Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G890.37 Capsicum annuum HOM05D007821 ORTHO05D009897 3.0e-63 245.0 119 100.0
Solyc02g083440.3 Solanum lycopersicum HOM05D007821 ORTHO05D009897 8.7e-55 216.9 120 88.3
PGSC0003DMG400003657 Solanum tuberosum HOM05D007821 ORTHO05D009897 8.7e-55 216.9 120 88.3
Sopen02g028230 Solanum pennellii HOM05D007821 ORTHO05D009897 7.3e-54 213.8 120 86.7
Nitab4.5_0006899g0050 Nicotiana tabacum HOM05D007821 ORTHO05D009897 4.2e-49 198.0 126 78.6
Peaxi162Scf00328g00213 Petunia axillaris HOM05D007821 ORTHO05D009897 7.9e-48 193.7 126 76.2
Nitab4.5_0016722g0010 Nicotiana tabacum HOM05D007821 ORTHO05D009897 3.3e-46 188.3 126 75.4
Dinv40139 Davidia involucrata HOM05D007821 ORTHO05D009897 2.1e-32 142.5 105 66.7
Duzib147G1309 Durio zibethinus HOM05D007821 ORTHO05D009897 1.3e-31 139.8 110 63.6
Thecc.01G012400 Theobroma cacao HOM05D007821 ORTHO05D009897 2.3e-31 139.0 122 59.8
Gohir.A11G172200 Gossypium hirsutum HOM05D007821 ORTHO05D009897 3.3e-30 135.2 107 62.6
COL.COLO4_22487 Corchorus olitorius HOM05D007821 ORTHO05D009897 9.6e-30 133.7 107 61.7
RcHm_v2.0_Chr2g0098471 Rosa chinensis HOM05D007821 ORTHO05D009897 1.6e-29 132.9 109 63.3
Gohir.D11G179200 Gossypium hirsutum HOM05D007821 ORTHO05D009897 3.7e-29 131.7 106 62.3
Gorai.007G191100 Gossypium raimondii HOM05D007821 ORTHO05D009897 3.7e-29 131.7 106 62.3
CiPaw.07G062800 Carya illinoinensis HOM05D007821 ORTHO05D009897 4.8e-29 131.3 120 56.7
Hma1.2p1_0315F.1_g122510 Hydrangea macrophylla HOM05D007821 ORTHO05D009897 1.4e-28 129.8 103 65.0
Manes.02G109600 Manihot esculenta HOM05D007821 ORTHO05D009897 3.1e-28 128.6 132 53.8
Cfa007023 Carpinus fangiana HOM05D007821 ORTHO05D009897 6.9e-28 127.5 107 59.8
FvH4_1g11180 Fragaria vesca HOM05D007821 ORTHO05D009897 9.0e-28 127.1 109 60.6
FAN19G2165 Fragaria x ananassa HOM05D007821 ORTHO05D009897 9.0e-28 127.1 109 60.6
FAN28G2391 Fragaria x ananassa HOM05D007821 ORTHO05D009897 9.0e-28 127.1 109 60.6
DCAR_011577 Daucus carota HOM05D007821 ORTHO05D009897 1.2e-27 126.7 113 58.4
Prupe.7G174100 Prunus persica HOM05D007821 ORTHO05D009897 4.5e-27 124.8 110 60.9
TWI73G0676 Tripterygium wilfordii HOM05D007821 ORTHO05D009897 4.5e-27 124.8 110 60.0
Potri.005G108633 Populus trichocarpa HOM05D007821 ORTHO05D009897 1.0e-26 123.6 105 61.0
QL06p051907 Quercus lobata HOM05D007821 ORTHO05D009897 1.7e-26 122.9 132 50.0
Cc07_g11250 Coffea canephora HOM05D007821 ORTHO05D009897 2.9e-26 122.1 112 56.2
MD02G1124300 Malus domestica HOM05D007821 ORTHO05D009897 5.0e-26 121.3 113 57.5
MD15G1238300 Malus domestica HOM05D007821 ORTHO05D009897 5.0e-26 121.3 113 58.4
Sabra05G0089000 Salix brachista HOM05D006929 ORTHO05D008646 6.5e-26 120.9 105 59.0
TAR376G1238 Trochodendron aralioides HOM05D007821 ORTHO05D009897 8.4e-26 120.6 105 56.2
FAN23G1973 Fragaria x ananassa HOM05D007821 ORTHO05D009897 1.1e-25 120.2 109 58.7
Gohir.A10G099000 Gossypium hirsutum HOM05D007821 ORTHO05D009897 1.1e-25 120.2 107 57.0
Actinidia35672 Actinidia chinensis HOM05D007821 ORTHO05D009897 1.4e-25 119.8 102 59.8
Lj4g0018241 Lotus japonicus HOM05D007821 ORTHO05D009897 9.3e-25 117.1 105 57.1
Gohir.D10G089100 Gossypium hirsutum HOM05D007821 ORTHO05D009897 1.2e-24 116.7 107 55.1
Gorai.011G098000 Gossypium raimondii HOM05D007821 ORTHO05D009897 1.2e-24 116.7 107 55.1
Ciclev10026734m.g Citrus clementina HOM05D007821 ORTHO05D009897 4.6e-24 114.8 111 54.1
Oeu039727.1 Olea europaea HOM05D007821 ORTHO05D009897 4.6e-24 114.8 137 49.6
Nn5g30827 Nelumbo nucifera HOM05D007821 ORTHO05D009897 7.9e-24 114.0 105 56.2
Phvul.003G266700 Phaseolus vulgaris HOM05D007821 ORTHO05D009897 1.3e-23 113.2 127 48.0
Glyma.02G044900 Glycine max HOM05D007821 ORTHO05D009897 2.3e-23 112.5 125 48.0
VMungo0251G0901 Vigna mungo HOM05D007821 ORTHO05D009897 2.3e-23 112.5 105 54.3
arahy.Tifrunner.gnm1.ann1.B80PS6 Arachis hypogaea HOM05D007821 ORTHO05D009897 3.0e-23 112.1 106 52.8
Glyma.16G122400 Glycine max HOM05D007821 ORTHO05D009897 3.0e-23 112.1 125 48.0
Oeu012560.1 Olea europaea HOM05D007821 ORTHO05D009897 3.9e-23 111.7 108 56.5
Psat4g102440 Pisum sativum HOM05D007821 ORTHO05D009897 8.7e-23 110.5 110 52.7
Aqoxy6G02053 Aquilegia oxysepala HOM05D007821 ORTHO05D009897 1.1e-22 110.2 123 48.0
PGR119G1098 Punica granatum HOM05D007821 ORTHO05D009897 4.3e-22 108.2 100 54.0
PSO675G1463 Papaver somniferum HOM05D007821 ORTHO05D009897 1.6e-21 106.3 109 53.2
CsaV3_6G047470 Cucumis sativus L. HOM05D007821 ORTHO05D009897 2.2e-21 105.9 113 52.2
Medtr8g075000 Medicago truncatula HOM05D007821 ORTHO05D009897 2.8e-21 105.5 125 48.0
Medtr8g075080 Medicago truncatula HOM05D007821 ORTHO05D009897 1.4e-20 103.2 125 47.2
MELO3C033032.2 Cucumis melo HOM05D007821 ORTHO05D009897 1.5e-19 99.8 113 49.6
CANSAT01G0454 Cannabis sativa HOM05D007821 ORTHO05D009897 1.7e-18 96.3 144 42.4
arahy.Tifrunner.gnm1.ann1.F8FFU1 Arachis hypogaea HOM05D007821 ORTHO05D009897 2.2e-18 95.9 107 47.7
GSVIVG01006893001 Vitis vinifera HOM05D007821 ORTHO05D009897 6.5e-18 94.4 93 53.8
Sed0025726 Sechium edule HOM05D007821 ORTHO05D009897 1.1e-17 93.6 115 47.0
TPR.G19477 Trifolium pratense HOM05D006929 ORTHO05D008646 4.2e-17 91.7 158 36.7
PSO541G0785 Papaver somniferum HOM05D007821 ORTHO05D009897 9.4e-17 90.5 109 49.5
EL10Ac6g13327 Beta vulgaris HOM05D007821 ORTHO05D009897 3.6e-16 88.6 109 47.7
Lalb_Chr09g0334261 Lupinus albus HOM05D007821 ORTHO05D009897 4.6e-16 88.2 78 55.1
Eucgr.I02312 Eucalyptus grandis HOM05D007821 ORTHO05D009897 1.0e-15 87.0 110 44.5
AUR62026417 Chenopodium quinoa HOM05D007821 ORTHO05D009897 4.8e-13 78.2 92 47.8
FAN26G1107 Fragaria x ananassa HOM05D007821 ORTHO05D009897 8.2e-13 77.4 74 55.4
AUR62026232 Chenopodium quinoa HOM05D007821 ORTHO05D009897 1.1e-12 77.0 93 49.5
Atru.chr3.889 Acer truncatum HOM05D007821 ORTHO05D009897 1.8e-12 76.3 105 41.9
Atru.chr3.899 Acer truncatum HOM05D007821 ORTHO05D009897 1.8e-12 76.3 105 41.9
ECA246G2630 Erigeron canadensis HOM05D007821 ORTHO05D009897 2.0e-11 72.8 114 40.4
Aa31sc1371G20 Aethionema arabicum HOM05D007821 ORTHO05D009897 4.5e-11 71.6 99 42.4
HanXRQChr15g0484781 Helianthus annuus HOM05D007821 ORTHO05D009897 2.2e-10 69.3 133 36.1
C01p29170 Brassica napus HOM05D007821 ORTHO05D009897 5.0e-10 68.2 77 46.8
Sp5g10860 Schrenkiella parvula HOM05D007821 ORTHO05D009897 5.0e-10 68.2 91 41.8
BolC1t02847H Brassica oleracea HOM05D007821 ORTHO05D009897 1.4e-09 66.6 77 46.8
Carub.0005s1774 Capsella rubella HOM05D007821 ORTHO05D009897 2.5e-09 65.9 90 38.9
A01p23500 Brassica napus HOM05D007821 ORTHO05D009897 7.2e-09 64.3 77 42.9
C08p26640 Brassica napus HOM05D007821 ORTHO05D009897 7.2e-09 64.3 91 39.6
BraA01t02257Z Brassica rapa HOM05D007821 ORTHO05D009897 7.2e-09 64.3 77 42.9
BolC8t50278H Brassica oleracea HOM05D007821 ORTHO05D009897 1.6e-08 63.2 79 44.3
A09p44430 Brassica napus HOM05D007821 ORTHO05D009897 2.7e-08 62.4 79 43.0
BraA09t39902Z Brassica rapa HOM05D007821 ORTHO05D009897 2.7e-08 62.4 79 43.0
C07p46290 Brassica napus HOM05D007821 ORTHO05D009897 7.9e-08 60.8 80 41.2
AL5G31800 Arabidopsis lyrata HOM05D007821 ORTHO05D009897 1.4e-07 60.1 91 37.4
SEGI_40728 Sequoiadendron giganteum HOM05D001188 ORTHO05D001032 1.8e-07 59.7 100 39.0
ATR1125G036 Amborella trichopoda HOM05D001188 ORTHO05D001032 1.5e-06 56.6 136 31.6
TAR374G1010 Trochodendron aralioides HOM05D001188 ORTHO05D001032 2.0e-06 56.2 116 34.5
SGA_v2.0_scaffold36G14537 Striga asiatica HOM05D001188 ORTHO05D001032 2.6e-06 55.8 86 39.5
CAN.G610.80 Capsicum annuum HOM05D001188 ORTHO05D001032 3.3e-06 55.5 119 33.6
Lj9A426G57 Lonicera japonica HOM05D001188 ORTHO05D001032 3.3e-06 55.5 103 35.0
Glyma.20G116000 Glycine max HOM05D001188 ORTHO05D001032 4.4e-06 55.1 119 33.6
VMungo0464G1955 Vigna mungo HOM05D001188 ORTHO05D001032 4.4e-06 55.1 100 32.0
Hund20797 Selenicereus undatus HOM05D001188 ORTHO05D001032 5.7e-06 54.7 112 33.0
Sabra15G0070500 Salix brachista HOM05D001188 ORTHO05D001032 9.7e-06 53.9 97 40.2
Sabra15G0074500 Salix brachista HOM05D001188 ORTHO05D001032 9.7e-06 53.9 95 40.0


User provided reference genes

Program Settings