Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G874.50 Capsicum annuum HOM05D005992 ORTHO05D007476 1.9e-92 342.4 168 100.0
Sopen06g034190 Solanum pennellii HOM05D005992 ORTHO05D007476 1.3e-77 293.1 169 87.6
PGSC0003DMG400027679 Solanum tuberosum HOM05D005992 ORTHO05D007476 2.3e-77 292.4 169 87.0
Solyc06g082830.3 Solanum lycopersicum HOM05D005992 ORTHO05D007476 1.4e-74 283.1 169 85.8
Nitab4.5_0001348g0200 Nicotiana tabacum HOM05D005992 ORTHO05D007476 5.5e-71 271.2 171 80.7
Nitab4.5_0008751g0010 Nicotiana tabacum HOM05D005992 ORTHO05D007476 4.6e-70 268.1 171 79.5
Peaxi162Scf00390g00125 Petunia axillaris HOM05D005992 ORTHO05D007476 1.1e-66 256.9 171 77.2
Nitab4.5_0009028g0010 Nicotiana tabacum HOM05D005992 ORTHO05D007476 1.7e-51 206.5 161 68.3
Nitab4.5_0005967g0050 Nicotiana tabacum HOM05D005992 ORTHO05D007476 1.4e-50 203.4 170 62.9
Cc01_g15730 Coffea canephora HOM05D005992 ORTHO05D007476 6.1e-46 188.0 173 61.8
Oeu058218.1 Olea europaea HOM05D005992 ORTHO05D007476 2.2e-40 169.5 175 53.1
SGA_v2.0_scaffold8G04484 Striga asiatica HOM05D005992 ORTHO05D007476 2.9e-40 169.1 167 56.9
Migut.D00757 Erythranthe guttata HOM05D005992 ORTHO05D007476 5.0e-40 168.3 167 57.5
HanXRQChr08g0230801 Helianthus annuus HOM05D005992 ORTHO05D007476 6.1e-38 161.4 155 55.5
SalBow6G0883 Salvia bowleyana HOM05D005992 ORTHO05D007476 8.0e-38 161.0 180 51.7
Lsat_1_v5_gn_9_15721 Lactuca sativa HOM05D005992 ORTHO05D007476 1.8e-37 159.8 169 52.1
Hma1.2p1_0834F.1_g225730 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 5.7e-36 154.8 171 52.6
CSS0023701 Camellia sinensis var. sinensis HOM05D005992 ORTHO05D007476 2.2e-35 152.9 180 52.8
CSS0036227 Camellia sinensis var. sinensis HOM05D005992 ORTHO05D007476 2.2e-35 152.9 180 52.8
SalBow2G0316 Salvia bowleyana HOM05D005992 ORTHO05D007476 3.1e-34 149.1 210 43.8
MSTRG.18519 Avicennia marina HOM05D005992 ORTHO05D007476 5.3e-34 148.3 153 56.9
Dinv28773 Davidia involucrata HOM05D005992 ORTHO05D007476 1.6e-33 146.7 173 49.7
Hma1.2p1_0161F.1_g071860 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 3.5e-33 145.6 168 50.6
Cpa.g.sc8.7 Carica papaya HOM05D005992 ORTHO05D007476 1.7e-32 143.3 167 52.1
ECA247G1400 Erigeron canadensis HOM05D005992 ORTHO05D007476 1.1e-31 140.6 154 51.3
Manes.13G058400 Manihot esculenta HOM05D005992 ORTHO05D007476 3.2e-31 139.0 174 48.9
unitig_60.g25570 Utricularia gibba HOM05D005992 ORTHO05D007476 2.1e-30 136.3 147 53.7
Potri.014G172600 Populus trichocarpa HOM05D005992 ORTHO05D007476 3.6e-30 135.6 174 47.1
Manes.12G055803 Manihot esculenta HOM05D005992 ORTHO05D007476 8.0e-30 134.4 171 49.1
Medtr3g118100 Medicago truncatula HOM05D005992 ORTHO05D007476 2.0e-28 129.8 175 47.4
CiPaw.13G059000 Carya illinoinensis HOM05D005992 ORTHO05D007476 7.5e-28 127.9 156 50.6
MD03G1298800 Malus domestica HOM05D005992 ORTHO05D007476 2.8e-27 125.9 154 51.9
PGR044G1143 Punica granatum HOM05D005992 ORTHO05D007476 4.8e-27 125.2 148 52.7
Prupe.8G267200 Prunus persica HOM05D005992 ORTHO05D007476 1.4e-26 123.6 167 47.3
Eucgr.K02345 Eucalyptus grandis HOM05D005992 ORTHO05D007476 3.1e-26 122.5 167 46.7
Gohir.A11G146200 Gossypium hirsutum HOM05D005992 ORTHO05D007476 7.0e-26 121.3 163 43.6
Gohir.D11G152400 Gossypium hirsutum HOM05D005992 ORTHO05D007476 7.0e-26 121.3 163 43.6
RcHm_v2.0_Chr7g0176831 Rosa chinensis HOM05D005992 ORTHO05D007476 7.0e-26 121.3 171 45.0
Psat5g001840 Pisum sativum HOM05D005992 ORTHO05D007476 9.1e-26 120.9 162 45.7
FAN04G1498 Fragaria x ananassa HOM05D005992 ORTHO05D007476 1.2e-25 120.6 169 45.0
FAN08G0048 Fragaria x ananassa HOM05D005992 ORTHO05D007476 1.2e-25 120.6 169 45.0
Gorai.007G163000 Gossypium raimondii HOM05D005992 ORTHO05D007476 1.2e-25 120.6 163 43.6
Lj1g0017920 Lotus japonicus HOM05D005992 ORTHO05D007476 1.2e-25 120.6 165 47.3
FvH4_5g18680 Fragaria vesca HOM05D005992 ORTHO05D007476 2.0e-25 119.8 169 45.6
FAN18G0660 Fragaria x ananassa HOM05D005992 ORTHO05D007476 2.0e-25 119.8 169 45.6
GSVIVG01004128001 Vitis vinifera HOM05D005992 ORTHO05D007476 2.7e-25 119.4 134 53.0
Nn7g37421 Nelumbo nucifera HOM05D005992 ORTHO05D007476 3.5e-25 119.0 169 46.7
FAN13G0560 Fragaria x ananassa HOM05D005992 ORTHO05D007476 5.9e-25 118.2 169 44.4
QL09p044779 Quercus lobata HOM05D005992 ORTHO05D007476 5.9e-25 118.2 155 46.5
CANSAT11G0965 Cannabis sativa HOM05D005992 ORTHO05D007476 7.7e-25 117.9 175 42.9
AUR62017763 Chenopodium quinoa HOM05D005992 ORTHO05D007476 1.0e-24 117.5 161 46.0
DCAR_018600 Daucus carota HOM05D005992 ORTHO05D007476 2.2e-24 116.3 199 43.2
vmacro14669 Vaccinium macrocarpon HOM05D005992 ORTHO05D007476 2.2e-24 116.3 213 38.5
arahy.Tifrunner.gnm1.ann1.DJH8FA Arachis hypogaea HOM05D005992 ORTHO05D007476 2.9e-24 115.9 169 45.0
Duzib133G0028 Durio zibethinus HOM05D005992 ORTHO05D007476 3.8e-24 115.5 165 42.4
Os02g0609400 Oryza sativa ssp. japonica HOM05D005992 ORTHO05D007476 8.5e-24 114.4 127 52.0
Glyma.04G002700 Glycine max HOM05D005992 ORTHO05D007476 1.9e-23 113.2 164 43.9
Oeu064700.1 Olea europaea HOM05D005992 ORTHO05D007476 1.9e-23 113.2 96 60.4
Ca_15291_v3 Cicer arietinum L. HOM05D005992 ORTHO05D007476 4.2e-23 112.1 182 44.5
THA.LOC104822452 Tarenaya hassleriana HOM05D005992 ORTHO05D007476 4.2e-23 112.1 154 42.9
Hma1.2p1_1756F.1_g301045 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 9.4e-23 110.9 104 58.7
Sopen09g012660 Solanum pennellii HOM05D005992 ORTHO05D007476 1.2e-22 110.5 84 64.3
Duzib138G0279 Durio zibethinus HOM05D005992 ORTHO05D007476 1.6e-22 110.2 159 44.0
THA.LOC104819021 Tarenaya hassleriana HOM05D005992 ORTHO05D007476 1.6e-22 110.2 152 42.1
PSO357G0365 Papaver somniferum HOM05D005992 ORTHO05D007476 6.1e-22 108.2 158 46.8
Phvul.009G118300 Phaseolus vulgaris HOM05D005992 ORTHO05D007476 6.1e-22 108.2 168 42.3
COL.COLO4_19718 Corchorus olitorius HOM05D005992 ORTHO05D007476 1.0e-21 107.5 161 42.2
Thecc.01G203400 Theobroma cacao HOM05D005992 ORTHO05D007476 1.4e-21 107.1 166 41.6
MBI07_g44661_MAGBIO Magnolia biondii HOM05D005992 ORTHO05D007476 2.3e-21 106.3 144 45.1
PSO170G4201 Papaver somniferum HOM05D005992 ORTHO05D007476 2.3e-21 106.3 158 46.2
TWI36G1335 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 2.3e-21 106.3 165 43.0
Glyma.06G002700 Glycine max HOM05D005992 ORTHO05D007476 3.0e-21 105.9 168 43.5
Lalb_Chr11g0061201 Lupinus albus HOM05D005992 ORTHO05D007476 4.0e-21 105.5 142 47.2
Rhsim01G0246100 Rhododendron simsii HOM05D005992 ORTHO05D007476 5.2e-21 105.1 215 36.3
Sc10g0006540 Simmondsia chinensis HOM05D005992 ORTHO05D007476 5.2e-21 105.1 156 46.2
TWI75G1816 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 5.2e-21 105.1 159 43.4
Lj1C108T9 Lonicera japonica HOM05D005992 ORTHO05D007476 1.2e-20 104.0 105 53.3
TWI36G0694 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 1.2e-20 104.0 165 42.4
Atru.chr6.3466 Acer truncatum HOM05D005992 ORTHO05D007476 1.5e-20 103.6 166 39.8
HPP92_004514 Vanilla planifolia HOM05D005992 ORTHO05D007476 1.5e-20 103.6 149 45.0
VMungo1309G0397 Vigna mungo HOM05D005992 ORTHO05D007476 2.0e-20 103.2 163 42.9
EL10Ac9g23025 Beta vulgaris HOM05D005992 ORTHO05D007476 3.4e-20 102.4 138 44.9
Ah.04g163410 Amaranthus hybridus HOM05D005992 ORTHO05D007476 4.4e-20 102.1 163 41.1
Ciclev10016954m.g Citrus clementina HOM05D005992 ORTHO05D007476 6.3e-19 98.2 167 40.7
Sabra14G0132200 Salix brachista HOM05D005992 ORTHO05D007476 1.4e-18 97.1 215 34.9
PGSC0003DMG400020300 Solanum tuberosum HOM05D005992 ORTHO05D007476 2.4e-18 96.3 97 54.6
arahy.Tifrunner.gnm1.ann1.B4TR6Y Arachis hypogaea HOM05D005992 ORTHO05D007476 5.4e-18 95.1 163 41.1
CARHR183920 Cardamine hirsuta HOM05D005992 ORTHO05D007476 9.2e-18 94.4 133 44.4
Zm00001eb246760 Zea mays HOM05D005992 ORTHO05D007476 9.2e-18 94.4 116 47.4
CDE07G1966 Ceratophyllum demersum HOM05D005992 ORTHO05D007476 1.2e-17 94.0 148 40.5
Aqoxy2G04184 Aquilegia oxysepala HOM05D001906 ORTHO05D002083 5.9e-17 91.7 124 40.3
TPR.G38510 Trifolium pratense HOM05D005992 ORTHO05D007476 1.0e-16 90.9 137 43.8
AL8G21060 Arabidopsis lyrata HOM05D005992 ORTHO05D007476 1.7e-16 90.1 128 44.5
Os02g0599500 Oryza sativa ssp. japonica HOM05D005992 ORTHO05D007476 2.3e-16 89.7 105 47.6
CDE04G1688 Ceratophyllum demersum HOM05D005992 ORTHO05D007476 2.9e-16 89.4 159 39.6
AT5G48335 Arabidopsis thaliana HOM05D005992 ORTHO05D007476 5.0e-16 88.6 128 43.0
AUR62032915 Chenopodium quinoa HOM05D005992 ORTHO05D007476 3.3e-15 85.9 130 42.3
TWI18G0378 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 5.6e-15 85.1 123 45.5
BraA05t22792Z Brassica rapa HOM05D005992 ORTHO05D007476 9.5e-15 84.3 156 36.5
CiPaw.14G047400 Carya illinoinensis HOM05D005992 ORTHO05D007476 9.5e-15 84.3 119 45.4
TAR362G0776 Trochodendron aralioides HOM05D005992 ORTHO05D007476 3.6e-14 82.4 99 53.5
Carub.0008s0791 Capsella rubella HOM05D005992 ORTHO05D007476 6.8e-13 78.2 134 41.0
Thhalv10021713m.g Eutrema salsugineum HOM05D005992 ORTHO05D007476 8.9e-13 77.8 130 40.8
CARHR082280 Cardamine hirsuta HOM05D005992 ORTHO05D007476 1.2e-12 77.4 154 35.1
A05p40610 Brassica napus HOM05D005992 ORTHO05D007476 1.5e-12 77.0 155 34.2
Sp3g06520 Schrenkiella parvula HOM05D005992 ORTHO05D007476 1.5e-12 77.0 153 32.7
C05p59720 Brassica napus HOM05D005992 ORTHO05D007476 2.2e-11 73.2 155 34.2
BolC5t34626H Brassica oleracea HOM05D005992 ORTHO05D007476 2.2e-11 73.2 155 34.2
Solyc09g018900.3 Solanum lycopersicum HOM05D005992 ORTHO05D007476 4.9e-11 72.0 44 75.0
ATR0743G072 Amborella trichopoda HOM05D005992 ORTHO05D007476 9.2e-10 67.8 143 35.7
Carub.0003s0715 Capsella rubella HOM05D005992 ORTHO05D007476 2.0e-09 66.6 88 37.5
AL3G18940 Arabidopsis lyrata HOM05D005992 ORTHO05D007476 2.7e-09 66.2 161 28.6
BcaC05g29553 Brassica carinata HOM05D005992 ORTHO05D007476 1.1e-07 60.8 110 37.3
Aa31LG5G18140 Aethionema arabicum HOM05D005992 ORTHO05D007476 1.9e-07 60.1 83 41.0
Actinidia23817 Actinidia chinensis HOM05D005992 ORTHO05D007476 7.3e-07 58.2 74 48.6
Thhalv10005690m.g Eutrema salsugineum HOM05D005992 ORTHO05D007476 3.6e-06 55.8 86 41.9
AT3G07580 Arabidopsis thaliana HOM05D005992 ORTHO05D007476 8.0e-06 54.7 125 31.2


User provided reference genes

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