Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G869.5 Capsicum annuum HOM05D005435 ORTHO05D017747 1.7e-145 519.6 322 100.0
Sopen03g038160 Solanum pennellii HOM05D005435 ORTHO05D007370 5.8e-37 159.1 100 86.0
PGSC0003DMG400005646 Solanum tuberosum HOM05D005435 ORTHO05D007370 7.6e-37 158.7 100 85.0
Solyc03g119280.3 Solanum lycopersicum HOM05D005435 ORTHO05D007370 3.8e-36 156.4 100 85.0
Nitab4.5_0008233g0020 Nicotiana tabacum HOM05D005435 ORTHO05D007370 4.9e-36 156.0 100 83.0
Peaxi162Scf00454g00414 Petunia axillaris HOM05D005435 ORTHO05D007370 8.4e-36 155.2 99 80.8
Nitab4.5_0003433g0040 Nicotiana tabacum HOM05D005435 ORTHO05D007370 2.4e-35 153.7 100 81.0
CAN.G1425.24 Capsicum annuum HOM05D005435 ORTHO05D007370 2.1e-34 150.6 100 81.0
CAN.G350.56 Capsicum annuum HOM05D000107 ORTHO05D000062 4.3e-32 142.9 180 48.3
Dinv03347 Davidia involucrata HOM05D005435 ORTHO05D007370 8.1e-31 138.7 100 74.0
TWI53G0628 Tripterygium wilfordii HOM05D005435 ORTHO05D007370 1.1e-30 138.3 100 70.0
Dinv29101 Davidia involucrata HOM05D002509 ORTHO05D002758 1.8e-30 137.5 100 73.0
Dinv29103 Davidia involucrata HOM05D005435 ORTHO05D007370 1.8e-30 137.5 100 73.0
Manes.08G010700 Manihot esculenta HOM05D005435 ORTHO05D007370 5.3e-30 136.0 100 70.0
RcHm_v2.0_Chr3g0470291 Rosa chinensis HOM05D005435 ORTHO05D007370 5.3e-30 136.0 99 74.7
FAN11G0495 Fragaria x ananassa HOM05D005435 ORTHO05D007370 9.0e-30 135.2 99 74.7
FAN16G2384 Fragaria x ananassa HOM05D005435 ORTHO05D007370 9.0e-30 135.2 99 74.7
FAN21G2931 Fragaria x ananassa HOM05D005435 ORTHO05D007370 9.0e-30 135.2 99 74.7
Cpa.g.sc738.3 Carica papaya HOM05D005435 ORTHO05D007370 1.2e-29 134.8 100 71.0
FvH4_3g29130 Fragaria vesca HOM05D005435 ORTHO05D007370 1.2e-29 134.8 99 73.7
Lj3C986G3 Lonicera japonica HOM05D005435 ORTHO05D007370 1.2e-29 134.8 100 71.0
TAR633G1880 Trochodendron aralioides HOM05D005435 ORTHO05D007370 1.2e-29 134.8 100 73.0
Atru.chr8.1802 Acer truncatum HOM05D005435 ORTHO05D007370 1.5e-29 134.4 100 71.0
FAN25G0236 Fragaria x ananassa HOM05D005435 ORTHO05D007370 1.5e-29 134.4 99 73.7
MD12G1112900 Malus domestica HOM05D005435 ORTHO05D007370 1.5e-29 134.4 100 72.0
Prupe.6G232000 Prunus persica HOM05D005435 ORTHO05D007370 1.5e-29 134.4 100 73.0
GSVIVG01025735001 Vitis vinifera HOM05D005435 ORTHO05D007370 2.0e-29 134.0 100 72.0
MELO3C024475.2 Cucumis melo HOM05D005435 ORTHO05D007370 2.6e-29 133.7 99 70.7
Haze_20541 Corylus avellana HOM05D005435 ORTHO05D007370 4.5e-29 132.9 100 70.0
Eucgr.K02931 Eucalyptus grandis HOM05D005435 ORTHO05D007370 4.5e-29 132.9 100 71.0
Cc06_g19340 Coffea canephora HOM05D005435 ORTHO05D007370 5.8e-29 132.5 100 69.0
Sabra06G0098400 Salix brachista HOM05D005435 ORTHO05D007370 5.8e-29 132.5 100 72.0
ClCG04G009400 Citrullus lanatus HOM05D005435 ORTHO05D007370 7.6e-29 132.1 99 69.7
CsaV3_6G039980 Cucumis sativus L. HOM05D005435 ORTHO05D007370 7.6e-29 132.1 99 69.7
Cfa017616 Carpinus fangiana HOM05D005435 ORTHO05D007370 9.9e-29 131.7 100 68.0
Oeu022974.1 Olea europaea HOM05D005435 ORTHO05D007370 9.9e-29 131.7 100 72.0
Gohir.A01G141700 Gossypium hirsutum HOM05D005435 ORTHO05D007370 1.3e-28 131.3 100 69.0
Potri.006G124400 Populus trichocarpa HOM05D005435 ORTHO05D007370 1.3e-28 131.3 100 70.0
Sed0000088 Sechium edule HOM05D005435 ORTHO05D007370 1.3e-28 131.3 99 70.7
Aqoxy2G01759 Aquilegia oxysepala HOM05D005435 ORTHO05D007370 1.7e-28 131.0 100 71.0
CANSAT80G1523 Cannabis sativa HOM05D005435 ORTHO05D007370 2.2e-28 130.6 100 70.0
Duzib093G0272 Durio zibethinus HOM05D005435 ORTHO05D007370 2.2e-28 130.6 100 69.0
Migut.J01655 Erythranthe guttata HOM05D005435 ORTHO05D007370 2.2e-28 130.6 100 69.0
MD04G1093200 Malus domestica HOM05D005435 ORTHO05D007370 2.2e-28 130.6 100 71.0
Medtr7g101940 Medicago truncatula HOM05D005435 ORTHO05D007370 2.2e-28 130.6 100 67.0
TPR.G32806 Trifolium pratense HOM05D005435 ORTHO05D007370 2.2e-28 130.6 99 68.7
Gohir.D01G130500 Gossypium hirsutum HOM05D005435 ORTHO05D007370 3.8e-28 129.8 100 68.0
Gorai.002G161900 Gossypium raimondii HOM05D005435 ORTHO05D007370 3.8e-28 129.8 100 68.0
vmacro16401 Vaccinium macrocarpon HOM05D005435 ORTHO05D007370 3.8e-28 129.8 100 67.0
CSS0000486 Camellia sinensis var. sinensis HOM05D005435 ORTHO05D007370 4.9e-28 129.4 100 68.0
Ca_08861_v3 Cicer arietinum L. HOM05D005435 ORTHO05D007370 4.9e-28 129.4 100 66.0
HanXRQChr14g0454441 Helianthus annuus HOM05D005435 ORTHO05D007370 4.9e-28 129.4 100 67.0
Lj1g0010500 Lotus japonicus HOM05D005435 ORTHO05D007370 4.9e-28 129.4 100 67.0
Manes.09G066100 Manihot esculenta HOM05D005435 ORTHO05D007370 4.9e-28 129.4 100 70.0
Sc20g0005470 Simmondsia chinensis HOM05D005435 ORTHO05D007370 1.1e-27 128.3 99 66.7
CiPaw.09G172100 Carya illinoinensis HOM05D005435 ORTHO05D007370 1.4e-27 127.9 100 67.0
MSTRG.10790 Avicennia marina HOM05D005435 ORTHO05D007370 1.9e-27 127.5 100 66.0
Lalb_Chr01g0018691 Lupinus albus HOM05D005435 ORTHO05D007370 1.9e-27 127.5 100 64.0
DCAR_017682 Daucus carota HOM05D005435 ORTHO05D007370 2.4e-27 127.1 100 65.0
Thecc.05G067100 Theobroma cacao HOM05D005435 ORTHO05D007370 2.4e-27 127.1 100 68.0
Glyma.03G183400 Glycine max HOM05D005435 ORTHO05D007370 3.2e-27 126.7 100 65.0
QL07p043246 Quercus lobata HOM05D005435 ORTHO05D007370 3.2e-27 126.7 99 67.7
ECA238G1020 Erigeron canadensis HOM05D005435 ORTHO05D007370 5.4e-27 125.9 100 66.0
Phvul.001G179200 Phaseolus vulgaris HOM05D005435 ORTHO05D007370 5.4e-27 125.9 100 64.0
PGR142G0097 Punica granatum HOM05D005435 ORTHO05D007370 5.4e-27 125.9 100 65.0
EL10Ac7g16635 Beta vulgaris HOM05D005435 ORTHO05D007370 7.1e-27 125.6 99 64.6
Psat3g042640 Pisum sativum HOM05D005435 ORTHO05D007370 7.1e-27 125.6 99 66.7
A08p24260 Brassica napus HOM05D005435 ORTHO05D007370 1.6e-26 124.4 100 64.0
BraA08t34381Z Brassica rapa HOM05D005435 ORTHO05D007370 1.6e-26 124.4 100 64.0
AL6G12730 Arabidopsis lyrata HOM05D005435 ORTHO05D007370 2.1e-26 124.0 100 62.0
Carub.0005s1195 Capsella rubella HOM05D005435 ORTHO05D007370 2.1e-26 124.0 100 62.0
SalBow6G0607 Salvia bowleyana HOM05D005435 ORTHO05D007370 2.1e-26 124.0 100 64.0
Sp7g12050 Schrenkiella parvula HOM05D005435 ORTHO05D007370 2.1e-26 124.0 100 64.0
Actinidia33394 Actinidia chinensis HOM05D005435 ORTHO05D007370 2.7e-26 123.6 100 68.0
Ah.08g211610 Amaranthus hybridus HOM05D005435 ORTHO05D007370 2.7e-26 123.6 99 64.6
AT3G46100 Arabidopsis thaliana HOM05D005435 ORTHO05D007370 2.7e-26 123.6 100 62.0
Rhsim12G0137200 Rhododendron simsii HOM05D005435 ORTHO05D007370 2.7e-26 123.6 100 65.0
BcaC01g00217 Brassica carinata HOM05D005435 ORTHO05D007370 4.6e-26 122.9 100 63.0
C03p77020 Brassica napus HOM05D005435 ORTHO05D007370 4.6e-26 122.9 100 63.0
AUR62014241 Chenopodium quinoa HOM05D005435 ORTHO05D007370 4.6e-26 122.9 99 64.6
PSO017G6300 Papaver somniferum HOM05D005435 ORTHO05D007370 4.6e-26 122.9 100 65.0
CAN.G501.3 Capsicum annuum HOM05D000107 ORTHO05D000062 6.0e-26 122.5 96 64.6
CARHR209940 Cardamine hirsuta HOM05D005435 ORTHO05D007370 6.0e-26 122.5 100 61.0
Nn2g13788 Nelumbo nucifera HOM05D002509 ORTHO05D002758 7.9e-26 122.1 89 73.0
VMungo1383G0425 Vigna mungo HOM05D005435 ORTHO05D007370 7.9e-26 122.1 100 63.0
arahy.Tifrunner.gnm1.ann1.2UY3HI Arachis hypogaea HOM05D005435 ORTHO05D007370 1.0e-25 121.7 99 62.6
PSO063G1591 Papaver somniferum HOM05D005435 ORTHO05D007370 1.0e-25 121.7 100 64.0
BcaNung05574 Brassica carinata HOM05D005435 ORTHO05D007370 1.8e-25 120.9 100 63.0
Hund20359 Selenicereus undatus HOM05D005435 ORTHO05D007370 1.8e-25 120.9 100 64.0
arahy.Tifrunner.gnm1.ann1.3ZC2I8 Arachis hypogaea HOM05D005435 ORTHO05D007370 2.3e-25 120.6 99 61.6
THA.LOC104826914 Tarenaya hassleriana HOM05D005435 ORTHO05D007370 2.3e-25 120.6 99 61.6
AUR62038499 Chenopodium quinoa HOM05D005435 ORTHO05D007370 5.1e-25 119.4 99 61.6
BolC3t19955H Brassica oleracea HOM05D005435 ORTHO05D007370 8.7e-25 118.6 100 62.0
Lsat_1_v5_gn_2_123940 Lactuca sativa HOM05D005435 ORTHO05D007370 4.3e-24 116.3 93 67.7
CAN.G1104.1 Capsicum annuum HOM05D022282 ORTHO05D017747 7.4e-24 115.5 74 75.7
CAN.G2483.1 Capsicum annuum HOM05D022282 ORTHO05D017747 7.4e-24 115.5 74 75.7
Aa31LG1G21750 Aethionema arabicum HOM05D005435 ORTHO05D007370 9.6e-24 115.2 120 50.8
CAN.G324.18 Capsicum annuum HOM05D000107 ORTHO05D000062 1.6e-23 114.4 77 71.4
SGA_v2.0_scaffold105G30289 Striga asiatica HOM05D005435 ORTHO05D007370 4.5e-21 106.3 80 70.0
CAN.G172.3 Capsicum annuum HOM05D022282 ORTHO05D017747 6.4e-20 102.4 127 47.2
C04p41650 Brassica napus HOM05D005435 ORTHO05D042799 1.1e-19 101.7 91 58.2
BolC4t25744H Brassica oleracea HOM05D005435 ORTHO05D042799 1.1e-19 101.7 91 58.2
CDE10G0836 Ceratophyllum demersum HOM05D005435 ORTHO05D007370 5.5e-19 99.4 100 53.0
unitig_899.g15642 Utricularia gibba HOM05D005435 ORTHO05D007370 5.5e-19 99.4 100 55.0
ATR1132G102 Amborella trichopoda HOM05D005435 ORTHO05D007370 2.1e-18 97.4 100 54.0
Zm00001eb122020 Zea mays HOM05D005435 ORTHO05D007370 6.0e-18 95.9 100 53.0
Os02g0754700 Oryza sativa ssp. japonica HOM05D005435 ORTHO05D007370 7.9e-18 95.5 100 55.0
Ciclev10013900m.g Citrus clementina HOM05D005435 ORTHO05D007370 3.9e-17 93.2 68 76.5
AL5G24810 Arabidopsis lyrata HOM05D005435 ORTHO05D007370 3.3e-16 90.1 68 69.1
Solyc11g044933.1 Solanum lycopersicum HOM05D000107 ORTHO05D000062 9.0e-14 82.0 77 53.2
Cpa.g.c35476 Carica papaya HOM05D005435 ORTHO05D007370 2.0e-13 80.9 54 72.2
HPP92_007175 Vanilla planifolia HOM05D005435 ORTHO05D007370 2.6e-13 80.5 99 48.5
CAN.G125.23 Capsicum annuum HOM05D000107 ORTHO05D000062 2.9e-12 77.0 77 50.6
AagrBONN_evm.TU.Sc2ySwM_117.1380 Anthoceros agrestis HOM05D005435 ORTHO05D007370 2.5e-11 73.9 99 37.4
Sopen11g015850 Solanum pennellii HOM05D000107 ORTHO05D000062 5.5e-11 72.8 72 50.0
SMO201G0114 Selaginella moellendorffii HOM05D000113 ORTHO05D001108 2.5e-08 63.9 99 36.4
SMO268G0040 Selaginella moellendorffii HOM05D005435 ORTHO05D007370 2.5e-08 63.9 99 36.4
CBR_g45330 Chara braunii HOM05D005435 ORTHO05D007370 5.7e-08 62.8 106 31.1
MCO12G364 Micromonas commoda HOM05D005435 ORTHO05D007370 1.6e-07 61.2 102 33.3
CSS0030493 Camellia sinensis var. sinensis HOM05D005435 ORTHO05D007370 2.8e-07 60.5 46 65.2
SEGI_25418 Sequoiadendron giganteum HOM05D005435 ORTHO05D007370 6.3e-07 59.3 67 46.3
MCO02G110 Micromonas commoda HOM05D005435 ORTHO05D007370 8.2e-07 58.9 91 34.1
Pp3c7_24050 Physcomitrium patens HOM05D005435 ORTHO05D007370 5.3e-06 56.2 100 35.0


User provided reference genes

Program Settings