Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G875.8 Capsicum annuum HOM05D001483 ORTHO05D001463 9.6e-65 250.0 124 100.0
CAN.G43.15 Capsicum annuum HOM05D001483 ORTHO05D001463 1.7e-37 159.5 114 75.4
Peaxi162Scf00128g01227 Petunia axillaris HOM05D001483 ORTHO05D001463 2.9e-37 158.7 114 71.9
Nitab4.5_0001404g0050 Nicotiana tabacum HOM05D001483 ORTHO05D001463 2.5e-36 155.6 116 72.4
Solyc05g015390.3 Solanum lycopersicum HOM05D001483 ORTHO05D001463 2.5e-36 155.6 116 69.8
Sopen05g010680 Solanum pennellii HOM05D001483 ORTHO05D001463 2.5e-36 155.6 116 71.6
PGSC0003DMG400029107 Solanum tuberosum HOM05D001483 ORTHO05D001463 1.4e-34 149.8 114 70.2
Nitab4.5_0000060g0050 Nicotiana tabacum HOM05D001483 ORTHO05D001463 2.6e-33 145.6 117 70.9
Peaxi162Scf00518g00425 Petunia axillaris HOM05D001483 ORTHO05D001463 6.3e-32 141.0 116 64.7
Oeu058922.1 Olea europaea HOM05D001483 ORTHO05D001463 7.7e-22 107.5 113 51.3
SalBow2G0646 Salvia bowleyana HOM05D001483 ORTHO05D001463 2.2e-21 105.9 113 46.9
SGA_v2.0_scaffold87G27155 Striga asiatica HOM05D001483 ORTHO05D001463 2.5e-20 102.4 113 48.7
SalBow8G2469 Salvia bowleyana HOM05D001483 ORTHO05D001463 7.2e-20 100.9 113 46.0
Migut.E00019 Erythranthe guttata HOM05D001483 ORTHO05D001463 3.6e-19 98.6 112 46.4
Oeu036872.1 Olea europaea HOM05D001483 ORTHO05D001463 1.2e-17 93.6 108 46.3
SGA_v2.0_scaffold391G50635 Striga asiatica HOM05D001483 ORTHO05D001463 4.4e-17 91.7 102 47.1
unitig_26.g10396 Utricularia gibba HOM05D001483 ORTHO05D001463 7.5e-17 90.9 113 41.6
Dinv10958 Davidia involucrata HOM05D001483 ORTHO05D001463 2.8e-16 89.0 105 44.8
MSTRG.2459 Avicennia marina HOM05D001483 ORTHO05D001463 5.4e-15 84.7 117 41.9
Cc11_g16880 Coffea canephora HOM05D001483 ORTHO05D001463 5.4e-15 84.7 111 40.5
Manes.13G012400 Manihot esculenta HOM05D001483 ORTHO05D001463 1.6e-14 83.2 114 40.4
AUR62024111 Chenopodium quinoa HOM05D001483 ORTHO05D001463 2.7e-14 82.4 88 48.9
AUR62005619 Chenopodium quinoa HOM05D001483 ORTHO05D001463 3.5e-14 82.0 88 48.9
Ca_16460_v3 Cicer arietinum L. HOM05D001483 ORTHO05D001463 1.3e-13 80.1 106 43.4
Glyma.18G006700 Glycine max HOM05D001483 ORTHO05D001463 1.3e-13 80.1 110 41.8
Lj6g0001795 Lotus japonicus HOM05D001483 ORTHO05D001463 1.7e-13 79.7 104 40.4
MSTRG.8002 Avicennia marina HOM05D001483 ORTHO05D001463 2.2e-13 79.3 111 39.6
Haze_12417 Corylus avellana HOM05D001483 ORTHO05D001463 2.2e-13 79.3 108 41.7
CSS0048035 Camellia sinensis var. sinensis HOM05D001483 ORTHO05D001463 2.9e-13 79.0 95 46.3
MD01G1161800 Malus domestica HOM05D001483 ORTHO05D001463 2.9e-13 79.0 98 41.8
Manes.12G011500 Manihot esculenta HOM05D001483 ORTHO05D001463 2.9e-13 79.0 112 39.3
VMungo1383G3407 Vigna mungo HOM05D003724 ORTHO05D004367 2.9e-13 79.0 109 38.5
Ciclev10032648m.g Citrus clementina HOM05D001483 ORTHO05D001463 5.0e-13 78.2 92 43.5
Glyma.11G250500 Glycine max HOM05D001483 ORTHO05D001463 5.0e-13 78.2 113 39.8
Psat5g096240 Pisum sativum HOM05D001483 ORTHO05D001463 6.5e-13 77.8 88 46.6
Atru.chr11.2322 Acer truncatum HOM05D001483 ORTHO05D001463 8.5e-13 77.4 116 38.8
FvH4_4g23790 Fragaria vesca HOM05D001483 ORTHO05D001463 8.5e-13 77.4 99 45.5
Phvul.001G261800 Phaseolus vulgaris HOM05D001483 ORTHO05D001463 8.5e-13 77.4 113 39.8
TPR.G33049 Trifolium pratense HOM05D001483 ORTHO05D001463 8.5e-13 77.4 88 46.6
Cfa009368 Carpinus fangiana HOM05D001483 ORTHO05D001463 1.1e-12 77.0 110 40.9
Medtr8g080570 Medicago truncatula HOM05D001483 ORTHO05D001463 1.1e-12 77.0 97 41.2
TPR.G17067 Trifolium pratense HOM05D001483 ORTHO05D001463 1.1e-12 77.0 94 42.6
Ca_18035_v3 Cicer arietinum L. HOM05D001483 ORTHO05D001463 1.5e-12 76.6 93 44.1
FAN07G0712 Fragaria x ananassa HOM05D001483 ORTHO05D001463 1.9e-12 76.3 93 47.3
QL03p052770 Quercus lobata HOM05D001483 ORTHO05D001463 1.9e-12 76.3 113 40.7
MD13G1118800 Malus domestica HOM05D001483 ORTHO05D001463 2.5e-12 75.9 113 38.9
Medtr1g055235 Medicago truncatula HOM05D001483 ORTHO05D001463 2.5e-12 75.9 97 40.2
Sabra01G0039900 Salix brachista HOM05D001483 ORTHO05D001463 2.5e-12 75.9 114 37.7
EL10Ac6g13501 Beta vulgaris HOM05D001483 ORTHO05D001463 3.2e-12 75.5 89 43.8
CiPaw.06G102500 Carya illinoinensis HOM05D001483 ORTHO05D001463 3.2e-12 75.5 109 40.4
Potri.001G055300 Populus trichocarpa HOM05D001483 ORTHO05D001463 3.2e-12 75.5 112 38.4
MSTRG.506 Avicennia marina HOM05D001483 ORTHO05D001463 4.2e-12 75.1 102 41.2
Ah.03g136160 Amaranthus hybridus HOM05D001483 ORTHO05D001463 5.5e-12 74.7 90 42.2
Hund25464 Selenicereus undatus HOM05D001483 ORTHO05D001463 5.5e-12 74.7 93 41.9
Lj3C1068T4 Lonicera japonica HOM05D001483 ORTHO05D001463 9.4e-12 73.9 95 44.2
Lj4g0013589 Lotus japonicus HOM05D001483 ORTHO05D001463 9.4e-12 73.9 104 39.4
Medtr3g085370 Medicago truncatula HOM05D001483 ORTHO05D001463 9.4e-12 73.9 94 42.6
MD16G1119000 Malus domestica HOM05D001483 ORTHO05D001463 1.2e-11 73.6 111 37.8
Prupe.1G226000 Prunus persica HOM05D001483 ORTHO05D001463 1.2e-11 73.6 117 40.2
RcHm_v2.0_Chr4g0430281 Rosa chinensis HOM05D001483 ORTHO05D001463 1.2e-11 73.6 91 45.1
Sc04g0010120 Simmondsia chinensis HOM05D001483 ORTHO05D001463 1.2e-11 73.6 103 40.8
Glyma.05G147200 Glycine max HOM05D001483 ORTHO05D001463 1.6e-11 73.2 107 38.3
Phvul.L001946 Phaseolus vulgaris HOM05D001483 ORTHO05D001463 1.6e-11 73.2 92 40.2
TWI75G1813 Tripterygium wilfordii HOM05D001483 ORTHO05D001463 1.6e-11 73.2 95 40.0
arahy.Tifrunner.gnm1.ann1.12N6X7 Arachis hypogaea HOM05D001483 ORTHO05D001463 2.1e-11 72.8 90 44.4
CANSAT01G2055 Cannabis sativa HOM05D001483 ORTHO05D001463 2.1e-11 72.8 114 39.5
FAN22G1802 Fragaria x ananassa HOM05D001483 ORTHO05D001463 2.1e-11 72.8 93 45.2
Glyma.08G104200 Glycine max HOM05D001483 ORTHO05D001463 2.7e-11 72.4 99 38.4
Actinidia20709 Actinidia chinensis HOM05D001483 ORTHO05D001463 3.6e-11 72.0 95 43.2
CiPaw.05G110000 Carya illinoinensis HOM05D001483 ORTHO05D001463 3.6e-11 72.0 90 42.2
Potri.003G173100 Populus trichocarpa HOM05D001483 ORTHO05D001463 4.7e-11 71.6 117 39.3
arahy.Tifrunner.gnm1.ann1.6TI0EB Arachis hypogaea HOM05D001483 ORTHO05D001463 6.1e-11 71.2 90 43.3
VMungo0251G1711 Vigna mungo HOM05D001483 ORTHO05D001463 6.1e-11 71.2 90 41.1
Eucgr.H04640 Eucalyptus grandis HOM05D001483 ORTHO05D001463 1.0e-10 70.5 113 33.6
Sabra03G0126600 Salix brachista HOM05D001483 ORTHO05D001463 1.4e-10 70.1 112 37.5
Lj6A826T52 Lonicera japonica HOM05D001483 ORTHO05D001463 1.8e-10 69.7 104 37.5
Sed0023952 Sechium edule HOM05D001483 ORTHO05D001463 1.8e-10 69.7 95 40.0
Lalb_Chr23g0278021 Lupinus albus HOM05D001483 ORTHO05D001463 5.2e-10 68.2 114 36.0
Rhsim12G0025900 Rhododendron simsii HOM05D001483 ORTHO05D001463 5.2e-10 68.2 97 40.2
MD08G1165600 Malus domestica HOM05D001483 ORTHO05D001463 8.8e-10 67.4 98 38.8
Lalb_Chr13g0294311 Lupinus albus HOM05D001483 ORTHO05D001463 1.2e-09 67.0 103 36.9
Psat0s2314g0080 Pisum sativum HOM05D001483 ORTHO05D001463 1.2e-09 67.0 92 39.1
CsaV3_5G030300 Cucumis sativus L. HOM05D001483 ORTHO05D001463 2.0e-09 66.2 96 39.6
THA.LOC104807878 Tarenaya hassleriana HOM05D001483 ORTHO05D001463 2.0e-09 66.2 115 31.3
Actinidia09652 Actinidia chinensis HOM05D001483 ORTHO05D001463 2.6e-09 65.9 95 38.9
Cpa.g.sc43.55 Carica papaya HOM05D001483 ORTHO05D001463 2.6e-09 65.9 88 40.9
MELO3C011868.2 Cucumis melo HOM05D001483 ORTHO05D001463 4.4e-09 65.1 119 37.0
vmacro16107 Vaccinium macrocarpon HOM05D001483 ORTHO05D001463 4.4e-09 65.1 90 40.0
TWI36G0558 Tripterygium wilfordii HOM05D001483 ORTHO05D001463 5.7e-09 64.7 106 38.7
arahy.Tifrunner.gnm1.ann1.SXJ33X Arachis hypogaea HOM05D001483 ORTHO05D001463 9.8e-09 63.9 116 36.2
vmacro01332 Vaccinium macrocarpon HOM05D001483 ORTHO05D001463 9.8e-09 63.9 95 37.9
ClCG11G013690 Citrullus lanatus HOM05D001483 ORTHO05D001463 1.3e-08 63.5 118 36.4
Potri.002G206000 Populus trichocarpa HOM05D001483 ORTHO05D001463 1.3e-08 63.5 62 50.0
AL2G25910 Arabidopsis lyrata HOM05D001483 ORTHO05D001463 2.2e-08 62.8 104 34.6
Dinv17561 Davidia involucrata HOM05D001483 ORTHO05D001463 2.2e-08 62.8 98 36.7
arahy.Tifrunner.gnm1.ann1.BZTS91 Arachis hypogaea HOM05D001483 ORTHO05D001463 2.8e-08 62.4 116 35.3
Rhsim12G0099400 Rhododendron simsii HOM05D001483 ORTHO05D001463 8.3e-08 60.8 95 37.9
AT1G67360 Arabidopsis thaliana HOM05D001483 ORTHO05D001463 1.1e-07 60.5 101 33.7
C06p38730 Brassica napus HOM05D001483 ORTHO05D001463 1.1e-07 60.5 112 33.9
Lalb_Chr08g0230631 Lupinus albus HOM05D001483 ORTHO05D001463 1.1e-07 60.5 90 38.9
Aa31sc377G20 Aethionema arabicum HOM05D001483 ORTHO05D001463 2.4e-07 59.3 111 36.0
BcaB05g24272 Brassica carinata HOM05D001483 ORTHO05D001463 2.4e-07 59.3 109 31.2
BcaB05g24278 Brassica carinata HOM05D001483 ORTHO05D001463 2.4e-07 59.3 109 31.2
CARHR059900 Cardamine hirsuta HOM05D001483 ORTHO05D001463 2.4e-07 59.3 122 32.0
PSO017G5042 Papaver somniferum HOM05D001483 ORTHO05D001463 2.4e-07 59.3 111 32.4
BcaC03g14838 Brassica carinata HOM05D001483 ORTHO05D001463 9.2e-07 57.4 109 30.3
A07p32580 Brassica napus HOM05D001483 ORTHO05D001463 9.2e-07 57.4 117 34.2
C02p22990 Brassica napus HOM05D001483 ORTHO05D001463 9.2e-07 57.4 109 30.3
BolC2t08443H Brassica oleracea HOM05D001483 ORTHO05D001463 9.2e-07 57.4 109 30.3
BraA07t30882Z Brassica rapa HOM05D001483 ORTHO05D001463 9.2e-07 57.4 117 34.2
Thhalv10019076m.g Eutrema salsugineum HOM05D001483 ORTHO05D001463 9.2e-07 57.4 124 32.3
THA.LOC104825508 Tarenaya hassleriana HOM05D001483 ORTHO05D001463 9.2e-07 57.4 103 32.0
Thecc.02G209100 Theobroma cacao HOM05D001483 ORTHO05D001463 9.2e-07 57.4 110 34.5
TAR636G1635 Trochodendron aralioides HOM05D001483 ORTHO05D001463 9.2e-07 57.4 92 38.0
Actinidia24337 Actinidia chinensis HOM05D001483 ORTHO05D001463 1.2e-06 57.0 68 36.8
BolC6t38962H Brassica oleracea HOM05D001483 ORTHO05D001463 1.2e-06 57.0 112 32.1
Gohir.D04G182700 Gossypium hirsutum HOM05D001483 ORTHO05D001463 1.2e-06 57.0 117 35.9
Gorai.012G175700 Gossypium raimondii HOM05D001483 ORTHO05D001463 1.2e-06 57.0 112 33.9
Lj6A826T53 Lonicera japonica HOM05D001483 ORTHO05D001463 1.2e-06 57.0 89 31.5
ECA233G4747 Erigeron canadensis HOM05D001483 ORTHO05D029297 1.6e-06 56.6 99 32.3
Hma1.2p1_0209F.1_g088550 Hydrangea macrophylla HOM05D001483 ORTHO05D001463 1.6e-06 56.6 78 39.7
Lj1A28T43 Lonicera japonica HOM05D001483 ORTHO05D001463 1.6e-06 56.6 66 39.4
Ciclev10022084m.g Citrus clementina HOM05D001483 ORTHO05D001463 2.0e-06 56.2 82 37.8
DCAR_018333 Daucus carota HOM05D001483 ORTHO05D001463 2.0e-06 56.2 70 40.0
FAN20G0333 Fragaria x ananassa HOM05D001483 ORTHO05D001463 2.0e-06 56.2 78 39.7
Gohir.A04G139500 Gossypium hirsutum HOM05D001483 ORTHO05D001463 2.0e-06 56.2 112 33.0
Manes.05G063700 Manihot esculenta HOM05D001483 ORTHO05D001463 2.0e-06 56.2 70 37.1
Sabra02G0153400 Salix brachista HOM05D001483 ORTHO05D001463 2.0e-06 56.2 60 46.7
GSVIVG01027980001 Vitis vinifera HOM05D001483 ORTHO05D001463 2.0e-06 56.2 72 37.5
BcaB03g15350 Brassica carinata HOM05D001483 ORTHO05D001463 2.7e-06 55.8 112 32.1
Cpa.g.sc9.214 Carica papaya HOM05D001483 ORTHO05D001463 2.7e-06 55.8 62 40.3
COL.COLO4_23370 Corchorus olitorius HOM05D001483 ORTHO05D001463 2.7e-06 55.8 84 34.5
Dinv19712 Davidia involucrata HOM05D001483 ORTHO05D001463 2.7e-06 55.8 78 35.9
A02p14190 Brassica napus HOM05D001483 ORTHO05D001463 3.5e-06 55.5 119 30.3
Gohir.A01G158200 Gossypium hirsutum HOM05D001483 ORTHO05D001463 4.5e-06 55.1 96 34.4
Ciclev10003627m.g Citrus clementina HOM05D001483 ORTHO05D001463 5.9e-06 54.7 66 42.4
COL.COLO4_20399 Corchorus olitorius HOM05D001483 ORTHO05D001463 5.9e-06 54.7 112 30.4
Duzib133G1257 Durio zibethinus HOM05D001483 ORTHO05D001463 5.9e-06 54.7 66 39.4
Sp5g22310 Schrenkiella parvula HOM05D001483 ORTHO05D001463 5.9e-06 54.7 96 33.3
Sopen09g029750 Solanum pennellii HOM05D001483 ORTHO05D001463 5.9e-06 54.7 60 43.3
PGSC0003DMG400011370 Solanum tuberosum HOM05D001483 ORTHO05D001463 5.9e-06 54.7 60 41.7
FAN27G2431 Fragaria x ananassa HOM05D001483 ORTHO05D001463 7.7e-06 54.3 78 38.5
PSO210G0621 Papaver somniferum HOM05D001483 ORTHO05D001463 7.7e-06 54.3 86 33.7
PSO478G2951 Papaver somniferum HOM05D001483 ORTHO05D001463 7.7e-06 54.3 112 29.5
Solyc09g074930.3 Solanum lycopersicum HOM05D001483 ORTHO05D001463 7.7e-06 54.3 60 43.3


User provided reference genes

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