Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G883.23 Capsicum annuum HOM05D006398 ORTHO05D007983 1.2e-96 356.7 200 100.0
PGSC0003DMG400009426 Solanum tuberosum HOM05D006398 ORTHO05D007983 1.4e-52 210.3 153 73.2
Nitab4.5_0011544g0020 Nicotiana tabacum HOM05D006398 ORTHO05D007983 1.5e-51 206.8 150 74.7
Nitab4.5_0012518g0010 Nicotiana tabacum HOM05D006398 ORTHO05D007983 2.2e-50 203.0 148 73.6
Solyc02g068290.2 Solanum lycopersicum HOM05D006398 ORTHO05D007983 2.8e-50 202.6 148 73.6
Sopen02g017390 Solanum pennellii HOM05D006398 ORTHO05D007983 1.1e-49 200.7 148 73.0
Peaxi162Scf00981g00021 Petunia axillaris HOM05D006398 ORTHO05D007983 6.5e-47 191.4 143 76.9
Dinv24399 Davidia involucrata HOM05D006398 ORTHO05D007983 4.0e-28 129.0 147 53.7
Dinv28289 Davidia involucrata HOM05D006398 ORTHO05D007983 6.8e-28 128.3 146 53.4
Dinv19113 Davidia involucrata HOM05D006398 ORTHO05D007983 7.5e-27 124.8 150 52.7
Actinidia28761 Actinidia chinensis HOM05D006398 ORTHO05D007983 1.7e-26 123.6 159 57.2
Lj4P245T44 Lonicera japonica HOM05D006398 ORTHO05D007983 4.9e-26 122.1 141 53.9
Oeu000786.1 Olea europaea HOM05D006398 ORTHO05D007983 1.4e-25 120.6 149 57.0
SalBow3G3387 Salvia bowleyana HOM05D006398 ORTHO05D007983 1.4e-25 120.6 149 51.0
Ciclev10026700m.g Citrus clementina HOM05D006398 ORTHO05D007983 2.4e-25 119.8 146 63.7
Gohir.D07G081300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 2.4e-25 119.8 145 60.7
Thecc.04G122700 Theobroma cacao HOM05D006398 ORTHO05D007983 5.4e-25 118.6 146 52.1
Duzib133G0235 Durio zibethinus HOM05D006398 ORTHO05D007983 7.0e-25 118.2 145 61.4
Gorai.001G086400 Gossypium raimondii HOM05D006398 ORTHO05D007983 1.6e-24 117.1 145 59.3
Hma1.2p1_0085F.1_g044270 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 2.0e-24 116.7 146 51.4
COL.COLO4_15698 Corchorus olitorius HOM05D006398 ORTHO05D007983 7.8e-24 114.8 143 54.5
CSS0046434 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 1.0e-23 114.4 138 52.2
Gohir.A07G076575 Gossypium hirsutum HOM05D006398 ORTHO05D007983 3.9e-23 112.5 145 56.6
CSS0002146 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 5.0e-23 112.1 138 51.4
vmacro20410 Vaccinium macrocarpon HOM05D006398 ORTHO05D007983 8.6e-23 111.3 136 52.2
Lj2g0016631 Lotus japonicus HOM05D006398 ORTHO05D007983 1.1e-22 110.9 145 55.2
Prupe.7G188600 Prunus persica HOM05D006398 ORTHO05D007983 1.5e-22 110.5 136 51.5
CiPaw.03G212200 Carya illinoinensis HOM05D006398 ORTHO05D007983 5.6e-22 108.6 145 57.9
QL06p053503 Quercus lobata HOM05D006398 ORTHO05D007983 9.5e-22 107.8 145 53.8
TAR381G1497 Trochodendron aralioides HOM05D006398 ORTHO05D007983 1.2e-21 107.5 147 46.3
Cfa011161 Carpinus fangiana HOM05D006398 ORTHO05D007983 2.1e-21 106.7 156 50.6
FvH4_1g09810 Fragaria vesca HOM05D006398 ORTHO05D007983 2.1e-21 106.7 145 44.8
FAN19G1193 Fragaria x ananassa HOM05D006398 ORTHO05D007983 2.1e-21 106.7 145 44.8
Gohir.D11G173600 Gossypium hirsutum HOM05D006398 ORTHO05D007983 2.1e-21 106.7 136 58.1
Gorai.007G185900 Gossypium raimondii HOM05D006398 ORTHO05D007983 2.1e-21 106.7 136 58.1
Oeu024785.2 Olea europaea HOM05D006398 ORTHO05D007983 2.8e-21 106.3 144 46.5
Nn6g31587 Nelumbo nucifera HOM05D006398 ORTHO05D007983 3.6e-21 105.9 149 48.3
TAR376G1029 Trochodendron aralioides HOM05D006398 ORTHO05D007983 3.6e-21 105.9 139 47.5
Gohir.A11G167300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 6.2e-21 105.1 136 57.4
FAN23G0152 Fragaria x ananassa HOM05D006398 ORTHO05D007983 1.8e-20 103.6 145 44.8
FAN26G0304 Fragaria x ananassa HOM05D006398 ORTHO05D007983 5.2e-20 102.1 145 44.8
Rhsim10G0190200 Rhododendron simsii HOM05D006398 ORTHO05D007983 1.2e-19 100.9 113 52.2
RcHm_v2.0_Chr2g0096641 Rosa chinensis HOM05D006398 ORTHO05D007983 1.5e-19 100.5 145 52.4
Ca_25041_v3 Cicer arietinum L. HOM05D006398 ORTHO05D007983 2.0e-19 100.1 144 47.9
Atru.chr3.7 Acer truncatum HOM05D006398 ORTHO05D007983 2.6e-19 99.8 146 49.3
Medtr5g025015 Medicago truncatula HOM05D006398 ORTHO05D007983 5.8e-19 98.6 144 47.2
CANSAT56G1034 Cannabis sativa HOM05D006398 ORTHO05D007983 7.5e-19 98.2 137 56.2
Cfa007121 Carpinus fangiana HOM05D006398 ORTHO05D007983 9.9e-19 97.8 145 55.9
Lalb_Chr16g0380261 Lupinus albus HOM05D006398 ORTHO05D007983 1.3e-18 97.4 144 52.1
PSO017G0885 Papaver somniferum HOM05D006398 ORTHO05D007983 2.2e-18 96.7 171 38.6
MSTRG.19082 Avicennia marina HOM05D006398 ORTHO05D007983 2.9e-18 96.3 149 45.0
DCAR_014127 Daucus carota HOM05D006398 ORTHO05D007983 3.7e-18 95.9 143 47.6
Manes.01G158600 Manihot esculenta HOM05D006398 ORTHO05D007983 4.9e-18 95.5 151 41.7
FAN28G0584 Fragaria x ananassa HOM05D006398 ORTHO05D007983 6.4e-18 95.1 145 46.2
Eucgr.J02575 Eucalyptus grandis HOM05D006398 ORTHO05D007983 1.4e-17 94.0 143 54.5
MBI04_g11522_MAGBIO Magnolia biondii HOM05D006398 ORTHO05D007983 1.4e-17 94.0 144 47.2
Aqoxy5G00947 Aquilegia oxysepala HOM05D006398 ORTHO05D007983 1.9e-17 93.6 139 51.1
PSO017G7180 Papaver somniferum HOM05D006398 ORTHO05D007983 1.9e-17 93.6 148 43.9
TPR.G33762 Trifolium pratense HOM05D006398 ORTHO05D007983 3.2e-17 92.8 144 45.1
Manes.02G117704 Manihot esculenta HOM05D006398 ORTHO05D007983 7.1e-17 91.7 146 42.5
MD15G1226600 Malus domestica HOM05D006398 ORTHO05D007983 1.2e-16 90.9 134 46.3
Psat2g147080 Pisum sativum HOM05D006398 ORTHO05D007983 7.8e-16 88.2 142 43.7
PGR119G1180 Punica granatum HOM05D006398 ORTHO05D007983 7.8e-16 88.2 146 52.1
Migut.J00328 Erythranthe guttata HOM05D006398 ORTHO05D007983 1.3e-15 87.4 149 40.9
Glyma.11G089000 Glycine max HOM05D006398 ORTHO05D007983 5.1e-15 85.5 144 52.8
PGR042G1229 Punica granatum HOM05D006398 ORTHO05D007983 5.1e-15 85.5 151 49.0
VMungo1215G0575 Vigna mungo HOM05D006398 ORTHO05D007983 3.3e-14 82.8 140 55.7
Phvul.002G119800 Phaseolus vulgaris HOM05D006398 ORTHO05D007983 5.6e-14 82.0 144 55.6
CsaV3_6G047960 Cucumis sativus L. HOM05D006398 ORTHO05D007983 1.2e-13 80.9 129 42.6
HanXRQChr10g0316121 Helianthus annuus HOM05D006398 ORTHO05D007983 1.2e-13 80.9 143 43.4
Cfa000559 Carpinus fangiana HOM05D006398 ORTHO05D007983 2.8e-13 79.7 152 38.8
Potri.011G146400 Populus trichocarpa HOM05D006398 ORTHO05D007983 2.8e-13 79.7 134 36.6
Sed0010545 Sechium edule HOM05D006398 ORTHO05D007983 3.6e-13 79.3 132 42.4
Sabra11G0131300 Salix brachista HOM05D006398 ORTHO05D007983 4.7e-13 79.0 133 36.1
MELO3C007985.2 Cucumis melo HOM05D006398 ORTHO05D007983 8.1e-13 78.2 130 43.1
Haze_03650 Corylus avellana HOM05D000071 ORTHO05D007983 1.4e-12 77.4 95 65.3
Hma1.2p1_0353F.1_g133130 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 1.8e-12 77.0 145 41.4
ECA238G1438 Erigeron canadensis HOM05D006398 ORTHO05D007983 3.1e-12 76.3 137 42.3
MD02G1107400 Malus domestica HOM05D006398 ORTHO05D007983 3.1e-12 76.3 86 52.3
TWI53G1768 Tripterygium wilfordii HOM05D006398 ORTHO05D007983 6.8e-12 75.1 140 47.9
Glyma.01G155800 Glycine max HOM05D006398 ORTHO05D007983 8.9e-12 74.7 127 51.2
SEGI_02084 Sequoiadendron giganteum HOM05D006398 ORTHO05D007983 2.0e-11 73.6 152 44.7
EL10Ac5g11754 Beta vulgaris HOM05D006398 ORTHO05D007983 2.6e-11 73.2 143 37.8
ATR0605G223 Amborella trichopoda HOM05D006398 ORTHO05D007983 3.4e-11 72.8 139 47.5
Cfa012756 Carpinus fangiana HOM05D006398 ORTHO05D007983 3.4e-11 72.8 92 60.9
Sed0016714 Sechium edule HOM05D006398 ORTHO05D007983 1.3e-10 70.9 123 52.0
Sc03g0004180 Simmondsia chinensis HOM05D006398 ORTHO05D007983 1.3e-10 70.9 144 45.8
Ah.02g115220 Amaranthus hybridus HOM05D006398 ORTHO05D007983 3.8e-10 69.3 100 42.0
Sabra16G0308300 Salix brachista HOM05D006398 ORTHO05D007983 3.8e-10 69.3 136 35.3
SGA_v2.0_scaffold126G33784 Striga asiatica HOM05D006398 ORTHO05D007983 6.4e-10 68.6 139 36.7
Lsat_1_v5_gn_2_72860 Lactuca sativa HOM05D006398 ORTHO05D007983 8.4e-10 68.2 69 50.7
TAR628G0945 Trochodendron aralioides HOM05D006398 ORTHO05D007983 1.1e-09 67.8 107 44.9
Zm00001eb236520 Zea mays HOM05D006398 ORTHO05D007983 1.4e-09 67.4 145 48.3
arahy.Tifrunner.gnm1.ann1.GQ5KDA Arachis hypogaea HOM05D006398 ORTHO05D007983 9.2e-09 64.7 50 70.0
CDE06G2001 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 3.5e-08 62.8 135 37.0
Sp5g10740 Schrenkiella parvula HOM05D006398 ORTHO05D007983 4.6e-08 62.4 109 48.6
CDE04G3216 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 7.8e-08 61.6 131 37.4
Thhalv10010838m.g Eutrema salsugineum HOM05D006398 ORTHO05D007983 1.7e-07 60.5 107 47.7
AT3G51500 Arabidopsis thaliana HOM05D006398 ORTHO05D007983 2.3e-07 60.1 99 51.5
Os02g0193500 Oryza sativa ssp. japonica HOM05D006398 ORTHO05D007983 8.7e-07 58.2 149 34.2
HPP92_018846 Vanilla planifolia HOM05D006398 ORTHO05D007983 1.1e-06 57.8 140 34.3
Lalb_Chr05g0215011 Lupinus albus HOM05D006398 ORTHO05D007983 3.3e-06 56.2 144 44.4
HPP92_018898 Vanilla planifolia HOM05D006398 ORTHO05D007983 3.3e-06 56.2 96 35.4


User provided reference genes

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