Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G855.51 Capsicum annuum HOM05D006009 ORTHO05D007389 8.3e-192 673.7 380 100.0
Solyc01g103040.4 Solanum lycopersicum HOM05D006009 ORTHO05D007389 5.2e-170 601.3 371 88.7
Sopen01g045450 Solanum pennellii HOM05D006009 ORTHO05D007389 1.5e-164 583.2 371 89.2
Nitab4.5_0002261g0040 Nicotiana tabacum HOM05D006009 ORTHO05D007389 7.5e-161 570.9 371 84.4
Nitab4.5_0005110g0010 Nicotiana tabacum HOM05D006009 ORTHO05D007389 3.0e-157 558.9 389 80.5
Peaxi162Scf00011g01924 Petunia axillaris HOM05D006009 ORTHO05D007389 2.4e-138 496.1 374 76.2
Dinv29632 Davidia involucrata HOM05D006009 ORTHO05D007389 5.6e-124 448.4 372 69.6
CSS0016468 Camellia sinensis var. sinensis HOM05D006009 ORTHO05D007389 9.0e-122 441.0 372 68.5
Lj5C283T7 Lonicera japonica HOM05D006009 ORTHO05D007389 8.4e-120 434.5 398 64.3
COL.COLO4_31132 Corchorus olitorius HOM05D006009 ORTHO05D007389 2.5e-119 433.0 377 65.5
Hma1.2p1_0052F.1_g030000 Hydrangea macrophylla HOM05D006009 ORTHO05D007389 1.3e-117 427.2 372 66.9
QL02p103325 Quercus lobata HOM05D006009 ORTHO05D007389 2.5e-116 422.9 373 63.5
Actinidia00150 Actinidia chinensis HOM05D006009 ORTHO05D007389 1.4e-114 417.2 370 64.9
Cfa004445 Carpinus fangiana HOM05D006009 ORTHO05D007389 1.5e-113 413.7 372 62.4
Haze_09985 Corylus avellana HOM05D006009 ORTHO05D007389 7.7e-113 411.4 372 62.6
Atru.chr6.240 Acer truncatum HOM05D006009 ORTHO05D007389 8.5e-112 407.9 385 62.3
Thecc.06G017900 Theobroma cacao HOM05D006009 ORTHO05D007389 1.1e-111 407.5 376 62.8
Duzib160G0440 Durio zibethinus HOM05D006009 ORTHO05D007389 2.7e-110 402.9 376 61.7
Rhsim11G0117900 Rhododendron simsii HOM05D006009 ORTHO05D007389 3.6e-110 402.5 401 59.6
RcHm_v2.0_Chr7g0219751 Rosa chinensis HOM05D006009 ORTHO05D007389 3.6e-110 402.5 374 62.8
SGA_v2.0_scaffold131G34411 Striga asiatica HOM05D006009 ORTHO05D007389 3.0e-109 399.4 380 62.1
Lsat_1_v5_gn_5_104280 Lactuca sativa HOM05D006009 ORTHO05D007389 3.9e-109 399.1 371 59.8
HanXRQChr10g0301411 Helianthus annuus HOM05D006009 ORTHO05D007389 4.3e-108 395.6 369 60.2
Eucgr.I02796 Eucalyptus grandis HOM05D006009 ORTHO05D007389 7.4e-108 394.8 374 61.2
Manes.10G107000 Manihot esculenta HOM05D006009 ORTHO05D007389 2.2e-107 393.3 373 61.7
CiPaw.05G001600 Carya illinoinensis HOM05D006009 ORTHO05D007389 6.3e-107 391.7 371 60.6
ECA234G2369 Erigeron canadensis HOM05D006009 ORTHO05D007389 8.2e-107 391.3 371 60.4
FvH4_5g27851 Fragaria vesca HOM05D006009 ORTHO05D007389 9.1e-106 387.9 379 60.2
TAR628G0644 Trochodendron aralioides HOM05D006009 ORTHO05D007389 3.4e-105 386.0 373 63.5
Cc02_g23590 Coffea canephora HOM05D006009 ORTHO05D007389 4.5e-105 385.6 378 60.3
Ciclev10000419m.g Citrus clementina HOM05D006009 ORTHO05D007389 1.0e-104 384.4 375 58.9
GSVIVG01023148001 Vitis vinifera HOM05D006009 ORTHO05D007389 1.0e-104 384.4 370 62.4
FAN08G0569 Fragaria x ananassa HOM05D006009 ORTHO05D007389 3.2e-103 379.4 389 58.1
Phvul.003G076200 Phaseolus vulgaris HOM05D006009 ORTHO05D007389 2.1e-102 376.7 370 57.8
PGR142G3497 Punica granatum HOM05D006009 ORTHO05D007389 3.6e-102 375.9 377 59.4
Migut.B00722 Erythranthe guttata HOM05D006009 ORTHO05D007389 7.9e-102 374.8 382 57.6
Manes.10G106700 Manihot esculenta HOM05D006009 ORTHO05D007389 1.4e-101 374.0 373 59.5
PSO017G1873 Papaver somniferum HOM05D006009 ORTHO05D007389 3.9e-101 372.5 373 59.5
Ca_13530_v3 Cicer arietinum L. HOM05D006009 ORTHO05D007389 6.7e-101 371.7 370 57.3
Gohir.D06G150100 Gossypium hirsutum HOM05D006009 ORTHO05D007389 8.8e-101 371.3 377 60.7
THA.LOC104806651 Tarenaya hassleriana HOM05D006009 ORTHO05D007389 2.0e-100 370.2 380 57.9
Thhalv10012797m.g Eutrema salsugineum HOM05D006009 ORTHO05D007389 3.3e-100 369.4 378 57.7
DCAR_001725 Daucus carota HOM05D006009 ORTHO05D007389 5.7e-100 368.6 375 61.6
AL8G23820 Arabidopsis lyrata HOM05D006009 ORTHO05D007389 1.8e-98 363.6 376 56.4
Sp6g11340 Schrenkiella parvula HOM05D006009 ORTHO05D007389 3.1e-98 362.8 378 57.1
AT5G49880 Arabidopsis thaliana HOM05D006009 ORTHO05D007389 5.3e-98 362.1 379 56.7
MSTRG.16468 Avicennia marina HOM05D006009 ORTHO05D007389 5.3e-98 362.1 350 60.6
TPR.G5949 Trifolium pratense HOM05D006009 ORTHO05D007389 7.0e-98 361.7 372 56.7
CARHR258850 Cardamine hirsuta HOM05D006009 ORTHO05D007389 9.1e-98 361.3 372 56.7
BcaB08g35360 Brassica carinata HOM05D006009 ORTHO05D007389 1.5e-97 360.5 374 57.8
vmacro01680 Vaccinium macrocarpon HOM05D006009 ORTHO05D007389 1.5e-97 360.5 372 58.6
Carub.0008s0974 Capsella rubella HOM05D006009 ORTHO05D007389 2.6e-97 359.8 378 56.3
Sc03g0005770 Simmondsia chinensis HOM05D006009 ORTHO05D007389 1.0e-96 357.8 372 56.7
FAN18G4220 Fragaria x ananassa HOM05D006009 ORTHO05D007389 3.8e-96 355.9 407 53.8
Psat4g001000 Pisum sativum HOM05D006009 ORTHO05D007389 5.0e-96 355.5 374 54.5
Gorai.010G175200 Gossypium raimondii HOM05D006009 ORTHO05D007389 1.1e-95 354.4 378 59.8
ClCG11G000290 Citrullus lanatus HOM05D006009 ORTHO05D007389 2.5e-95 353.2 380 55.3
TWI59G1011 Tripterygium wilfordii HOM05D006009 ORTHO05D007389 3.2e-95 352.8 343 61.2
Potri.003G000900 Populus trichocarpa HOM05D006009 ORTHO05D007389 4.2e-95 352.4 379 56.5
Lalb_Chr12g0195841 Lupinus albus HOM05D006009 ORTHO05D007389 5.5e-95 352.1 370 55.9
MD15G1442900 Malus domestica HOM05D006009 ORTHO05D007389 7.2e-95 351.7 374 56.4
MD08G1248100 Malus domestica HOM05D006009 ORTHO05D007389 4.7e-94 349.0 374 57.5
Sabra03G0000300 Salix brachista HOM05D006009 ORTHO05D007389 6.1e-94 348.6 379 56.2
arahy.Tifrunner.gnm1.ann1.AUD1A6 Arachis hypogaea HOM05D006009 ORTHO05D007389 1.0e-93 347.8 333 58.9
BraSC37t46134Z Brassica rapa HOM05D006009 ORTHO05D007389 1.8e-93 347.1 376 57.2
arahy.Tifrunner.gnm1.ann1.WHZ4K1 Arachis hypogaea HOM05D006009 ORTHO05D007389 3.0e-93 346.3 334 59.0
Glyma.17G001700 Glycine max HOM05D006009 ORTHO05D007389 1.5e-92 344.0 368 56.2
CANSAT01G0444 Cannabis sativa HOM05D006009 ORTHO05D007389 5.7e-92 342.0 380 53.9
CsaV3_5G037180 Cucumis sativus L. HOM05D006009 ORTHO05D007389 5.7e-92 342.0 380 54.5
FAN04G2183 Fragaria x ananassa HOM05D006009 ORTHO05D007389 1.8e-90 337.0 376 55.3
PSO170G2218 Papaver somniferum HOM05D006009 ORTHO05D007389 1.8e-90 337.0 373 58.7
Aqoxy6G00035 Aquilegia oxysepala HOM05D006009 ORTHO05D007389 5.3e-90 335.5 358 56.1
MELO3C022930.2 Cucumis melo HOM05D006009 ORTHO05D007389 5.3e-90 335.5 380 54.2
Glyma.07G272700 Glycine max HOM05D006009 ORTHO05D007389 1.2e-89 334.3 370 54.6
Gohir.A06G144400 Gossypium hirsutum HOM05D006009 ORTHO05D007389 2.0e-89 333.6 377 57.6
Lj4g0014586 Lotus japonicus HOM05D006009 ORTHO05D007389 2.0e-89 333.6 373 53.6
MBI03_g05191_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 2.6e-89 333.2 378 55.0
A10p08680 Brassica napus HOM05D006009 ORTHO05D007389 2.2e-88 330.1 376 55.3
Medtr4g134640 Medicago truncatula HOM05D006009 ORTHO05D007389 1.9e-87 327.0 368 51.9
Prupe.1G585300 Prunus persica HOM05D006009 ORTHO05D007389 7.2e-87 325.1 321 60.7
Ah.03g136790 Amaranthus hybridus HOM05D006009 ORTHO05D007389 1.6e-86 323.9 374 52.1
BcaC04g20834 Brassica carinata HOM05D006009 ORTHO05D007389 5.2e-85 318.9 374 53.5
unitig_8.g4550 Utricularia gibba HOM05D006009 ORTHO05D007389 8.8e-85 318.2 322 58.1
Sed0013076 Sechium edule HOM05D006009 ORTHO05D007389 1.5e-84 317.4 370 53.5
C09p38660 Brassica napus HOM05D006009 ORTHO05D007389 6.3e-83 312.0 376 53.5
BolC9t56722H Brassica oleracea HOM05D006009 ORTHO05D007389 6.3e-83 312.0 376 53.5
Aa31sc62G20 Aethionema arabicum HOM05D006009 ORTHO05D007389 1.8e-82 310.5 372 52.7
Nn5g27199 Nelumbo nucifera HOM05D006009 ORTHO05D007389 7.0e-82 308.5 374 54.0
EL10Ac6g13997 Beta vulgaris HOM05D006009 ORTHO05D007389 1.2e-81 307.8 392 51.0
AUR62042641 Chenopodium quinoa HOM05D006009 ORTHO05D007389 1.5e-76 290.8 395 50.9
ATR1089G153 Amborella trichopoda HOM05D006009 ORTHO05D007389 2.9e-72 276.6 372 47.6
Cpa.g.sc173.20 Carica papaya HOM05D006009 ORTHO05D007389 2.1e-70 270.4 373 48.3
Potri.004G228900 Populus trichocarpa HOM05D006009 ORTHO05D007389 5.2e-69 265.8 376 47.3
AUR62032470 Chenopodium quinoa HOM05D006009 ORTHO05D007389 2.5e-63 246.9 375 47.5
Sabra01G0173900 Salix brachista HOM05D006009 ORTHO05D007389 7.3e-63 245.4 434 42.4
Zm00001eb145920 Zea mays HOM05D006009 ORTHO05D007389 6.8e-61 238.8 387 43.7
Oeu028480.1 Olea europaea HOM05D006009 ORTHO05D007389 8.9e-61 238.4 218 62.8
Os01g0877300 Oryza sativa ssp. japonica HOM05D006009 ORTHO05D007389 2.6e-60 236.9 377 42.7
HPP92_003614 Vanilla planifolia HOM05D006009 ORTHO05D007389 2.2e-59 233.8 371 41.5
Oeu043610.2 Olea europaea HOM05D006009 ORTHO05D007389 1.2e-52 211.5 262 51.5
CDE05G2940 Ceratophyllum demersum HOM05D006009 ORTHO05D007389 7.3e-47 192.2 224 49.6
AagrBONN_evm.TU.Sc2ySwM_228.1218 Anthoceros agrestis HOM05D006009 ORTHO05D007389 1.2e-33 148.3 388 33.5
Pp3c17_20400 Physcomitrium patens HOM05D006009 ORTHO05D007389 3.9e-32 143.3 330 34.2
Mapoly0034s0031 Marchantia polymorpha HOM05D006009 ORTHO05D007389 2.8e-30 137.1 346 29.8
SHI05061 Sapria himalayana HOM05D000030 ORTHO05D000009 8.1e-30 135.6 498 30.5
CBR_g38734 Chara braunii HOM05D006009 ORTHO05D007389 2.1e-25 120.9 329 27.7
Oeu028483.1 Olea europaea HOM05D006009 ORTHO05D007389 3.9e-24 116.7 99 66.7
SEGI_26370 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 2.4e-21 107.5 124 51.6
Hund15371 Selenicereus undatus HOM05D006009 ORTHO05D007389 3.8e-19 100.1 184 42.4
SMO343G0014 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 2.7e-17 94.0 348 26.7
Glyma.14G105500 Glycine max HOM05D006009 ORTHO05D007389 2.8e-14 84.0 70 61.4
QL08p014094 Quercus lobata HOM05D006009 ORTHO05D007389 4.8e-14 83.2 107 48.6
SEGI_01187 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 6.5e-11 72.8 154 35.1
MD15G1442500 Malus domestica HOM05D006009 ORTHO05D007389 2.1e-06 57.8 45 55.6


User provided reference genes

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