Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G867.6 Capsicum annuum HOM05D004973 ORTHO05D006119 2.4e-99 365.9 252 100.0
CAN.G867.2 Capsicum annuum HOM05D004973 ORTHO05D006119 1.4e-65 253.8 216 69.4
Nitab4.5_0000202g0430 Nicotiana tabacum HOM05D004973 ORTHO05D006119 5.9e-61 238.4 282 55.3
Nitab4.5_0016310g0010 Nicotiana tabacum HOM05D004973 ORTHO05D006119 1.4e-54 217.2 282 52.8
PGSC0003DMG400011051 Solanum tuberosum HOM05D004973 ORTHO05D006119 1.7e-52 210.3 261 58.2
Nitab4.5_0000643g0210 Nicotiana tabacum HOM05D004973 ORTHO05D006119 1.2e-48 197.6 257 52.1
Peaxi162Scf00597g00824 Petunia axillaris HOM05D004973 ORTHO05D006119 9.1e-46 188.0 257 50.6
Peaxi162Scf00472g00079 Petunia axillaris HOM05D004973 ORTHO05D006119 1.9e-43 180.3 265 47.5
Solyc10g084420.2 Solanum lycopersicum HOM05D004973 ORTHO05D006119 2.3e-41 173.3 256 51.6
Sopen10g033860 Solanum pennellii HOM05D004973 ORTHO05D006119 9.8e-40 167.9 258 50.4
Nitab4.5_0007045g0010 Nicotiana tabacum HOM05D004973 ORTHO05D006119 3.6e-34 149.4 220 49.1
Dinv37236 Davidia involucrata HOM05D004973 ORTHO05D006119 1.3e-23 114.4 268 36.6
Hma1.2p1_0111F.1_g053560 Hydrangea macrophylla HOM05D004973 ORTHO05D006119 4.9e-23 112.5 264 37.1
Thecc.05G050500 Theobroma cacao HOM05D004973 ORTHO05D006119 3.2e-22 109.8 260 38.5
Dinv35683 Davidia involucrata HOM05D004973 ORTHO05D006119 7.0e-22 108.6 265 40.0
Oeu029113.1 Olea europaea HOM05D004973 ORTHO05D006119 2.7e-21 106.7 254 36.2
CSS0037973 Camellia sinensis var. sinensis HOM05D004973 ORTHO05D006119 3.0e-20 103.2 268 36.9
Cc06_g03330 Coffea canephora HOM05D004973 ORTHO05D006119 3.9e-20 102.8 301 34.6
Haze_20682 Corylus avellana HOM05D004973 ORTHO05D006119 3.9e-20 102.8 266 40.2
Migut.L01647 Erythranthe guttata HOM05D004973 ORTHO05D006119 6.6e-20 102.1 283 32.5
Manes.08G000800 Manihot esculenta HOM05D004973 ORTHO05D006119 8.6e-20 101.7 260 34.6
CAN.G608.34 Capsicum annuum HOM05D004973 ORTHO05D006119 1.1e-19 101.3 229 40.2
Gorai.006G177300 Gossypium raimondii HOM05D004973 ORTHO05D006119 5.6e-19 99.0 256 34.0
Gohir.A04G077600 Gossypium hirsutum HOM05D004973 ORTHO05D006119 6.2e-18 95.5 251 43.0
Ciclev10012401m.g Citrus clementina HOM05D004973 ORTHO05D006119 8.0e-18 95.1 257 33.1
Migut.J00395 Erythranthe guttata HOM05D004973 ORTHO05D006119 8.0e-18 95.1 260 31.9
Gohir.D04G116800 Gossypium hirsutum HOM05D004973 ORTHO05D006119 8.0e-18 95.1 250 40.8
Gohir.A09G160200 Gossypium hirsutum HOM05D004973 ORTHO05D006119 1.1e-17 94.7 245 34.3
Oeu060067.1 Olea europaea HOM05D004973 ORTHO05D006119 1.8e-17 94.0 299 34.1
GSVIVG01025573001 Vitis vinifera HOM05D004973 ORTHO05D009107 5.2e-17 92.4 253 34.8
CSS0008181 Camellia sinensis var. sinensis HOM05D004973 ORTHO05D006119 6.8e-17 92.0 260 34.6
Potri.006G216300 Populus trichocarpa HOM05D004973 ORTHO05D006119 1.2e-16 91.3 266 35.7
Manes.09G071500 Manihot esculenta HOM05D004973 ORTHO05D006119 1.5e-16 90.9 254 33.5
MSTRG.10290 Avicennia marina HOM05D004973 ORTHO05D006119 2.0e-16 90.5 318 33.0
QL07p045858 Quercus lobata HOM05D004973 ORTHO05D006119 2.0e-16 90.5 271 32.5
Gorai.009G421700 Gossypium raimondii HOM05D004973 ORTHO05D006119 2.6e-16 90.1 247 40.9
Lj3A975T70 Lonicera japonica HOM05D004973 ORTHO05D006119 3.4e-16 89.7 262 35.9
Sabra06G0166700 Salix brachista HOM05D004973 ORTHO05D006119 1.7e-15 87.4 269 32.3
COL.COLO4_10304 Corchorus olitorius HOM05D004973 ORTHO05D006119 2.2e-15 87.0 255 30.2
CSS0000366 Camellia sinensis var. sinensis HOM05D004973 ORTHO05D006119 2.9e-15 86.7 260 33.5
vmacro20083 Vaccinium macrocarpon HOM05D004973 ORTHO05D006119 2.9e-15 86.7 241 37.8
PGSC0003DMG400002023 Solanum tuberosum HOM05D004973 ORTHO05D006119 1.1e-14 84.7 80 61.2
PGSC0003DMG400018718 Solanum tuberosum HOM05D004973 ORTHO05D006119 1.1e-14 84.7 78 61.5
DCAR_017742 Daucus carota HOM05D004973 ORTHO05D006119 3.2e-14 83.2 266 29.3
HanXRQChr07g0195961 Helianthus annuus HOM05D004973 ORTHO05D006119 7.1e-14 82.0 268 29.9
Cpa.g.sc114.29 Carica papaya HOM05D004973 ORTHO05D006119 2.1e-13 80.5 258 32.6
CiPaw.09G185000 Carya illinoinensis HOM05D004973 ORTHO05D006119 2.7e-13 80.1 267 33.0
SGA_v2.0_scaffold35G14182 Striga asiatica HOM05D004973 ORTHO05D006119 6.0e-13 79.0 275 35.3
MSTRG.26739 Avicennia marina HOM05D004973 ORTHO05D006119 1.0e-12 78.2 310 33.5
Gohir.D09G155800 Gossypium hirsutum HOM05D004973 ORTHO05D006119 1.0e-12 78.2 56 73.2
Eucgr.A01206 Eucalyptus grandis HOM05D004973 ORTHO05D006119 1.3e-12 77.8 255 31.4
FAN09G0990 Fragaria x ananassa HOM05D004973 ORTHO05D006119 1.3e-12 77.8 269 30.1
HanXRQChr14g0453421 Helianthus annuus HOM05D004973 ORTHO05D006119 1.3e-12 77.8 250 31.2
FAN14G1622 Fragaria x ananassa HOM05D004973 ORTHO05D006119 2.3e-12 77.0 269 29.4
Glyma.10G047400 Glycine max HOM05D004973 ORTHO05D006119 8.6e-12 75.1 276 29.0
RhsimUnG0120800 Rhododendron simsii HOM05D004973 ORTHO05D006119 1.5e-11 74.3 59 61.0
FAN05G3543 Fragaria x ananassa HOM05D004973 ORTHO05D006119 1.9e-11 73.9 269 30.5
TAR623G0749 Trochodendron aralioides HOM05D004973 ORTHO05D006119 1.9e-11 73.9 56 71.4
arahy.Tifrunner.gnm1.ann1.C8BSPY Arachis hypogaea HOM05D004973 ORTHO05D006119 2.5e-11 73.6 277 30.3
CiPaw.10G138900 Carya illinoinensis HOM05D004973 ORTHO05D006119 2.5e-11 73.6 306 27.8
Nn2g12943 Nelumbo nucifera HOM05D004973 ORTHO05D006119 4.3e-11 72.8 268 32.8
RcHm_v2.0_Chr3g0468111 Rosa chinensis HOM05D004973 ORTHO05D006119 4.3e-11 72.8 56 67.9
Medtr1g067220 Medicago truncatula HOM05D004973 ORTHO05D006119 7.3e-11 72.0 250 29.6
FvH4_6g14910 Fragaria vesca HOM05D004973 ORTHO05D006119 9.5e-11 71.6 55 67.3
FAN02G2240 Fragaria x ananassa HOM05D004973 ORTHO05D006119 1.6e-10 70.9 56 66.1
ECA238G2925 Erigeron canadensis HOM05D004973 ORTHO05D006119 2.1e-10 70.5 277 30.7
TWI53G0396 Tripterygium wilfordii HOM05D004973 ORTHO05D006119 2.1e-10 70.5 56 67.9
Actinidia19731 Actinidia chinensis HOM05D004973 ORTHO05D006119 3.6e-10 69.7 274 29.2
CsaV3_4G024460 Cucumis sativus L. HOM05D004973 ORTHO05D006119 4.7e-10 69.3 56 62.5
Prupe.6G245100 Prunus persica HOM05D004973 ORTHO05D009107 6.2e-10 68.9 271 32.8
MELO3C003079.2 Cucumis melo HOM05D004973 ORTHO05D006119 1.1e-09 68.2 56 60.7
Glyma.19G176500 Glycine max HOM05D004973 ORTHO05D006119 1.1e-09 68.2 56 66.1
MD04G1111000 Malus domestica HOM05D004973 ORTHO05D006119 1.1e-09 68.2 50 72.0
Nn2g10587 Nelumbo nucifera HOM05D004973 ORTHO05D006119 1.1e-09 68.2 56 60.7
PGR004G2597 Punica granatum HOM05D004973 ORTHO05D006119 1.1e-09 68.2 55 61.8
AL4G33680 Arabidopsis lyrata HOM05D004973 ORTHO05D006119 1.8e-09 67.4 55 65.5
arahy.Tifrunner.gnm1.ann1.P2DQEA Arachis hypogaea HOM05D004973 ORTHO05D006119 1.8e-09 67.4 277 29.2
Glyma.03G176000 Glycine max HOM05D004973 ORTHO05D006119 1.8e-09 67.4 56 66.1
Lj2A104T80 Lonicera japonica HOM05D004973 ORTHO05D006119 1.8e-09 67.4 52 71.2
Phvul.007G161600 Phaseolus vulgaris HOM05D004973 ORTHO05D006119 1.8e-09 67.4 263 34.2
Atru.chr8.2512 Acer truncatum HOM05D004973 ORTHO05D006119 3.1e-09 66.6 56 64.3
ClCG04G008700 Citrullus lanatus HOM05D004973 ORTHO05D006119 3.1e-09 66.6 56 60.7
Potri.016G082700 Populus trichocarpa HOM05D004973 ORTHO05D006119 3.1e-09 66.6 225 33.8
Carub.0004s1921 Capsella rubella HOM05D004973 ORTHO05D006119 4.0e-09 66.2 59 64.4
PSO384G3176 Papaver somniferum HOM05D004973 ORTHO05D006119 5.2e-09 65.9 56 62.5
A03p20600 Brassica napus HOM05D000861 ORTHO05D001799 6.8e-09 65.5 55 63.6
MBI05_g16176_MAGBIO Magnolia biondii HOM05D004973 ORTHO05D006119 6.8e-09 65.5 53 64.2
VMungo0720G0246 Vigna mungo HOM05D004973 ORTHO05D006119 6.8e-09 65.5 305 27.9
AT2G37300 Arabidopsis thaliana HOM05D004973 ORTHO05D006119 8.9e-09 65.1 55 63.6
BcaNung06612 Brassica carinata HOM05D004973 ORTHO05D006119 8.9e-09 65.1 55 61.8
MD12G1129800 Malus domestica HOM05D004973 ORTHO05D006119 8.9e-09 65.1 256 33.6
Sp4g19620 Schrenkiella parvula HOM05D004973 ORTHO05D006119 8.9e-09 65.1 55 63.6
BraA03t11302Z Brassica rapa HOM05D000861 ORTHO05D001799 1.2e-08 64.7 55 63.6
Lsat_1_v5_gn_2_110141 Lactuca sativa HOM05D004973 ORTHO05D006119 1.2e-08 64.7 268 33.2
Thhalv10017275m.g Eutrema salsugineum HOM05D004973 ORTHO05D006119 1.5e-08 64.3 58 63.8
SalBow4G1465 Salvia bowleyana HOM05D004973 ORTHO05D006119 1.5e-08 64.3 323 26.3
CANSAT80G1895 Cannabis sativa HOM05D004973 ORTHO05D006119 2.0e-08 63.9 258 31.8
A05p08610 Brassica napus HOM05D004973 ORTHO05D006119 2.6e-08 63.5 51 66.7
Hund12070 Selenicereus undatus HOM05D004973 ORTHO05D006119 2.6e-08 63.5 259 29.7
MSTRG.19121 Avicennia marina HOM05D004973 ORTHO05D006119 3.4e-08 63.2 56 60.7
C03p24200 Brassica napus HOM05D000861 ORTHO05D001799 5.8e-08 62.4 53 64.2
BolC3t14814H Brassica oleracea HOM05D004973 ORTHO05D006119 5.8e-08 62.4 53 64.2
Sed0025194 Sechium edule HOM05D004973 ORTHO05D006119 5.8e-08 62.4 48 66.7
THA.LOC104823441 Tarenaya hassleriana HOM05D004973 ORTHO05D006119 5.8e-08 62.4 57 66.7
Os03g0283400 Oryza sativa ssp. japonica HOM05D004973 ORTHO05D006119 7.6e-08 62.0 50 66.0
BcaNung06611 Brassica carinata HOM05D004973 ORTHO05D006119 1.3e-07 61.2 55 58.2
C04p65800 Brassica napus HOM05D004973 ORTHO05D006119 1.3e-07 61.2 55 58.2
BolC4t28082H Brassica oleracea HOM05D004973 ORTHO05D006119 1.3e-07 61.2 55 58.2
Lj5g0023317 Lotus japonicus HOM05D004973 ORTHO05D006119 1.3e-07 61.2 257 28.8
Psat6g069760 Pisum sativum HOM05D004973 ORTHO05D006119 1.3e-07 61.2 51 64.7
EL10Ac7g17266 Beta vulgaris HOM05D004973 ORTHO05D006119 1.7e-07 60.8 257 33.1
BcaC02g07519 Brassica carinata HOM05D004973 ORTHO05D006119 2.2e-07 60.5 51 64.7
A04p28480 Brassica napus HOM05D004973 ORTHO05D006119 2.2e-07 60.5 55 56.4
C04p10700 Brassica napus HOM05D004973 ORTHO05D006119 3.7e-07 59.7 51 62.7
BraA04t18326Z Brassica rapa HOM05D004973 ORTHO05D006119 4.9e-07 59.3 55 56.4
DCAR_014954 Daucus carota HOM05D000267 ORTHO05D000298 6.4e-07 58.9 284 31.0
Zm00001eb012960 Zea mays HOM05D004973 ORTHO05D006119 8.3e-07 58.5 50 64.0
Lalb_Chr06g0171201 Lupinus albus HOM05D004973 ORTHO05D006119 1.1e-06 58.2 51 60.8
TPR.G35656 Trifolium pratense HOM05D004973 ORTHO05D006119 1.1e-06 58.2 51 62.7
VMungo1383G2298 Vigna mungo HOM05D004973 ORTHO05D006119 1.1e-06 58.2 55 60.0
CARHR132290 Cardamine hirsuta HOM05D004973 ORTHO05D006119 1.4e-06 57.8 49 65.3
Eucgr.K03187 Eucalyptus grandis HOM05D004973 ORTHO05D006119 1.9e-06 57.4 247 28.7
Sc01g0003720 Simmondsia chinensis HOM05D004973 ORTHO05D006119 1.9e-06 57.4 260 28.5
unitig_60.g25816 Utricularia gibba HOM05D004973 ORTHO05D006119 1.9e-06 57.4 47 63.8
THA.LOC104805339 Tarenaya hassleriana HOM05D004973 ORTHO05D006119 2.4e-06 57.0 55 60.0
RhsimUnG0120900 Rhododendron simsii HOM05D004973 ORTHO05D006119 7.1e-06 55.5 38 73.7


User provided reference genes

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