Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G868.8 Capsicum annuum HOM05D000862 ORTHO05D003588 1.2e-39 166.0 80 100.0
PGSC0003DMG400041736 Solanum tuberosum HOM05D000862 ORTHO05D003588 1.3e-17 92.8 70 65.7
CAN.G575.18 Capsicum annuum HOM05D000862 ORTHO05D003588 9.1e-16 86.7 68 57.4
Peaxi162Scf00062g01918 Petunia axillaris HOM05D000862 ORTHO05D003588 5.0e-14 80.9 68 60.3
CAN.G749.24 Capsicum annuum HOM05D000862 ORTHO05D003588 6.5e-14 80.5 68 54.4
CAN.G749.20 Capsicum annuum HOM05D000862 ORTHO05D003588 8.5e-14 80.1 68 55.9
Nitab4.5_0001124g0110 Nicotiana tabacum HOM05D000862 ORTHO05D003588 2.5e-13 78.6 78 55.1
PGSC0003DMG400041018 Solanum tuberosum HOM05D000862 ORTHO05D003588 2.1e-12 75.5 76 59.2
Nitab4.5_0000798g0040 Nicotiana tabacum HOM05D000862 ORTHO05D003588 3.6e-12 74.7 58 62.1
CAN.G749.18 Capsicum annuum HOM05D000862 ORTHO05D003588 6.1e-12 73.9 58 55.2
Solyc09g083030.1 Solanum lycopersicum HOM05D000862 ORTHO05D003588 8.0e-12 73.6 63 50.8
Sopen09g031900 Solanum pennellii HOM05D000862 ORTHO05D003588 8.0e-12 73.6 63 50.8
Nitab4.5_0000941g0010 Nicotiana tabacum HOM05D000862 ORTHO05D003588 1.4e-11 72.8 73 47.9
Nitab4.5_0009547g0010 Nicotiana tabacum HOM05D000862 ORTHO05D003588 1.8e-11 72.4 67 53.7
PGSC0003DMG400006100 Solanum tuberosum HOM05D000862 ORTHO05D003588 4.0e-11 71.2 66 50.0
Migut.N00044 Erythranthe guttata HOM05D000862 ORTHO05D003588 6.7e-11 70.5 68 48.5
Sopen09g031890 Solanum pennellii HOM05D000862 ORTHO05D003588 6.7e-11 70.5 68 48.5
PGSC0003DMG400006098 Solanum tuberosum HOM05D000862 ORTHO05D003588 6.7e-11 70.5 68 50.0
Rhsim04G0236500 Rhododendron simsii HOM05D000862 ORTHO05D003588 8.8e-11 70.1 70 47.1
Nitab4.5_0001787g0070 Nicotiana tabacum HOM05D000862 ORTHO05D003588 2.0e-10 68.9 58 58.6
CAN.G575.17 Capsicum annuum HOM05D000966 ORTHO05D002384 2.6e-10 68.6 75 52.0
CAN.G749.17 Capsicum annuum HOM05D000002 ORTHO05D003588 2.6e-10 68.6 68 48.5
Lsat_1_v5_gn_6_18420 Lactuca sativa HOM05D008029 ORTHO05D003588 4.4e-10 67.8 68 44.1
SGA_v2.0_scaffold480G52303 Striga asiatica HOM05D000862 ORTHO05D003588 7.5e-10 67.0 67 46.3
Rhsim04G0236200 Rhododendron simsii HOM05D000862 ORTHO05D003588 9.7e-10 66.6 66 48.5
Nitab4.5_0012347g0020 Nicotiana tabacum HOM05D000862 ORTHO05D003588 1.3e-09 66.2 68 52.9
Rhsim04G0237600 Rhododendron simsii HOM05D000862 ORTHO05D003588 1.3e-09 66.2 72 41.7
PGSC0003DMG400043196 Solanum tuberosum HOM05D000862 ORTHO05D003588 1.3e-09 66.2 68 51.5
Actinidia13361 Actinidia chinensis HOM05D000862 ORTHO05D003588 1.7e-09 65.9 73 41.1
Solyc09g083020.1 Solanum lycopersicum HOM05D000862 ORTHO05D003588 1.7e-09 65.9 66 47.0
Nitab4.5_0001124g0040 Nicotiana tabacum HOM05D000862 ORTHO05D003588 2.8e-09 65.1 58 56.9
MSTRG.21770 Avicennia marina HOM05D000862 ORTHO05D003588 3.7e-09 64.7 66 47.0
Dinv15179 Davidia involucrata HOM05D000862 ORTHO05D003588 3.7e-09 64.7 75 42.7
Nitab4.5_0001124g0060 Nicotiana tabacum HOM05D000862 ORTHO05D003588 4.8e-09 64.3 58 56.9
Nitab4.5_0001787g0050 Nicotiana tabacum HOM05D000862 ORTHO05D003588 1.1e-08 63.2 56 53.6
Duzib151G0999 Durio zibethinus HOM05D000862 ORTHO05D003588 1.4e-08 62.8 66 47.0
Rhsim04G0236900 Rhododendron simsii HOM05D000862 ORTHO05D003588 1.8e-08 62.4 57 47.4
Peaxi162Scf01044g00232 Petunia axillaris HOM05D000862 ORTHO05D003588 7.0e-08 60.5 54 51.9
CSS0039572 Camellia sinensis var. sinensis HOM05D000862 ORTHO05D003588 1.2e-07 59.7 61 45.9
CSS0022415 Camellia sinensis var. sinensis HOM05D000862 ORTHO05D003588 1.6e-07 59.3 63 42.9
Oeu016489.1 Olea europaea HOM05D007843 ORTHO05D003639 1.6e-07 59.3 67 43.3
Rhsim04G0238100 Rhododendron simsii HOM05D000862 ORTHO05D003588 1.6e-07 59.3 57 45.6
vmacro08049 Vaccinium macrocarpon HOM05D000862 ORTHO05D003588 1.6e-07 59.3 58 50.0
Nitab4.5_0000941g0040 Nicotiana tabacum HOM05D000862 ORTHO05D003588 2.0e-07 58.9 58 44.8
CSS0029865 Camellia sinensis var. sinensis HOM05D000862 ORTHO05D003588 2.7e-07 58.5 71 46.5
CSS0034808 Camellia sinensis var. sinensis HOM05D000862 ORTHO05D003588 2.7e-07 58.5 71 46.5
Nitab4.5_0012347g0030 Nicotiana tabacum HOM05D000862 ORTHO05D003588 3.5e-07 58.2 69 40.6
DCAR_011947 Daucus carota HOM05D000862 ORTHO05D003588 4.5e-07 57.8 66 45.5
Nitab4.5_0001124g0070 Nicotiana tabacum HOM05D000862 ORTHO05D003588 5.9e-07 57.4 46 58.7
Actinidia13362 Actinidia chinensis HOM05D005742 ORTHO05D001888 1.3e-06 56.2 57 43.9
EL10Ac3g05500 Beta vulgaris HOM05D008029 ORTHO05D003588 1.7e-06 55.8 57 45.6
CSS0042531 Camellia sinensis var. sinensis HOM05D000862 ORTHO05D003588 1.7e-06 55.8 71 42.3
Peaxi162Scf00441g00622 Petunia axillaris HOM05D000862 ORTHO05D003588 1.7e-06 55.8 70 42.9
EL10Ac3g05501 Beta vulgaris HOM05D008029 ORTHO05D003588 2.2e-06 55.5 79 40.5
Thhalv10009313m.g Eutrema salsugineum HOM05D008029 ORTHO05D003588 2.2e-06 55.5 68 42.6
Peaxi162Scf00788g00022 Petunia axillaris HOM05D008029 ORTHO05D003588 2.2e-06 55.5 56 50.0
AL4G42570 Arabidopsis lyrata HOM05D008029 ORTHO05D003588 2.9e-06 55.1 72 37.5
CAN.G749.25 Capsicum annuum HOM05D000862 ORTHO05D003588 2.9e-06 55.1 56 42.9
ECA233G3755 Erigeron canadensis HOM05D000862 ORTHO05D003588 2.9e-06 55.1 68 42.6
Dinv15175 Davidia involucrata HOM05D000862 ORTHO05D003588 5.0e-06 54.3 71 39.4
Lsat_1_v5_gn_6_18400 Lactuca sativa HOM05D000862 ORTHO05D003588 5.0e-06 54.3 67 41.8
AL4G42580 Arabidopsis lyrata HOM05D008029 ORTHO05D003588 6.5e-06 53.9 64 35.9
CSS0041630 Camellia sinensis var. sinensis HOM05D000862 ORTHO05D003588 6.5e-06 53.9 71 42.3
Rhsim02G0004300 Rhododendron simsii HOM05D000862 ORTHO05D003588 6.5e-06 53.9 68 41.2
vmacro08050 Vaccinium macrocarpon HOM05D000862 ORTHO05D003588 8.5e-06 53.5 57 45.6


User provided reference genes

Program Settings