e-53 211.5 222 55.0
Duzib147G1005 Durio zibethinus HOM05D006610 ORTHO05D008447 6.8e-52 208.0 217 59.0
CARHR281660 Cardamine hirsuta HOM05D006610 ORTHO05D008447 1.2e-51 207.2 180 61.7
AagrBONN_evm.TU.Sc2ySwM_369.589 Anthoceros agrestis HOM05D006610 ORTHO05D008447 2.6e-51 206.1 187 57.8
Aa31LG1G14570 Aethionema arabicum HOM05D006610 ORTHO05D008447 5.8e-51 204.9 224 55.4
Pp3c9_6630 Physcomitrium patens HOM05D006610 ORTHO05D008447 2.2e-50 203.0 167 58.1
unitig_736.g22562 Utricularia gibba HOM05D006610 ORTHO05D008447 2.9e-50 202.6 220 52.7
SEGI_37776 Sequoiadendron giganteum HOM05D006610 ORTHO05D008447 8.3e-50 201.1 205 53.2
Oeu000676.1 Olea europaea HOM05D006610 ORTHO05D008447 1.0e-47 194.1 108 88.9
QL06p051388 Quercus lobata HOM05D006610 ORTHO05D008447 1.1e-46 190.7 109 84.4
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 2.8e-45 186.0 171 56.7
Lsat_1_v5_gn_2_20941 Lactuca sativa HOM05D006610 ORTHO05D008447 1.7e-42 176.8 149 67.8
Hma1.2p1_3766F.1_g337520 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 4.9e-42 175.3 110 80.9
Thecc.01G013000 Theobroma cacao HOM05D006610 ORTHO05D008447 6.8e-36 154.8 151 58.9
Gohir.A11G172600 Gossypium hirsutum HOM05D006610 ORTHO05D008447 3.2e-33 146.0 151 59.6
Sc03g0003740 Simmondsia chinensis HOM05D006610 ORTHO05D008447 3.2e-33 146.0 146 58.2
Nn5g30811 Nelumbo nucifera HOM05D006610 ORTHO05D008447 1.6e-32 143.7 138 60.1
HPP92_025898 Vanilla planifolia HOM05D006610 ORTHO05D008447 1.7e-31 140.2 96 70.8
Dinv08559 Davidia involucrata HOM05D006610 ORTHO05D008447 1.9e-30 136.7 72 88.9
FvH4_1g11240 Fragaria vesca HOM05D006610 ORTHO05D008447 3.3e-30 136.0 108 65.7
Cre15.g638400 Chlamydomonas reinhardtii HOM05D006610 ORTHO05D008447 2.0e-27 126.7 147 46.9
BcaC07g37739 Brassica carinata HOM05D006610 ORTHO05D008447 4.3e-22 109.0 68 75.0
BolC8t48119H Brassica oleracea HOM05D006610 ORTHO05D008447 4.3e-22 109.0 68 75.0
Solyc02g083525.1 Solanum lycopersicum HOM05D006610 ORTHO05D008447 1.2e-16 90.9 52 88.5
vmacro18432 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 1.2e-16 90.9 58 72.4
QL06p051391 Quercus lobata HOM05D006610 ORTHO05D008447 3.6e-13 79.3 99 49.5


User provided reference genes

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