Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G861.45 Capsicum annuum HOM05D005506 ORTHO05D004172 2.8e-44 181.4 84 100.0
CAN.G1308.1 Capsicum annuum HOM05D005506 ORTHO05D004172 7.8e-34 146.7 83 80.7
CAN.G1127.3 Capsicum annuum HOM05D001217 ORTHO05D004172 3.3e-32 141.4 83 79.5
CAN.G66.2 Capsicum annuum HOM05D005506 ORTHO05D004172 9.5e-32 139.8 83 83.1
CAN.G1038.18 Capsicum annuum HOM05D005506 ORTHO05D004172 1.1e-30 136.3 83 77.1
CAN.G1199.8 Capsicum annuum HOM05D005506 ORTHO05D004172 6.8e-30 133.7 83 77.1
CAN.G1937.1 Capsicum annuum HOM05D005506 ORTHO05D004172 7.5e-29 130.2 79 79.7
CAN.G809.55 Capsicum annuum HOM05D005506 ORTHO05D004172 2.7e-26 121.7 73 78.1
CAN.G156.11 Capsicum annuum HOM05D005506 ORTHO05D004172 6.0e-26 120.6 78 74.4
CAN.G129.2 Capsicum annuum HOM05D005506 ORTHO05D004172 3.0e-25 118.2 83 68.7
CAN.G520.8 Capsicum annuum HOM05D005506 ORTHO05D004172 7.3e-24 113.6 67 80.6
CAN.G767.51 Capsicum annuum HOM05D005506 ORTHO05D004172 4.7e-23 110.9 57 87.7
CAN.G92.27 Capsicum annuum HOM05D005506 ORTHO05D004172 4.1e-19 97.8 67 68.7
CAN.G513.3 Capsicum annuum HOM05D005506 ORTHO05D004172 2.1e-18 95.5 74 62.2
PGSC0003DMG400036799 Solanum tuberosum HOM05D005506 ORTHO05D004172 2.1e-18 95.5 81 56.8
CAN.G126.52 Capsicum annuum HOM05D005506 ORTHO05D004172 6.0e-18 94.0 60 73.3
CAN.G1612.5 Capsicum annuum HOM05D005506 ORTHO05D004172 7.8e-18 93.6 81 58.0
CAN.G78.32 Capsicum annuum HOM05D005506 ORTHO05D004172 1.3e-17 92.8 75 57.3
CAN.G1298.5 Capsicum annuum HOM05D005506 ORTHO05D004172 1.7e-17 92.4 57 75.4
PGSC0003DMG400047226 Solanum tuberosum HOM05D005506 ORTHO05D004172 2.3e-17 92.0 78 59.0
Sopen02g009890 Solanum pennellii HOM05D005506 ORTHO05D004172 8.6e-17 90.1 77 57.1
CAN.G371.20 Capsicum annuum HOM05D005506 ORTHO05D004172 1.1e-16 89.7 79 55.7
PGSC0003DMG400038069 Solanum tuberosum HOM05D000017 ORTHO05D004172 1.5e-16 89.4 81 50.6
CAN.G733.8 Capsicum annuum HOM05D005506 ORTHO05D004172 3.3e-16 88.2 57 71.9
PGSC0003DMG400009624 Solanum tuberosum HOM05D000017 ORTHO05D000013 5.6e-16 87.4 81 50.6
CAN.G1235.4 Capsicum annuum HOM05D000638 ORTHO05D000801 1.4e-14 82.8 81 50.6
CAN.G989.1 Capsicum annuum HOM05D005506 ORTHO05D004172 3.1e-14 81.6 81 51.9
CAN.G1177.2 Capsicum annuum HOM05D005506 ORTHO05D004172 8.9e-14 80.1 43 81.4
PGSC0003DMG401009023 Solanum tuberosum HOM05D000017 ORTHO05D000013 1.2e-13 79.7 75 50.7
CAN.G170.72 Capsicum annuum HOM05D000327 ORTHO05D000218 1.5e-13 79.3 77 51.9
CAN.G1056.16 Capsicum annuum HOM05D005506 ORTHO05D004172 2.0e-13 79.0 50 76.0
CAN.G170.30 Capsicum annuum HOM05D011038 ORTHO05D004172 1.7e-12 75.9 81 48.1
CAN.G248.41 Capsicum annuum HOM05D005506 ORTHO05D004172 3.8e-12 74.7 78 50.0
CAN.G1251.8 Capsicum annuum HOM05D005506 ORTHO05D004172 4.9e-12 74.3 77 53.2
Sopen09g013570 Solanum pennellii HOM05D000017 ORTHO05D004172 4.9e-12 74.3 81 43.2
CAN.G159.11 Capsicum annuum HOM05D005506 ORTHO05D004172 6.4e-12 73.9 59 57.6
CAN.G2548.1 Capsicum annuum HOM05D005506 ORTHO05D004172 8.4e-12 73.6 77 53.2
CAN.G153.9 Capsicum annuum HOM05D005506 ORTHO05D004172 1.4e-11 72.8 63 54.0
CAN.G1014.53 Capsicum annuum HOM05D000261 ORTHO05D004172 1.9e-11 72.4 61 57.4
Nitab4.5_0000204g0100 Nicotiana tabacum HOM05D005506 ORTHO05D004172 1.9e-11 72.4 78 43.6
CAN.G101.1 Capsicum annuum HOM05D005506 ORTHO05D004172 3.2e-11 71.6 49 69.4
CAN.G22.18 Capsicum annuum HOM05D005506 ORTHO05D004172 2.1e-10 68.9 58 56.9
CAN.G801.2 Capsicum annuum HOM05D005506 ORTHO05D004172 1.3e-09 66.2 36 86.1
CAN.G134.131 Capsicum annuum HOM05D005506 ORTHO05D004172 1.1e-08 63.2 58 56.9
CAN.G65.25 Capsicum annuum HOM05D005506 ORTHO05D004172 7.3e-08 60.5 36 75.0
THA.LOC104810610 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.6e-07 59.3 79 39.2
Oeu000550.1 Olea europaea HOM05D000017 ORTHO05D000013 2.8e-07 58.5 74 37.8
CAN.G194.25 Capsicum annuum HOM05D005506 ORTHO05D004172 4.7e-07 57.8 54 50.0
Oeu057223.1 Olea europaea HOM05D000017 ORTHO05D000013 4.7e-07 57.8 74 37.8
THA.LOC109116550 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 4.7e-07 57.8 82 35.4
CAN.G695.1 Capsicum annuum HOM05D005506 ORTHO05D004172 6.2e-07 57.4 42 61.9
Oeu055600.1 Olea europaea HOM05D000017 ORTHO05D000013 6.2e-07 57.4 74 36.5
CANSAT21G0561 Cannabis sativa HOM05D000017 ORTHO05D000013 8.1e-07 57.0 73 38.4
CANSAT56G3039 Cannabis sativa HOM05D000017 ORTHO05D000013 8.1e-07 57.0 73 38.4
THA.LOC104800036 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.1e-06 56.6 80 35.0
CANSAT56G4124 Cannabis sativa HOM05D000017 ORTHO05D000013 1.4e-06 56.2 71 39.4
THA.LOC104801856 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.4e-06 56.2 74 35.1
THA.LOC104824926 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.4e-06 56.2 74 35.1
BolC5t32183H Brassica oleracea HOM05D008389 ORTHO05D000013 1.8e-06 55.8 82 34.1
Nitab4.5_0006234g0030 Nicotiana tabacum HOM05D005506 ORTHO05D004172 1.8e-06 55.8 54 46.3
CANSAT01G1754 Cannabis sativa HOM05D000017 ORTHO05D000013 2.4e-06 55.5 71 39.4
CANSAT01G2716 Cannabis sativa HOM05D000017 ORTHO05D000013 2.4e-06 55.5 71 39.4
Atru.chr2.1645 Acer truncatum HOM05D000017 ORTHO05D000013 4.0e-06 54.7 81 32.1
CAN.G1214.10 Capsicum annuum HOM05D005506 ORTHO05D004172 4.0e-06 54.7 41 58.5
Nn3g19930 Nelumbo nucifera HOM05D000017 ORTHO05D000013 4.0e-06 54.7 74 32.4
BolC9t57659H Brassica oleracea HOM05D008389 ORTHO05D000013 5.2e-06 54.3 79 35.4
CANSAT01G0624 Cannabis sativa HOM05D000017 ORTHO05D000013 5.2e-06 54.3 71 36.6
CANSAT11G2678 Cannabis sativa HOM05D000017 ORTHO05D000013 5.2e-06 54.3 71 36.6
CANSAT21G0758 Cannabis sativa HOM05D000017 ORTHO05D000013 5.2e-06 54.3 71 36.6
CANSAT35G0343 Cannabis sativa HOM05D000017 ORTHO05D000013 5.2e-06 54.3 71 36.6
THA.LOC104801857 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 5.2e-06 54.3 74 35.1
THA.LOC104825704 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 5.2e-06 54.3 74 35.1
Atru.chr1.2149 Acer truncatum HOM05D000017 ORTHO05D000013 6.9e-06 53.9 81 32.1
CANSAT78G0358 Cannabis sativa HOM05D000017 ORTHO05D000013 6.9e-06 53.9 75 32.0
Oeu008255.1 Olea europaea HOM05D000017 ORTHO05D000013 6.9e-06 53.9 71 36.6
Oeu059292.1 Olea europaea HOM05D000017 ORTHO05D000013 6.9e-06 53.9 74 36.5
THA.LOC104800336 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 6.9e-06 53.9 78 35.9
CANSAT11G0935 Cannabis sativa HOM05D000017 ORTHO05D000013 9.0e-06 53.5 71 38.0
CANSAT35G0303 Cannabis sativa HOM05D000017 ORTHO05D000013 9.0e-06 53.5 73 35.6
Sopen12g002860 Solanum pennellii HOM05D000017 ORTHO05D000013 9.0e-06 53.5 72 34.7
THA.LOC104807849 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 9.0e-06 53.5 74 36.5


User provided reference genes

Program Settings