Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G883.7 Capsicum annuum HOM05D008006 ORTHO05D010181 2.5e-175 618.6 304 100.0
Nitab4.5_0000443g0190 Nicotiana tabacum HOM05D008006 ORTHO05D010181 4.0e-157 558.1 312 87.5
Sopen02g017480 Solanum pennellii HOM05D008006 ORTHO05D010181 6.9e-157 557.4 314 86.9
PGSC0003DMG401009429 Solanum tuberosum HOM05D008006 ORTHO05D010181 2.0e-156 555.8 314 87.3
Nitab4.5_0000973g0020 Nicotiana tabacum HOM05D008006 ORTHO05D010181 8.4e-155 550.4 312 86.5
Peaxi162Scf00981g00002 Petunia axillaris HOM05D008006 ORTHO05D010181 5.1e-144 514.6 309 82.2
Oeu023348.1 Olea europaea HOM05D008006 ORTHO05D010181 6.1e-113 411.4 304 66.8
Cc07_g12390 Coffea canephora HOM05D008006 ORTHO05D010181 1.3e-107 393.7 311 61.7
Hma1.2p1_0085F.1_g044170 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 1.7e-107 393.3 319 63.3
MSTRG.3655 Avicennia marina HOM05D008006 ORTHO05D010181 3.3e-106 389.0 279 68.8
Migut.K01160 Erythranthe guttata HOM05D008006 ORTHO05D010181 9.5e-106 387.5 280 70.4
Dinv19107 Davidia involucrata HOM05D008006 ORTHO05D007530 1.2e-103 380.6 304 62.8
Lsat_1_v5_gn_8_113701 Lactuca sativa HOM05D008006 ORTHO05D010181 4.9e-102 375.2 286 64.7
DCAR_005377 Daucus carota HOM05D008006 ORTHO05D010181 4.5e-100 368.6 296 63.5
SGA_v2.0_scaffold229G43287 Striga asiatica HOM05D008006 ORTHO05D010181 2.8e-97 359.4 302 61.6
unitig_0.g2635 Utricularia gibba HOM05D008006 ORTHO05D010181 2.6e-95 352.8 282 60.3
TAR376G0197 Trochodendron aralioides HOM05D008006 ORTHO05D010181 7.5e-95 351.3 304 60.5
MD15G1157700 Malus domestica HOM05D008006 ORTHO05D010181 7.0e-93 344.7 271 62.7
MBI04_g23901_MAGBIO Magnolia biondii HOM05D008006 ORTHO05D010181 1.0e-91 340.9 277 61.0
MELO3C010256.2 Cucumis melo HOM05D008006 ORTHO05D010181 3.0e-91 339.3 297 57.2
ClCG06G012090 Citrullus lanatus HOM05D008006 ORTHO05D010181 8.6e-91 337.8 297 57.6
CsaV3_1G028580 Cucumis sativus L. HOM05D008006 ORTHO05D010181 8.6e-91 337.8 275 61.1
Sed0023235 Sechium edule HOM05D008006 ORTHO05D010181 8.6e-91 337.8 275 62.5
Aqoxy6G02620 Aquilegia oxysepala HOM05D008006 ORTHO05D010181 2.5e-90 336.3 300 61.0
CSS0020571 Camellia sinensis var. sinensis HOM05D008006 ORTHO05D010181 2.5e-90 336.3 311 57.9
CANSAT11G1793 Cannabis sativa HOM05D008006 ORTHO05D010181 2.5e-90 336.3 273 59.3
Prupe.7G252900 Prunus persica HOM05D008006 ORTHO05D010181 2.5e-90 336.3 272 61.0
Gohir.A06G096100 Gossypium hirsutum HOM05D008006 ORTHO05D010181 1.2e-89 334.0 297 58.2
CDE07G0801 Ceratophyllum demersum HOM05D008006 ORTHO05D010181 1.6e-89 333.6 284 57.0
COL.COLO4_22070 Corchorus olitorius HOM05D008006 ORTHO05D010181 6.2e-89 331.6 291 59.1
Phvul.009G208600 Phaseolus vulgaris HOM05D008006 ORTHO05D010181 8.0e-89 331.3 274 59.9
Gorai.010G110900 Gossypium raimondii HOM05D008006 ORTHO05D010181 1.4e-88 330.5 280 59.6
Duzib187G1563 Durio zibethinus HOM05D008006 ORTHO05D010181 3.1e-88 329.3 285 59.6
Cfa020870 Carpinus fangiana HOM05D008006 ORTHO05D010181 4.0e-88 328.9 291 59.1
Manes.14G140100 Manihot esculenta HOM05D008006 ORTHO05D010181 6.8e-88 328.2 272 61.0
Haze_19299 Corylus avellana HOM05D008006 ORTHO05D010181 2.0e-87 326.6 291 59.5
Medtr1g052525 Medicago truncatula HOM05D008006 ORTHO05D010181 2.6e-87 326.2 275 57.1
Cpa.g.sc46.96 Carica papaya HOM05D008006 ORTHO05D010181 1.3e-86 323.9 299 54.5
Potri.018G112900 Populus trichocarpa HOM05D008006 ORTHO05D010181 2.2e-86 323.2 280 59.6
CiPaw.15G179000 Carya illinoinensis HOM05D008006 ORTHO05D010181 2.9e-86 322.8 284 59.9
QL02p091617 Quercus lobata HOM05D008006 ORTHO05D010181 1.4e-85 320.5 309 54.0
VMungo1309G1328 Vigna mungo HOM05D008006 ORTHO05D010181 1.9e-85 320.1 268 59.3
RcHm_v2.0_Chr2g0086431 Rosa chinensis HOM05D008006 ORTHO05D010181 5.4e-85 318.5 270 61.1
Sabra18G0096000 Salix brachista HOM05D008006 ORTHO05D010181 1.2e-84 317.4 280 58.6
SalBow5G3372 Salvia bowleyana HOM05D008006 ORTHO05D010181 3.9e-83 312.4 297 57.9
PGR142G2664 Punica granatum HOM05D008006 ORTHO05D010181 2.5e-82 309.7 281 56.2
Sc03g0006000 Simmondsia chinensis HOM05D008006 ORTHO05D010181 4.3e-82 308.9 288 53.8
Thecc.09G037000 Theobroma cacao HOM05D008006 ORTHO05D010181 5.6e-82 308.5 285 55.8
EL10Ac6g14724 Beta vulgaris HOM05D008006 ORTHO05D010181 9.5e-82 307.8 274 58.0
FvH4_1g01510 Fragaria vesca HOM05D008006 ORTHO05D010181 4.0e-80 302.4 271 57.9
FAN28G2644 Fragaria x ananassa HOM05D008006 ORTHO05D010181 4.0e-80 302.4 271 57.9
THA.LOC104827422 Tarenaya hassleriana HOM05D008006 ORTHO05D010181 2.2e-78 296.6 286 51.7
Ah.07g202950 Amaranthus hybridus HOM05D008006 ORTHO05D010181 2.9e-78 296.2 276 57.2
QL02p091673 Quercus lobata HOM05D008006 ORTHO05D010181 3.7e-78 295.8 286 53.5
AUR62016258 Chenopodium quinoa HOM05D008006 ORTHO05D010181 1.2e-76 290.8 246 60.6
FAN23G1450 Fragaria x ananassa HOM05D008006 ORTHO05D010181 4.6e-76 288.9 271 55.4
SEGI_07410 Sequoiadendron giganteum HOM05D008006 ORTHO05D010181 6.0e-76 288.5 287 53.0
Solyc02g068350.1 Solanum lycopersicum HOM05D008006 ORTHO05D010181 2.3e-75 286.6 172 81.4
HPP92_022771 Vanilla planifolia HOM05D008006 ORTHO05D010181 3.3e-74 282.7 283 53.0
ATR0605G334 Amborella trichopoda HOM05D008006 ORTHO05D010181 9.9e-71 271.2 299 50.2
Zm00001eb102080 Zea mays HOM05D008006 ORTHO05D010181 1.9e-66 256.9 274 51.8
Actinidia28771 Actinidia chinensis HOM05D008006 ORTHO05D010181 4.8e-65 252.3 206 60.2
Gohir.D06G096200 Gossypium hirsutum HOM05D008006 ORTHO05D010181 3.2e-61 239.6 211 56.9
Mapoly0054s0065 Marchantia polymorpha HOM05D008006 ORTHO05D010181 4.2e-61 239.2 276 47.8
HanXRQChr15g0486431 Helianthus annuus HOM05D008006 ORTHO05D010181 6.7e-51 205.3 164 59.8
AUR62003323 Chenopodium quinoa HOM05D002832 ORTHO05D007530 1.0e-43 181.4 134 64.9
Lalb_Chr11g0072821 Lupinus albus HOM05D008006 ORTHO05D010181 1.6e-41 174.1 118 72.0
SMO364G0826 Selaginella moellendorffii HOM05D008006 ORTHO05D010181 1.8e-32 144.1 185 45.4
Cre16.g675000 Chlamydomonas reinhardtii HOM05D008006 ORTHO05D010181 2.0e-23 114.0 306 35.0
AUR62043755 Chenopodium quinoa HOM05D008006 ORTHO05D010181 5.9e-23 112.5 82 65.9
CBR_g4365 Chara braunii HOM05D008006 ORTHO05D010181 3.6e-20 103.2 117 48.7
FAN26G1902 Fragaria x ananassa HOM05D008006 ORTHO05D010181 1.3e-17 94.7 113 46.0
Oeu046642.1 Olea europaea HOM05D008006 ORTHO05D010181 1.2e-15 88.2 103 47.6
Hma1.2p1_2924F.1_g330380 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 4.7e-12 76.3 44 68.2


User provided reference genes

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