Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G857.11 Capsicum annuum HOM05D006852 ORTHO05D008585 9.2e-136 486.9 244 100.0
PGSC0003DMG400030817 Solanum tuberosum HOM05D006852 ORTHO05D008585 4.2e-112 408.3 282 75.9
Solyc04g074660.3 Solanum lycopersicum HOM05D006852 ORTHO05D008585 2.3e-110 402.5 282 75.2
Sopen04g029630 Solanum pennellii HOM05D006852 ORTHO05D008585 1.5e-109 399.8 282 74.5
Nitab4.5_0000125g0260 Nicotiana tabacum HOM05D006852 ORTHO05D008585 4.8e-108 394.8 249 81.9
Peaxi162Scf00339g00115 Petunia axillaris HOM05D006852 ORTHO05D008585 2.0e-106 389.4 229 85.6
Nitab4.5_0006579g0050 Nicotiana tabacum HOM05D006852 ORTHO05D008585 1.4e-104 383.3 249 79.5
Dinv09352 Davidia involucrata HOM05D006852 ORTHO05D008585 1.3e-94 350.1 247 74.1
Hma1.2p1_0293F.1_g116040 Hydrangea macrophylla HOM05D006852 ORTHO05D008585 1.1e-91 340.5 247 71.3
Potri.001G266200 Populus trichocarpa HOM05D006852 ORTHO05D008585 2.6e-90 335.9 245 71.0
CiPaw.14G000200 Carya illinoinensis HOM05D006852 ORTHO05D008585 5.8e-90 334.7 247 71.3
Cfa010769 Carpinus fangiana HOM05D006852 ORTHO05D008585 7.6e-90 334.3 246 71.5
ECA248G0614 Erigeron canadensis HOM05D006852 ORTHO05D008585 1.4e-88 330.1 244 70.9
Duzib138G0005 Durio zibethinus HOM05D006852 ORTHO05D008585 2.5e-88 329.3 248 70.6
Eucgr.G03378 Eucalyptus grandis HOM05D006852 ORTHO05D008585 1.2e-87 327.0 258 67.8
Oeu010800.1 Olea europaea HOM05D006852 ORTHO05D008585 4.6e-87 325.1 168 90.5
COL.COLO4_31169 Corchorus olitorius HOM05D006852 ORTHO05D008585 6.0e-87 324.7 183 84.7
Manes.07G006500 Manihot esculenta HOM05D006852 ORTHO05D008585 7.9e-87 324.3 247 70.4
Lj3g0018236 Lotus japonicus HOM05D006852 ORTHO05D008585 1.0e-86 323.9 247 68.8
Actinidia31067 Actinidia chinensis HOM05D006852 ORTHO05D008585 1.3e-86 323.6 179 87.2
Glyma.13G202400 Glycine max HOM05D006852 ORTHO05D008585 3.0e-86 322.4 247 67.2
HanXRQChr01g0015721 Helianthus annuus HOM05D006852 ORTHO05D008585 3.0e-86 322.4 245 67.3
Prupe.2G014400 Prunus persica HOM05D006852 ORTHO05D008585 3.0e-86 322.4 180 86.1
Atru.chr11.2623 Acer truncatum HOM05D006852 ORTHO05D008585 5.1e-86 321.6 316 57.0
Gorai.004G172200 Gossypium raimondii HOM05D006852 ORTHO05D008585 8.7e-86 320.9 178 86.0
Gohir.A08G144200 Gossypium hirsutum HOM05D006852 ORTHO05D008585 1.1e-85 320.5 251 68.9
Thecc.01G410400 Theobroma cacao HOM05D006852 ORTHO05D008585 1.1e-85 320.5 248 69.8
arahy.Tifrunner.gnm1.ann1.5TR8MX Arachis hypogaea HOM05D006852 ORTHO05D008585 2.5e-85 319.3 204 76.0
EL10Ac2g04333 Beta vulgaris HOM05D006852 ORTHO05D008585 3.3e-85 318.9 305 56.7
Nn7g36210 Nelumbo nucifera HOM05D006852 ORTHO05D008585 4.3e-85 318.5 246 67.9
Gohir.D08G165200 Gossypium hirsutum HOM05D006852 ORTHO05D008585 5.7e-85 318.2 178 85.4
Ciclev10032186m.g Citrus clementina HOM05D006852 ORTHO05D008585 7.4e-85 317.8 183 83.6
Phvul.011G211400 Phaseolus vulgaris HOM05D006852 ORTHO05D008585 7.4e-85 317.8 180 83.3
Glyma.12G236900 Glycine max HOM05D006852 ORTHO05D008585 1.3e-84 317.0 182 81.9
Lalb_Chr03g0034091 Lupinus albus HOM05D006852 ORTHO05D008585 2.8e-84 315.8 180 82.2
MD07G1011200 Malus domestica HOM05D006852 ORTHO05D008585 3.7e-84 315.5 250 68.4
THA.LOC104801980 Tarenaya hassleriana HOM05D006852 ORTHO05D008585 3.7e-84 315.5 248 68.1
PSO384G4724 Papaver somniferum HOM05D006852 ORTHO05D008585 4.8e-84 315.1 279 62.0
PSO339G6046 Papaver somniferum HOM05D006852 ORTHO05D008585 1.1e-83 313.9 279 60.9
Lsat_1_v5_gn_1_106940 Lactuca sativa HOM05D006852 ORTHO05D008585 1.8e-83 313.2 245 66.1
MELO3C023552.2 Cucumis melo HOM05D006852 ORTHO05D008585 3.1e-83 312.4 247 67.6
RcHm_v2.0_Chr1g0316111 Rosa chinensis HOM05D006852 ORTHO05D008585 1.2e-82 310.5 247 66.8
Sed0010309 Sechium edule HOM05D006852 ORTHO05D008585 1.5e-82 310.1 244 65.6
FvH4_7g01110 Fragaria vesca HOM05D006852 ORTHO05D008585 4.5e-82 308.5 246 64.2
Rhsim07G0056000 Rhododendron simsii HOM05D006852 ORTHO05D008585 7.6e-82 307.8 179 83.2
vmacro13669 Vaccinium macrocarpon HOM05D006852 ORTHO05D008585 7.6e-82 307.8 300 59.3
CsaV3_7G031040 Cucumis sativus L. HOM05D006852 ORTHO05D008585 1.0e-81 307.4 256 64.8
FAN06G4754 Fragaria x ananassa HOM05D006852 ORTHO05D008585 1.4e-80 303.5 248 63.7
Psat4g148920 Pisum sativum HOM05D006852 ORTHO05D008585 1.4e-80 303.5 250 65.2
QL04p006320 Quercus lobata HOM05D006852 ORTHO05D008585 1.4e-80 303.5 278 60.8
Medtr8g037265 Medicago truncatula HOM05D006852 ORTHO05D008585 4.2e-80 302.0 249 65.1
TWI79G0862 Tripterygium wilfordii HOM05D006852 ORTHO05D008585 5.5e-80 301.6 249 63.9
CANSAT80G1911 Cannabis sativa HOM05D006852 ORTHO05D008585 9.4e-80 300.8 178 79.2
unitig_747.g22049 Utricularia gibba HOM05D006852 ORTHO05D008585 9.4e-80 300.8 247 64.4
ATR0332G098 Amborella trichopoda HOM05D006852 ORTHO05D008585 1.2e-79 300.4 243 64.6
Thhalv10026084m.g Eutrema salsugineum HOM05D006852 ORTHO05D008585 2.7e-79 299.3 243 63.4
SEGI_37436 Sequoiadendron giganteum HOM05D006852 ORTHO05D008585 3.6e-79 298.9 257 63.4
HPP92_009588 Vanilla planifolia HOM05D006852 ORTHO05D008585 6.1e-79 298.1 244 62.7
Carub.0007s2707 Capsella rubella HOM05D006852 ORTHO05D008585 7.9e-79 297.7 245 63.3
ClCG09G004140 Citrullus lanatus HOM05D006852 ORTHO05D008585 1.0e-78 297.4 168 82.1
Aqoxy1G00289 Aquilegia oxysepala HOM05D006852 ORTHO05D008585 1.1e-77 293.9 244 63.1
FAN03G0769 Fragaria x ananassa HOM05D006852 ORTHO05D008585 1.5e-77 293.5 302 57.3
PGR031G2977 Punica granatum HOM05D006852 ORTHO05D008585 1.5e-77 293.5 255 63.5
Zm00001eb115340 Zea mays HOM05D006852 ORTHO05D008585 1.5e-77 293.5 263 60.1
Sc10g0000090 Simmondsia chinensis HOM05D006852 ORTHO05D008585 5.7e-77 291.6 267 58.1
CARHR221730 Cardamine hirsuta HOM05D006852 ORTHO05D008585 9.7e-77 290.8 243 61.3
Sp7g13213 Schrenkiella parvula HOM05D006852 ORTHO05D008585 9.7e-77 290.8 243 60.9
AUR62023069 Chenopodium quinoa HOM05D006852 ORTHO05D008585 1.3e-76 290.4 318 50.3
FAN01G0182 Fragaria x ananassa HOM05D006852 ORTHO05D008585 1.3e-76 290.4 169 81.7
FAN10G4066 Fragaria x ananassa HOM05D006852 ORTHO05D008585 1.3e-76 290.4 170 81.2
AL7G40800 Arabidopsis lyrata HOM05D006852 ORTHO05D008585 2.2e-76 289.7 275 56.4
AT4G15030 Arabidopsis thaliana HOM05D006852 ORTHO05D008585 6.3e-76 288.1 275 55.6
BolC1t02738H Brassica oleracea HOM05D006852 ORTHO05D008585 6.3e-76 288.1 251 59.0
Sabra16G0163300 Salix brachista HOM05D006852 ORTHO05D008585 6.3e-76 288.1 271 60.1
BcaNung00310 Brassica carinata HOM05D006852 ORTHO05D008585 1.1e-75 287.3 243 61.7
BcaC09g50182 Brassica carinata HOM05D006852 ORTHO05D008585 1.4e-75 287.0 243 60.5
C01p28040 Brassica napus HOM05D006852 ORTHO05D008585 6.9e-75 284.6 243 59.7
A01p22510 Brassica napus HOM05D006852 ORTHO05D008585 9.1e-75 284.3 243 59.7
Cc02_g28030 Coffea canephora HOM05D006852 ORTHO05D008585 1.4e-72 276.9 148 85.1
Aa31LG9G2320 Aethionema arabicum HOM05D006852 ORTHO05D008585 4.7e-71 271.9 274 55.5
Ah.10g038820 Amaranthus hybridus HOM05D006852 ORTHO05D008585 1.4e-70 270.4 212 64.6
Os11g0639000 Oryza sativa ssp. japonica HOM05D006852 ORTHO05D008585 3.0e-70 269.2 169 72.8
VMungo1127G1814 Vigna mungo HOM05D006852 ORTHO05D008585 1.1e-69 267.3 145 84.1
TPR.G1866 Trifolium pratense HOM05D006852 ORTHO05D008585 3.3e-69 265.8 150 82.0
Mapoly0009s0102 Marchantia polymorpha HOM05D006852 ORTHO05D008585 1.4e-67 260.4 180 68.3
SGA_v2.0_scaffold161G37817 Striga asiatica HOM05D006852 ORTHO05D008585 1.4e-67 260.4 235 61.3
BraA01t02166Z Brassica rapa HOM05D006852 ORTHO05D008585 9.1e-67 257.7 308 47.7
TAR633G0701 Trochodendron aralioides HOM05D006852 ORTHO05D008585 2.2e-65 253.1 193 65.3
AUR62009387 Chenopodium quinoa HOM05D006852 ORTHO05D008585 6.5e-65 251.5 236 59.7
SHI04066 Sapria himalayana HOM05D006852 ORTHO05D008585 1.2e-63 247.3 248 57.7
Hund18974 Selenicereus undatus HOM05D006852 ORTHO05D008585 8.0e-63 244.6 398 42.5
AagrBONN_evm.TU.Sc2ySwM_228.2602 Anthoceros agrestis HOM05D006852 ORTHO05D008585 3.9e-62 242.3 260 53.1
CSS0037243 Camellia sinensis var. sinensis HOM05D006852 ORTHO05D008585 1.7e-60 236.9 284 52.8
SalBow6G4338 Salvia bowleyana HOM05D006852 ORTHO05D008585 3.7e-60 235.7 267 50.6
Pp3c2_10540 Physcomitrium patens HOM05D006852 ORTHO05D008585 1.8e-59 233.4 255 51.0
MBI04_g36071_MAGBIO Magnolia biondii HOM05D006852 ORTHO05D008585 2.6e-58 229.6 248 56.5
CSS0019030 Camellia sinensis var. sinensis HOM05D006852 ORTHO05D008585 5.0e-57 225.3 256 55.9
Hma1.2p1_0293F.1_g116050 Hydrangea macrophylla HOM05D006852 ORTHO05D008585 8.5e-57 224.6 125 83.2
SalBow6G3774 Salvia bowleyana HOM05D006852 ORTHO05D008585 3.2e-56 222.6 131 78.6
arahy.Tifrunner.gnm1.ann1.2WG9D2 Arachis hypogaea HOM05D006852 ORTHO05D008585 1.8e-54 216.9 367 38.7
Haze_03202 Corylus avellana HOM05D006852 ORTHO05D008585 5.2e-54 215.3 154 70.1
Oeu049501.1 Olea europaea HOM05D006852 ORTHO05D008585 3.7e-52 209.1 115 86.1
Cre07.g336250 Chlamydomonas reinhardtii HOM05D006852 ORTHO05D008585 3.1e-51 206.1 193 53.9
Migut.N01601 Erythranthe guttata HOM05D006852 ORTHO05D008585 3.7e-44 182.6 98 85.7
GSVIVG01032100001 Vitis vinifera HOM05D006852 ORTHO05D008585 6.3e-44 181.8 170 61.2
MD02G1310300 Malus domestica HOM05D006852 ORTHO05D008585 6.8e-38 161.8 145 60.7
CBR_g4609 Chara braunii HOM05D006852 ORTHO05D008585 8.9e-38 161.4 169 52.1
SMO239G0058 Selaginella moellendorffii HOM05D006852 ORTHO05D008585 2.0e-37 160.2 114 64.9
CDE02G4017 Ceratophyllum demersum HOM05D006852 ORTHO05D008585 1.9e-32 143.7 81 81.5
QL11p002033 Quercus lobata HOM05D006852 ORTHO05D008585 1.9e-24 117.1 107 57.9
QL11p001483 Quercus lobata HOM05D000005 ORTHO05D000012 9.2e-19 98.2 112 50.0
QL11p002055 Quercus lobata HOM05D006852 ORTHO05D008585 3.3e-16 89.7 163 38.7
C03p92530 Brassica napus HOM05D006852 ORTHO05D008585 8.9e-14 81.6 120 41.7
Cc02_g28050 Coffea canephora HOM05D006852 ORTHO05D008585 2.7e-10 70.1 102 51.0
Migut.N01602 Erythranthe guttata HOM05D006852 ORTHO05D008585 7.3e-08 62.0 34 88.2
Ca_23889_v3 Cicer arietinum L. HOM05D006852 ORTHO05D008585 4.7e-07 59.3 29 89.7


User provided reference genes

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