Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G855.45 Capsicum annuum HOM05D006686 ORTHO05D008463 1.9e-275 951.8 468 100.0
PGSC0003DMG402024871 Solanum tuberosum HOM05D006686 ORTHO05D008463 9.1e-249 863.2 468 90.6
Solyc01g103110.3 Solanum lycopersicum HOM05D006686 ORTHO05D008463 3.0e-244 848.2 468 89.1
Sopen01g045530 Solanum pennellii HOM05D006686 ORTHO05D008463 2.0e-243 845.5 468 88.9
Nitab4.5_0001057g0120 Nicotiana tabacum HOM05D006686 ORTHO05D008463 6.1e-237 823.9 472 86.4
Nitab4.5_0001129g0010 Nicotiana tabacum HOM05D006686 ORTHO05D008463 1.8e-236 822.4 471 86.6
Peaxi162Scf00011g01843 Petunia axillaris HOM05D006686 ORTHO05D008463 2.2e-223 778.9 449 85.5
Dinv29673 Davidia involucrata HOM05D006686 ORTHO05D008463 1.3e-202 709.9 457 75.5
CSS0008654 Camellia sinensis var. sinensis HOM05D006686 ORTHO05D008463 2.3e-199 699.1 471 72.2
Migut.B00728 Erythranthe guttata HOM05D006686 ORTHO05D008463 3.9e-199 698.4 459 73.6
DCAR_022282 Daucus carota HOM05D006686 ORTHO05D008463 2.6e-195 685.6 459 73.2
MSTRG.16472 Avicennia marina HOM05D006686 ORTHO05D008463 2.9e-194 682.2 461 71.6
GSVIVG01023154001 Vitis vinifera HOM05D006686 ORTHO05D008463 1.9e-193 679.5 466 71.0
Cfa004450 Carpinus fangiana HOM05D006686 ORTHO05D008463 2.4e-193 679.1 466 71.7
Cc02_g23500 Coffea canephora HOM05D006686 ORTHO05D008463 1.6e-192 676.4 460 71.1
QL02p103152 Quercus lobata HOM05D006686 ORTHO05D008463 1.6e-192 676.4 467 70.2
vmacro19835 Vaccinium macrocarpon HOM05D006686 ORTHO05D008463 2.7e-192 675.6 448 73.2
Sabra01G0173400 Salix brachista HOM05D006686 ORTHO05D008463 3.9e-191 671.8 453 71.5
Potri.004G228500 Populus trichocarpa HOM05D006686 ORTHO05D008463 6.6e-191 671.0 455 71.9
SGA_v2.0_scaffold254G45251 Striga asiatica HOM05D006686 ORTHO05D008463 8.6e-191 670.6 447 72.3
Thecc.06G000500 Theobroma cacao HOM05D006686 ORTHO05D008463 8.6e-191 670.6 456 72.4
ECA236G4971 Erigeron canadensis HOM05D006686 ORTHO05D008463 1.9e-190 669.5 471 70.7
Manes.07G028500 Manihot esculenta HOM05D006686 ORTHO05D008463 1.9e-190 669.5 456 71.7
CANSAT01G1449 Cannabis sativa HOM05D006686 ORTHO05D008463 8.1e-189 664.1 468 69.9
TAR381G1724 Trochodendron aralioides HOM05D006686 ORTHO05D008463 1.1e-188 663.7 458 70.1
Gorai.011G003800 Gossypium raimondii HOM05D006686 ORTHO05D008463 5.2e-188 661.4 466 70.0
Gohir.D10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 2.0e-187 659.4 466 69.7
Nn5g27352 Nelumbo nucifera HOM05D006686 ORTHO05D008463 2.0e-187 659.4 456 70.4
Prupe.1G584700 Prunus persica HOM05D006686 ORTHO05D008463 2.6e-187 659.1 488 69.3
Duzib235G0699 Durio zibethinus HOM05D006686 ORTHO05D008463 5.8e-187 657.9 465 69.2
Gohir.A10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 1.3e-186 656.8 466 69.3
COL.COLO4_26876 Corchorus olitorius HOM05D006686 ORTHO05D008463 4.9e-186 654.8 464 69.8
HanXRQChr01g0013991 Helianthus annuus HOM05D006686 ORTHO05D008463 4.9e-186 654.8 466 69.3
FvH4_5g27990 Fragaria vesca HOM05D006686 ORTHO05D008463 1.9e-185 652.9 459 71.7
MD08G1247400 Malus domestica HOM05D006686 ORTHO05D008463 7.1e-185 651.0 460 70.0
MELO3C016473.2 Cucumis melo HOM05D006686 ORTHO05D008463 9.2e-185 650.6 466 69.5
Lsat_1_v5_gn_7_75180 Lactuca sativa HOM05D006686 ORTHO05D008463 1.2e-184 650.2 465 69.9
MBI03_g20875_MAGBIO Magnolia biondii HOM05D006686 ORTHO05D008463 1.2e-184 650.2 456 69.7
FAN04G2541 Fragaria x ananassa HOM05D006686 ORTHO05D008463 2.1e-184 649.4 455 70.5
CsaV3_3G006630 Cucumis sativus L. HOM05D006686 ORTHO05D008463 4.6e-184 648.3 466 69.1
ClCG10G007390 Citrullus lanatus HOM05D006686 ORTHO05D008463 7.8e-184 647.5 466 68.2
Ah.03g136810 Amaranthus hybridus HOM05D006686 ORTHO05D008463 1.3e-183 646.7 457 67.4
FAN18G1657 Fragaria x ananassa HOM05D006686 ORTHO05D008463 1.7e-183 646.4 464 70.9
PGR042G1861 Punica granatum HOM05D006686 ORTHO05D008463 5.2e-180 634.8 429 70.2
Eucgr.G00081 Eucalyptus grandis HOM05D006686 ORTHO05D008463 7.6e-179 630.9 430 70.2
ATR1089G117 Amborella trichopoda HOM05D006686 ORTHO05D008463 4.9e-178 628.2 427 69.6
Lj4g0021342 Lotus japonicus HOM05D006686 ORTHO05D008463 4.9e-178 628.2 385 77.1
unitig_22.g6102 Utricularia gibba HOM05D006686 ORTHO05D008463 6.4e-178 627.9 445 70.1
TWI59G1206 Tripterygium wilfordii HOM05D006686 ORTHO05D008463 1.1e-177 627.1 466 66.3
Glyma.07G273000 Glycine max HOM05D006686 ORTHO05D008463 1.9e-177 626.3 388 77.1
Aa31LG3G6890 Aethionema arabicum HOM05D006686 ORTHO05D008463 2.7e-176 622.5 429 69.5
CDE04G2622 Ceratophyllum demersum HOM05D006686 ORTHO05D008463 1.0e-175 620.5 461 65.1
Phvul.003G075600 Phaseolus vulgaris HOM05D006686 ORTHO05D008463 1.0e-175 620.5 430 70.2
VMungo1215G3175 Vigna mungo HOM05D006686 ORTHO05D008463 1.7e-175 619.8 388 75.3
PSO210G5299 Papaver somniferum HOM05D006686 ORTHO05D008463 5.6e-174 614.8 462 65.2
HPP92_005637 Vanilla planifolia HOM05D006686 ORTHO05D008463 9.6e-174 614.0 428 68.9
EL10Ac6g14006 Beta vulgaris HOM05D006686 ORTHO05D008463 4.8e-173 611.7 493 62.3
Lj9C281G9 Lonicera japonica HOM05D006686 ORTHO05D008463 6.2e-173 611.3 440 69.8
Ca_13532_v3 Cicer arietinum L. HOM05D006686 ORTHO05D008463 1.8e-172 609.8 451 66.7
arahy.Tifrunner.gnm1.ann1.A5H9W7 Arachis hypogaea HOM05D006686 ORTHO05D008463 2.4e-172 609.4 432 68.8
arahy.Tifrunner.gnm1.ann1.KKPS0T Arachis hypogaea HOM05D006686 ORTHO05D003399 5.3e-172 608.2 430 68.6
HPP92_005643 Vanilla planifolia HOM05D006686 ORTHO05D008463 2.0e-171 606.3 428 68.9
Lalb_Chr07g0176791 Lupinus albus HOM05D006686 ORTHO05D008463 3.4e-171 605.5 470 65.7
AL4G13300 Arabidopsis lyrata HOM05D006686 ORTHO05D008463 5.8e-171 604.7 428 68.5
C03p33220 Brassica napus HOM05D006686 ORTHO05D008463 1.3e-170 603.6 425 68.9
BcaC01g04848 Brassica carinata HOM05D006686 ORTHO05D008463 3.8e-170 602.1 425 68.7
BolC3t15644H Brassica oleracea HOM05D006686 ORTHO05D008463 3.8e-170 602.1 425 68.7
Sp6g11350 Schrenkiella parvula HOM05D006686 ORTHO05D008463 6.4e-170 601.3 425 68.2
Psat4g001080 Pisum sativum HOM05D006686 ORTHO05D008463 8.4e-170 600.9 392 70.9
BraA03t11965Z Brassica rapa HOM05D006686 ORTHO05D008463 1.9e-169 599.7 425 68.2
RcHm_v2.0_Chr7g0220181 Rosa chinensis HOM05D006686 ORTHO05D008463 1.9e-169 599.7 364 78.0
BcaB01g02944 Brassica carinata HOM05D006686 ORTHO05D008463 2.4e-169 599.4 444 66.2
Carub.0004s0259 Capsella rubella HOM05D006686 ORTHO05D008463 2.4e-169 599.4 429 67.8
Thhalv10013635m.g Eutrema salsugineum HOM05D006686 ORTHO05D008463 2.4e-169 599.4 422 68.2
Sp4g17050 Schrenkiella parvula HOM05D006686 ORTHO05D008463 7.1e-169 597.8 425 68.2
TPR.G5968 Trifolium pratense HOM05D006686 ORTHO05D008463 2.7e-168 595.9 383 73.9
THA.LOC104809035 Tarenaya hassleriana HOM05D006686 ORTHO05D008463 2.3e-167 592.8 469 63.8
AT2G23390 Arabidopsis thaliana HOM05D006686 ORTHO05D008463 2.1e-165 586.3 428 66.4
A03p27520 Brassica napus HOM05D006686 ORTHO05D008463 8.1e-165 584.3 456 63.6
Medtr4g134670 Medicago truncatula HOM05D006686 ORTHO05D008463 9.0e-164 580.9 388 71.9
Rhsim05G0116000 Rhododendron simsii HOM05D006686 ORTHO05D008463 1.5e-163 580.1 464 64.9
Zm00001eb423040 Zea mays HOM05D006686 ORTHO05D008463 9.9e-163 577.4 463 62.6
Os04g0442200 Oryza sativa ssp. japonica HOM05D006686 ORTHO05D008463 1.7e-162 576.6 453 62.7
Sed0016336 Sechium edule HOM05D006686 ORTHO05D008463 2.2e-162 576.2 365 74.2
SEGI_40259 Sequoiadendron giganteum HOM05D006686 ORTHO05D008463 3.2e-161 572.4 432 65.0
Cpa.g.sc113.25 Carica papaya HOM05D006686 ORTHO05D008463 3.9e-159 565.5 461 62.7
AagrBONN_evm.TU.Sc2ySwM_362.840 Anthoceros agrestis HOM05D006686 ORTHO05D008463 4.3e-158 562.0 437 62.9
Mapoly0007s0219 Marchantia polymorpha HOM05D006686 ORTHO05D008463 6.2e-157 558.1 437 61.3
Atru.chr6.339 Acer truncatum HOM05D006686 ORTHO05D008463 1.4e-153 547.0 382 69.6
Pp3c21_14930 Physcomitrium patens HOM05D006686 ORTHO05D008463 3.9e-151 538.9 449 59.7
CiPaw.06G176300 Carya illinoinensis HOM05D006686 ORTHO05D008463 2.9e-146 522.7 329 76.3
Aqoxy5G01865 Aquilegia oxysepala HOM05D006686 ORTHO05D008463 3.8e-146 522.3 432 59.7
Ciclev10001220m.g Citrus clementina HOM05D006686 ORTHO05D008463 1.4e-145 520.4 466 58.6
SMO364G0094 Selaginella moellendorffii HOM05D006686 ORTHO05D008463 1.9e-137 493.4 380 61.6
Sc03g0004960 Simmondsia chinensis HOM05D006686 ORTHO05D008463 1.7e-133 480.3 445 56.4
PSO447G0166 Papaver somniferum HOM05D006686 ORTHO05D008463 1.4e-124 450.7 462 52.2
Actinidia01629 Actinidia chinensis HOM05D006686 ORTHO05D008463 5.7e-110 402.1 307 66.1
Haze_09995 Corylus avellana HOM05D006686 ORTHO05D008463 3.7e-101 372.9 212 83.5
Cre09.g399626 Chlamydomonas reinhardtii HOM05D006686 ORTHO05D008463 1.6e-99 367.5 470 44.0
Glyma.17G001600 Glycine max HOM05D006686 ORTHO05D008463 6.1e-96 355.5 259 70.7
Haze_27211 Corylus avellana HOM05D006686 ORTHO05D008463 2.4e-92 343.6 384 45.3
PRCOL_00000210 Prasinoderma coloniale HOM05D006686 ORTHO05D008463 1.9e-89 334.0 456 42.3
RcHm_v2.0_Chr7g0220471 Rosa chinensis HOM05D006686 ORTHO05D008463 4.4e-86 322.8 221 72.4
FAN08G3117 Fragaria x ananassa HOM05D006686 ORTHO05D008463 2.1e-80 303.9 256 61.3
Oeu000154.1 Olea europaea HOM05D006686 ORTHO05D008463 3.6e-80 303.1 320 53.1
CARHR293020 Cardamine hirsuta HOM05D006686 ORTHO05D008463 1.1e-65 255.0 155 76.8
AUR62032459 Chenopodium quinoa HOM05D006686 ORTHO05D008463 3.1e-63 246.9 258 50.4
Eucgr.A00755 Eucalyptus grandis HOM05D006686 ORTHO05D008463 2.4e-60 237.3 147 76.2
Nitab4.5_0004668g0030 Nicotiana tabacum HOM05D006686 ORTHO05D008463 1.0e-58 231.9 233 55.4
Haze_09994 Corylus avellana HOM05D006686 ORTHO05D008463 9.0e-39 165.6 257 42.0
CBR_g48698 Chara braunii HOM05D006686 ORTHO05D008463 1.3e-29 135.2 131 52.7
MELO3C032221.2 Cucumis melo HOM05D006686 ORTHO05D008463 9.7e-25 119.0 88 69.3
Peaxi162Scf00011g01844 Petunia axillaris HOM05D006686 ORTHO05D008463 6.3e-24 116.3 135 53.3
Hund15396 Selenicereus undatus HOM05D006686 ORTHO05D008463 1.2e-22 112.1 73 69.9
Actinidia26190 Actinidia chinensis HOM05D006686 ORTHO05D008463 2.6e-22 110.9 68 73.5
Haze_05751 Corylus avellana HOM05D006686 ORTHO05D008463 2.2e-21 107.8 102 55.9
CiPaw.06G176500 Carya illinoinensis HOM05D006686 ORTHO05D008463 1.1e-20 105.5 130 45.4
CBR_g48699 Chara braunii HOM05D006686 ORTHO05D008463 1.2e-19 102.1 90 51.1
RcHm_v2.0_Chr7g0220191 Rosa chinensis HOM05D006686 ORTHO05D008463 2.3e-10 71.2 105 43.8
Sopen01g045520 Solanum pennellii HOM05D000904 ORTHO05D005281 2.4e-07 61.2 62 59.7
Solyc01g103100.3 Solanum lycopersicum HOM05D000904 ORTHO05D005281 2.6e-06 57.8 62 56.5


User provided reference genes

Program Settings