Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G880.2 Capsicum annuum HOM05D007144 ORTHO05D008709 5.2e-36 154.8 153 100.0
Sopen04g003740 Solanum pennellii HOM05D007144 ORTHO05D008709 7.3e-30 134.4 153 91.5
PGSC0003DMG400031376 Solanum tuberosum HOM05D007144 ORTHO05D008709 7.3e-30 134.4 153 91.5
Solyc04g008580.3 Solanum lycopersicum HOM05D007144 ORTHO05D008709 1.6e-29 133.3 153 92.8
Nitab4.5_0003882g0010 Nicotiana tabacum HOM05D007144 ORTHO05D008709 4.9e-26 121.7 153 87.6
Peaxi162Scf00329g00929 Petunia axillaris HOM05D007144 ORTHO05D008709 6.4e-26 121.3 153 88.9
Nitab4.5_0000129g0400 Nicotiana tabacum HOM05D007144 ORTHO05D008709 3.2e-25 119.0 153 85.0
SalBow5G2023 Salvia bowleyana HOM05D007144 ORTHO05D008709 1.5e-19 100.1 63 76.2
SalBow5G2895 Salvia bowleyana HOM05D007144 ORTHO05D008709 3.4e-19 99.0 63 74.6
EL10Ac4g10148 Beta vulgaris HOM05D007144 ORTHO05D008709 7.5e-19 97.8 72 72.2
TAR369G0480 Trochodendron aralioides HOM05D007144 ORTHO05D008709 7.5e-19 97.8 65 73.8
Actinidia06960 Actinidia chinensis HOM05D007144 ORTHO05D008709 3.7e-18 95.5 61 75.4
CSS0000717 Camellia sinensis var. sinensis HOM05D007144 ORTHO05D008709 4.9e-18 95.1 67 70.1
CiPaw.13G151300 Carya illinoinensis HOM05D007144 ORTHO05D008709 4.9e-18 95.1 72 66.7
Prupe.4G267400 Prunus persica HOM05D007144 ORTHO05D008709 6.4e-18 94.7 71 73.2
Cc11_g02820 Coffea canephora HOM05D007144 ORTHO05D008709 1.1e-17 94.0 75 64.0
COL.COLO4_35678 Corchorus olitorius HOM05D007144 ORTHO05D008709 1.1e-17 94.0 74 64.9
Ah.06g194530 Amaranthus hybridus HOM05D007144 ORTHO05D008709 1.9e-17 93.2 72 68.1
Migut.O00557 Erythranthe guttata HOM05D007144 ORTHO05D008709 1.9e-17 93.2 156 76.9
Gohir.D07G124200 Gossypium hirsutum HOM05D007144 ORTHO05D008709 1.9e-17 93.2 64 73.4
Gorai.001G134000 Gossypium raimondii HOM05D007144 ORTHO05D008709 1.9e-17 93.2 64 73.4
Ciclev10017489m.g Citrus clementina HOM05D007144 ORTHO05D008709 2.4e-17 92.8 144 78.5
Hma1.2p1_0842F.1_g227150 Hydrangea macrophylla HOM05D007144 ORTHO05D008709 2.4e-17 92.8 55 81.8
Dinv36172 Davidia involucrata HOM05D007144 ORTHO05D008709 3.2e-17 92.4 83 61.4
Atru.chr3.2764 Acer truncatum HOM05D007144 ORTHO05D008709 4.1e-17 92.0 58 77.6
Aqoxy1G00362 Aquilegia oxysepala HOM05D007144 ORTHO05D008709 4.1e-17 92.0 70 68.6
Thecc.09G249300 Theobroma cacao HOM05D007144 ORTHO05D008709 4.1e-17 92.0 72 65.3
Hund07439 Selenicereus undatus HOM05D007144 ORTHO05D008709 7.1e-17 91.3 72 63.9
Potri.009G070700 Populus trichocarpa HOM05D007144 ORTHO05D008709 9.2e-17 90.9 57 78.9
CDE04G3392 Ceratophyllum demersum HOM05D000144 ORTHO05D007336 1.6e-16 90.1 74 62.2
Sc06g0004670 Simmondsia chinensis HOM05D007144 ORTHO05D008709 1.6e-16 90.1 72 62.5
Haze_23224 Corylus avellana HOM05D007144 ORTHO05D008709 2.1e-16 89.7 64 70.3
Duzib168G0692 Durio zibethinus HOM05D007144 ORTHO05D008709 2.1e-16 89.7 72 65.3
Cpa.g.sc482.3 Carica papaya HOM05D007144 ORTHO05D008709 3.5e-16 89.0 67 68.7
Medtr3g088410 Medicago truncatula HOM05D007144 ORTHO05D008709 3.5e-16 89.0 61 72.1
AUR62006537 Chenopodium quinoa HOM05D007144 ORTHO05D008709 4.6e-16 88.6 69 68.1
Lj6g0012120 Lotus japonicus HOM05D007144 ORTHO05D008709 4.6e-16 88.6 62 72.6
Cfa010657 Carpinus fangiana HOM05D007144 ORTHO05D008709 6.0e-16 88.2 64 68.8
Ca_03986_v3 Cicer arietinum L. HOM05D007144 ORTHO05D008709 6.0e-16 88.2 61 73.8
Haze_03594 Corylus avellana HOM05D007144 ORTHO05D008709 6.0e-16 88.2 64 68.8
Potri.001G276100 Populus trichocarpa HOM05D007144 ORTHO05D008709 6.0e-16 88.2 139 76.3
SGA_v2.0_scaffold43G16444 Striga asiatica HOM05D007144 ORTHO05D008709 6.0e-16 88.2 71 64.8
Duzib150G1568 Durio zibethinus HOM05D007144 ORTHO05D008709 7.8e-16 87.8 68 64.7
HanXRQChr17g0535301 Helianthus annuus HOM05D007144 ORTHO05D008709 7.8e-16 87.8 71 64.8
Zm00001eb329760 Zea mays HOM05D007144 ORTHO05D008709 7.8e-16 87.8 60 70.0
Carub.0006s1083 Capsella rubella HOM05D007144 ORTHO05D008709 1.3e-15 87.0 72 63.9
Thhalv10014957m.g Eutrema salsugineum HOM05D007144 ORTHO05D008709 1.3e-15 87.0 56 75.0
THA.LOC104799122 Tarenaya hassleriana HOM05D007144 ORTHO05D008709 1.3e-15 87.0 60 70.0
ATR0745G069 Amborella trichopoda HOM05D007144 ORTHO05D008709 2.3e-15 86.3 62 64.5
Lsat_1_v5_gn_2_34061 Lactuca sativa HOM05D007144 ORTHO05D008709 2.3e-15 86.3 62 71.0
Sp6g31320 Schrenkiella parvula HOM05D007144 ORTHO05D008709 2.3e-15 86.3 55 76.4
AL6G23120 Arabidopsis lyrata HOM05D007144 ORTHO05D008709 3.0e-15 85.9 60 68.3
CARHR200790 Cardamine hirsuta HOM05D007144 ORTHO05D008709 3.0e-15 85.9 71 64.8
DCAR_023846 Daucus carota HOM05D007144 ORTHO05D008709 3.0e-15 85.9 56 75.0
MBI13_g27793_MAGBIO Magnolia biondii HOM05D007144 ORTHO05D008709 3.9e-15 85.5 71 59.2
MD11G1186200 Malus domestica HOM05D007144 ORTHO05D008709 5.1e-15 85.1 54 77.8
arahy.Tifrunner.gnm1.ann1.A9WCXI Arachis hypogaea HOM05D007144 ORTHO05D008709 6.6e-15 84.7 56 75.0
TPR.G13466 Trifolium pratense HOM05D007144 ORTHO05D008709 6.6e-15 84.7 60 70.0
FvH4_1g25870 Fragaria vesca HOM05D007144 ORTHO05D008709 8.6e-15 84.3 139 71.9
FAN19G1536 Fragaria x ananassa HOM05D007144 ORTHO05D008709 8.6e-15 84.3 139 71.9
MD03G1167000 Malus domestica HOM05D007144 ORTHO05D008709 1.1e-14 84.0 73 65.8
TAR623G0360 Trochodendron aralioides HOM05D007144 ORTHO05D008709 1.1e-14 84.0 53 77.4
arahy.Tifrunner.gnm1.ann1.FNNB0Q Arachis hypogaea HOM05D007144 ORTHO05D008709 1.5e-14 83.6 54 75.9
arahy.Tifrunner.gnm1.ann1.J3HRR4 Arachis hypogaea HOM05D007144 ORTHO05D008709 1.5e-14 83.6 54 75.9
Gohir.A07G120000 Gossypium hirsutum HOM05D007144 ORTHO05D008709 1.9e-14 83.2 56 73.2
Sed0028076 Sechium edule HOM05D007144 ORTHO05D008709 1.9e-14 83.2 53 79.2
A10p25500 Brassica napus HOM05D007144 ORTHO05D008709 2.5e-14 82.8 56 73.2
C09p64580 Brassica napus HOM05D007144 ORTHO05D008709 2.5e-14 82.8 56 73.2
BolC9t59291H Brassica oleracea HOM05D007144 ORTHO05D008709 2.5e-14 82.8 56 73.2
BraA10t44614Z Brassica rapa HOM05D007144 ORTHO05D008709 2.5e-14 82.8 56 73.2
FAN23G1846 Fragaria x ananassa HOM05D007144 ORTHO05D008709 2.5e-14 82.8 56 67.9
Sabra09G0053500 Salix brachista HOM05D007144 ORTHO05D008709 2.5e-14 82.8 56 73.2
RcHm_v2.0_Chr3g0485011 Rosa chinensis HOM05D007144 ORTHO05D008709 3.3e-14 82.4 51 76.5
FAN26G3363 Fragaria x ananassa HOM05D007144 ORTHO05D008709 5.6e-14 81.6 56 66.1
Glyma.08G150200 Glycine max HOM05D007144 ORTHO05D008709 5.6e-14 81.6 50 80.0
AUR62000186 Chenopodium quinoa HOM05D007144 ORTHO05D008709 9.5e-14 80.9 146 77.4
Rhsim13G0210700 Rhododendron simsii HOM05D007144 ORTHO05D008709 9.5e-14 80.9 62 67.7
HPP92_013978 Vanilla planifolia HOM05D007144 ORTHO05D008709 9.5e-14 80.9 74 56.8
AT5G12320 Arabidopsis thaliana HOM05D007144 ORTHO05D008709 1.2e-13 80.5 56 67.9
Ca_12164_v3 Cicer arietinum L. HOM05D007144 ORTHO05D008709 2.1e-13 79.7 52 75.0
Manes.01G179700 Manihot esculenta HOM05D007144 ORTHO05D008709 3.6e-13 79.0 67 67.2
CsaV3_6G039020 Cucumis sativus L. HOM05D007144 ORTHO05D008709 6.2e-13 78.2 56 71.4
ECA236G5047 Erigeron canadensis HOM05D007144 ORTHO05D008709 6.2e-13 78.2 74 55.4
Manes.02G140201 Manihot esculenta HOM05D007144 ORTHO05D008709 8.1e-13 77.8 50 74.0
unitig_749.g14354 Utricularia gibba HOM05D007144 ORTHO05D008709 1.1e-12 77.4 75 54.7
TWI23G1223 Tripterygium wilfordii HOM05D007144 ORTHO05D008709 1.8e-12 76.6 59 66.1
Aa31LG3G14910 Aethionema arabicum HOM05D007144 ORTHO05D008709 3.1e-12 75.9 50 74.0
MELO3C014563.2 Cucumis melo HOM05D007144 ORTHO05D008709 8.9e-12 74.3 53 71.7
QL01p017309 Quercus lobata HOM05D007144 ORTHO05D008709 2.0e-11 73.2 48 79.2
Eucgr.B03730 Eucalyptus grandis HOM05D007144 ORTHO05D008709 2.6e-11 72.8 62 54.8
Psat1g051560 Pisum sativum HOM05D007144 ORTHO05D008709 7.6e-11 71.2 46 76.1
Atru.chr4.1901 Acer truncatum HOM05D007144 ORTHO05D008709 1.3e-10 70.5 58 63.8
GSVIVG01037268001 Vitis vinifera HOM05D007144 ORTHO05D008709 1.4e-09 67.0 42 76.2
CANSAT54G2482 Cannabis sativa HOM05D007144 ORTHO05D008709 3.2e-09 65.9 49 67.3
Lalb_Chr18g0054451 Lupinus albus HOM05D007144 ORTHO05D008709 3.2e-09 65.9 43 74.4
Mapoly0026s0092 Marchantia polymorpha HOM05D007144 ORTHO05D008709 1.6e-08 63.5 59 52.5
Phvul.006G021300 Phaseolus vulgaris HOM05D007144 ORTHO05D008709 1.6e-08 63.5 41 73.2
PGR102G1924 Punica granatum HOM05D007144 ORTHO05D008709 2.1e-08 63.2 58 55.2
Lj1A285T18 Lonicera japonica HOM05D007144 ORTHO05D008709 1.3e-07 60.5 41 75.6
Nn7g36693 Nelumbo nucifera HOM05D007144 ORTHO05D008709 5.1e-07 58.5 37 73.0
CBR_g48945 Chara braunii HOM05D007144 ORTHO05D008709 4.3e-06 55.5 53 52.8


User provided reference genes

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