Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G890.13 Capsicum annuum HOM05D007035 ORTHO05D008774 1.5e-118 429.5 205 100.0
PGSC0003DMG400001578 Solanum tuberosum HOM05D007035 ORTHO05D008774 1.5e-107 392.9 205 91.7
Solyc02g083180.4 Solanum lycopersicum HOM05D007035 ORTHO05D008774 2.2e-106 389.0 205 91.2
Sopen02g027940 Solanum pennellii HOM05D007035 ORTHO05D008774 2.2e-106 389.0 205 91.2
Nitab4.5_0001696g0080 Nicotiana tabacum HOM05D007035 ORTHO05D008774 2.4e-105 385.6 204 89.2
Actinidia17600 Actinidia chinensis HOM05D007035 ORTHO05D008774 1.8e-92 342.8 205 77.1
CSS0018213 Camellia sinensis var. sinensis HOM05D007035 ORTHO05D008774 6.9e-92 340.9 205 77.1
Hma1.2p1_0315F.1_g122740 Hydrangea macrophylla HOM05D007035 ORTHO05D008774 8.9e-92 340.5 203 77.3
Thecc.01G009700 Theobroma cacao HOM05D007035 ORTHO05D008774 3.4e-91 338.6 204 77.5
Cfa015701 Carpinus fangiana HOM05D007035 ORTHO05D008774 4.9e-90 334.7 203 74.9
Rhsim08G0078500 Rhododendron simsii HOM05D007035 ORTHO05D008774 4.9e-90 334.7 203 76.4
vmacro18445 Vaccinium macrocarpon HOM05D007035 ORTHO05D008774 1.4e-89 333.2 203 76.4
CiPaw.07G005600 Carya illinoinensis HOM05D007035 ORTHO05D008774 3.2e-89 332.0 204 75.0
FvH4_1g10900 Fragaria vesca HOM05D007035 ORTHO05D008774 4.2e-89 331.6 204 73.0
Peaxi162Scf00300g00123 Petunia axillaris HOM05D007035 ORTHO05D008774 4.2e-89 331.6 175 89.1
Prupe.7G176600 Prunus persica HOM05D007035 ORTHO05D008774 5.4e-89 331.3 204 74.5
Atru.chr3.931 Acer truncatum HOM05D007035 ORTHO05D008774 7.1e-89 330.9 205 76.1
FAN26G0170 Fragaria x ananassa HOM05D007035 ORTHO05D008774 9.3e-89 330.5 204 73.0
Gohir.A02G175400 Gossypium hirsutum HOM05D007035 ORTHO05D008774 1.2e-88 330.1 204 73.0
MD02G1242600 Malus domestica HOM05D007035 ORTHO05D008774 1.2e-88 330.1 204 74.0
FAN19G1923 Fragaria x ananassa HOM05D007035 ORTHO05D008774 1.6e-88 329.7 204 72.5
FAN28G2890 Fragaria x ananassa HOM05D007035 ORTHO05D008774 1.6e-88 329.7 204 72.5
Gorai.003G004700 Gossypium raimondii HOM05D007035 ORTHO05D008774 2.7e-88 328.9 204 72.5
Gohir.D03G004400 Gossypium hirsutum HOM05D007035 ORTHO05D008774 3.5e-88 328.6 204 72.5
QL06p052348 Quercus lobata HOM05D007035 ORTHO05D008774 4.6e-88 328.2 204 72.5
Oeu008100.1 Olea europaea HOM05D007035 ORTHO05D008774 1.7e-87 326.2 205 72.7
FAN23G2784 Fragaria x ananassa HOM05D007035 ORTHO05D008774 3.0e-87 325.5 204 72.1
Manes.02G111400 Manihot esculenta HOM05D007035 ORTHO05D008774 3.0e-87 325.5 204 72.5
PGR102G2581 Punica granatum HOM05D007035 ORTHO05D008774 8.7e-87 323.9 204 70.6
Ciclev10026505m.g Citrus clementina HOM05D007035 ORTHO05D008774 2.5e-86 322.4 204 72.5
Ca_03644_v3 Cicer arietinum L. HOM05D007035 ORTHO05D008774 3.6e-85 318.5 204 69.1
Lalb_Chr05g0229721 Lupinus albus HOM05D007035 ORTHO05D008774 4.8e-85 318.2 204 70.6
Cc07_g12370 Coffea canephora HOM05D007035 ORTHO05D008774 6.2e-85 317.8 203 71.4
HanXRQChr07g0192541 Helianthus annuus HOM05D007035 ORTHO05D008774 6.2e-85 317.8 204 69.6
Lsat_1_v5_gn_2_75101 Lactuca sativa HOM05D007035 ORTHO05D008774 6.2e-85 317.8 204 69.6
Psat4g103040 Pisum sativum HOM05D007035 ORTHO05D008774 8.1e-85 317.4 204 69.6
Lj4g0012539 Lotus japonicus HOM05D007035 ORTHO05D008774 1.8e-84 316.2 204 68.6
Phvul.003G267600 Phaseolus vulgaris HOM05D007035 ORTHO05D008774 3.1e-84 315.5 204 68.6
Medtr8g074720 Medicago truncatula HOM05D007035 ORTHO05D008774 4.0e-84 315.1 204 68.6
MELO3C007951.2 Cucumis melo HOM05D007035 ORTHO05D008774 1.5e-83 313.2 203 68.0
Eucgr.J02513 Eucalyptus grandis HOM05D007035 ORTHO05D008774 2.6e-83 312.4 208 70.7
ClCG01G020680 Citrullus lanatus HOM05D007035 ORTHO05D008774 3.4e-83 312.0 204 68.1
Potri.005G105500 Populus trichocarpa HOM05D007035 ORTHO05D008774 3.4e-83 312.0 203 70.0
TWI59G1021 Tripterygium wilfordii HOM05D007035 ORTHO05D008774 3.4e-83 312.0 203 70.4
GSVIVG01006258001 Vitis vinifera HOM05D007035 ORTHO05D008774 3.4e-83 312.0 205 69.8
CsaV3_6G047600 Cucumis sativus L. HOM05D007035 ORTHO05D008774 1.7e-82 309.7 204 67.6
TPR.G32013 Trifolium pratense HOM05D007035 ORTHO05D008774 6.4e-82 307.8 194 70.1
TAR628G1604 Trochodendron aralioides HOM05D007035 ORTHO05D008774 6.4e-82 307.8 203 69.0
Ah.10g032510 Amaranthus hybridus HOM05D007035 ORTHO05D008774 1.9e-81 306.2 204 66.7
THA.LOC104807437 Tarenaya hassleriana HOM05D007035 ORTHO05D008774 1.9e-81 306.2 204 67.6
Sed0013381 Sechium edule HOM05D007035 ORTHO05D008774 3.2e-81 305.4 204 66.2
Migut.L00741 Erythranthe guttata HOM05D007035 ORTHO05D008774 1.2e-80 303.5 204 69.1
EL10Ac9g22991 Beta vulgaris HOM05D007035 ORTHO05D008774 2.1e-80 302.8 205 68.8
CANSAT25G1910 Cannabis sativa HOM05D007035 ORTHO05D008774 2.7e-80 302.4 206 69.9
A06p33710 Brassica napus HOM05D007035 ORTHO05D008774 4.6e-80 301.6 204 65.2
BcaB08g34751 Brassica carinata HOM05D007035 ORTHO05D008774 7.9e-80 300.8 203 66.5
BraA06t26305Z Brassica rapa HOM05D007035 ORTHO05D008774 7.9e-80 300.8 204 65.7
AL3G50680 Arabidopsis lyrata HOM05D007035 ORTHO05D008774 1.3e-79 300.1 204 65.7
Lj4A228G16 Lonicera japonica HOM05D007035 ORTHO05D008774 1.8e-79 299.7 184 75.0
SGA_v2.0_scaffold229G43297 Striga asiatica HOM05D001343 ORTHO05D002008 1.8e-79 299.7 203 68.0
Carub.0003s3179 Capsella rubella HOM05D007035 ORTHO05D008774 3.0e-79 298.9 204 65.2
Nn6g31845 Nelumbo nucifera HOM05D007035 ORTHO05D008774 3.0e-79 298.9 204 67.2
AT2G17695 Arabidopsis thaliana HOM05D007035 ORTHO05D008774 3.9e-79 298.5 204 64.7
C03p58600 Brassica napus HOM05D007035 ORTHO05D008774 3.9e-79 298.5 204 64.7
Sp3g31080 Schrenkiella parvula HOM05D007035 ORTHO05D008774 5.1e-79 298.1 204 65.2
Thhalv10022849m.g Eutrema salsugineum HOM05D007035 ORTHO05D008774 6.7e-79 297.7 203 65.5
SalBow5G2770 Salvia bowleyana HOM05D007035 ORTHO05D008774 1.9e-78 296.2 204 67.2
BcaC01g02899 Brassica carinata HOM05D007035 ORTHO05D008774 2.5e-78 295.8 204 64.7
BolC3t18121H Brassica oleracea HOM05D007035 ORTHO05D008774 2.5e-78 295.8 204 64.7
DCAR_027629 Daucus carota HOM05D007035 ORTHO05D008774 3.3e-78 295.4 201 65.7
arahy.Tifrunner.gnm1.ann1.JN68AD Arachis hypogaea HOM05D007035 ORTHO05D008774 1.4e-76 290.0 205 65.9
arahy.Tifrunner.gnm1.ann1.Y2NACG Arachis hypogaea HOM05D007035 ORTHO05D008774 1.4e-76 290.0 205 65.9
COL.COLO4_22513 Corchorus olitorius HOM05D007035 ORTHO05D008774 2.0e-75 286.2 202 67.3
unitig_88.g27771 Utricularia gibba HOM05D007035 ORTHO05D008774 1.9e-73 279.6 205 63.9
VMungo0251G2208 Vigna mungo HOM05D007035 ORTHO05D008774 7.1e-73 277.7 182 68.7
Hund08627 Selenicereus undatus HOM05D007035 ORTHO05D008774 2.1e-72 276.2 176 69.9
PSO675G7652 Papaver somniferum HOM05D007035 ORTHO05D008774 2.3e-71 272.7 206 63.6
MBI05_g35104_MAGBIO Magnolia biondii HOM05D007035 ORTHO05D008774 3.0e-71 272.3 211 63.0
PSO541G4772 Papaver somniferum HOM05D007035 ORTHO05D008774 5.1e-71 271.6 206 63.6
CDE09G0622 Ceratophyllum demersum HOM05D007035 ORTHO05D008774 6.7e-71 271.2 204 63.7
QL06p052340 Quercus lobata HOM05D007035 ORTHO05D008774 1.3e-69 266.9 164 72.6
ECA238G0027 Erigeron canadensis HOM05D007035 ORTHO05D008774 4.0e-68 261.9 185 64.9
Aa31LG8G14960 Aethionema arabicum HOM05D000088 ORTHO05D000933 1.5e-67 260.0 183 65.0
Glyma.16G120900 Glycine max HOM05D007035 ORTHO05D008774 2.5e-65 252.7 161 70.8
RcHm_v2.0_Chr2g0098161 Rosa chinensis HOM05D007035 ORTHO05D008774 2.1e-64 249.6 165 67.9
AUR62032933 Chenopodium quinoa HOM05D007035 ORTHO05D008774 3.9e-63 245.4 163 69.3
MSTRG.15590 Avicennia marina HOM05D007035 ORTHO05D008774 2.5e-62 242.7 161 69.6
Dinv40155 Davidia involucrata HOM05D002155 ORTHO05D002215 4.3e-62 241.9 145 74.5
Os03g0107600 Oryza sativa ssp. japonica HOM05D007035 ORTHO05D008774 5.7e-62 241.5 215 53.5
Os04g0119300 Oryza sativa ssp. japonica HOM05D007035 ORTHO05D008774 5.7e-62 241.5 215 53.5
HPP92_014997 Vanilla planifolia HOM05D007035 ORTHO05D008774 1.3e-61 240.4 207 54.6
Zm00001eb241510 Zea mays HOM05D007035 ORTHO05D008774 1.0e-58 230.7 215 52.1
ATR0661G057 Amborella trichopoda HOM05D007035 ORTHO05D008774 2.2e-58 229.6 186 58.6
Cpa.g.sc6.337 Carica papaya HOM05D007035 ORTHO05D008774 1.9e-57 226.5 146 69.2
Pp3c1_37080 Physcomitrium patens HOM05D007035 ORTHO05D008774 3.0e-55 219.2 212 50.9
Sc20g0005390 Simmondsia chinensis HOM05D007035 ORTHO05D008774 2.5e-54 216.1 149 65.1
Duzib147G1308 Durio zibethinus HOM05D007035 ORTHO05D008774 2.0e-51 206.5 168 59.5
AL3G27500 Arabidopsis lyrata HOM05D007035 ORTHO05D008774 5.9e-51 204.9 146 59.6
Aqoxy6G01870 Aquilegia oxysepala HOM05D007035 ORTHO05D008774 7.2e-49 198.0 148 61.5
AUR62017739 Chenopodium quinoa HOM05D007035 ORTHO05D008774 1.2e-48 197.2 122 74.6
Mapoly0027s0184 Marchantia polymorpha HOM05D007035 ORTHO05D008774 2.7e-48 196.1 214 46.3
CARHR107960 Cardamine hirsuta HOM05D007035 ORTHO05D008774 8.8e-47 191.0 121 68.6
Prupe.1G268600 Prunus persica HOM05D007035 ORTHO05D008774 6.7e-39 164.9 106 67.9
Prupe.6G001100 Prunus persica HOM05D007035 ORTHO05D008774 2.6e-38 162.9 106 67.0
SMO364G0252 Selaginella moellendorffii HOM05D007035 ORTHO05D008774 7.0e-36 154.8 156 48.7
Eucgr.J01132 Eucalyptus grandis HOM05D007035 ORTHO05D008774 4.5e-35 152.1 145 53.8
SEGI_40855 Sequoiadendron giganteum HOM05D007035 ORTHO05D008774 2.5e-33 146.4 168 42.9
AagrBONN_evm.TU.Sc2ySwM_117.3401 Anthoceros agrestis HOM05D007035 ORTHO05D008774 3.6e-32 142.5 156 46.2
Cre17.g720550 Chlamydomonas reinhardtii HOM05D007035 ORTHO05D008774 6.3e-29 131.7 209 34.9
PRCOL_00002518 Prasinoderma coloniale HOM05D007035 ORTHO05D008774 2.7e-27 126.3 174 37.9
CBR_g48433 Chara braunii HOM05D007035 ORTHO05D008774 1.2e-24 117.5 277 27.4
RcHm_v2.0_Chr5g0036401 Rosa chinensis HOM05D007035 ORTHO05D008774 1.8e-23 113.6 114 50.0
MCO10G322 Micromonas commoda HOM05D007035 ORTHO05D008774 8.8e-23 111.3 167 34.7
Peaxi162Scf00300g00119 Petunia axillaris HOM05D007035 ORTHO05D008774 3.7e-21 105.9 62 79.0
Cpa.g.sc6.336 Carica papaya HOM05D007035 ORTHO05D008774 1.5e-17 94.0 59 72.9
RcHm_v2.0_Chr5g0036471 Rosa chinensis HOM05D007035 ORTHO05D008774 4.1e-12 75.9 63 52.4


User provided reference genes

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