Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G853.45 Capsicum annuum HOM05D003900 ORTHO05D005009 1.1e-84 316.6 159 100.0
CAN.G78.130 Capsicum annuum HOM05D003900 ORTHO05D005009 3.6e-72 275.0 156 87.8
Solyc01g095110.4 Solanum lycopersicum HOM05D003900 ORTHO05D005009 6.3e-61 237.7 155 76.8
PGSC0003DMG400000195 Solanum tuberosum HOM05D003900 ORTHO05D005009 7.0e-60 234.2 155 76.1
Sopen01g038900 Solanum pennellii HOM05D003900 ORTHO05D005009 2.7e-59 232.3 155 76.1
Nitab4.5_0000915g0110 Nicotiana tabacum HOM05D003900 ORTHO05D005009 6.8e-55 217.6 150 72.7
Nitab4.5_0010695g0010 Nicotiana tabacum HOM05D003900 ORTHO05D005009 2.6e-54 215.7 150 72.0
CAN.G430.2 Capsicum annuum HOM05D003900 ORTHO05D005009 2.2e-53 212.6 126 86.5
CAN.G1005.1 Capsicum annuum HOM05D003900 ORTHO05D005009 5.4e-52 208.0 114 93.0
Peaxi162Scf00020g00155 Petunia axillaris HOM05D003900 ORTHO05D005009 2.0e-51 206.1 156 67.9
CAN.G874.71 Capsicum annuum HOM05D003900 ORTHO05D005009 9.5e-41 170.6 96 87.5
CAN.G460.4 Capsicum annuum HOM05D003900 ORTHO05D005009 2.0e-38 162.9 95 83.2
Cc02_g38560 Coffea canephora HOM05D003900 ORTHO05D005009 6.0e-35 151.4 151 53.6
CAN.G609.3 Capsicum annuum HOM05D003900 ORTHO05D005009 4.7e-32 141.7 145 57.9
Atru.chr5.563 Acer truncatum HOM05D003900 ORTHO05D005009 6.8e-31 137.9 153 49.7
CAN.G1417.4 Capsicum annuum HOM05D003900 ORTHO05D005009 8.9e-31 137.5 156 52.6
Dinv43863 Davidia involucrata HOM05D003900 ORTHO05D005009 2.6e-30 136.0 152 48.0
Atru.chr5.581 Acer truncatum HOM05D003900 ORTHO05D005009 5.8e-30 134.8 153 49.0
QL04p055515 Quercus lobata HOM05D003900 ORTHO05D005009 5.8e-30 134.8 150 48.0
Rhsim07G0010500 Rhododendron simsii HOM05D003900 ORTHO05D005009 1.3e-29 133.7 154 46.1
CSS0000093 Camellia sinensis var. sinensis HOM05D003900 ORTHO05D005009 3.2e-28 129.0 153 45.1
CSS0016355 Camellia sinensis var. sinensis HOM05D003900 ORTHO05D005009 3.2e-28 129.0 153 45.1
GSVIVG01026966001 Vitis vinifera HOM05D003900 ORTHO05D005009 9.2e-28 127.5 149 47.0
Ciclev10019067m.g Citrus clementina HOM05D003900 ORTHO05D005009 2.1e-27 126.3 154 46.1
CiPaw.01G066800 Carya illinoinensis HOM05D003900 ORTHO05D005009 1.0e-26 124.0 151 43.0
Haze_15564 Corylus avellana HOM05D003900 ORTHO05D005009 1.3e-26 123.6 150 45.3
THA.LOC104817316 Tarenaya hassleriana HOM05D003900 ORTHO05D005009 1.3e-26 123.6 150 45.3
CiPaw.01G067500 Carya illinoinensis HOM05D003900 ORTHO05D005009 5.1e-26 121.7 151 42.4
Thecc.01G352500 Theobroma cacao HOM05D003900 ORTHO05D005009 6.6e-26 121.3 155 43.9
vmacro13229 Vaccinium macrocarpon HOM05D003900 ORTHO05D005009 8.6e-26 120.9 153 45.1
CiPaw.01G067300 Carya illinoinensis HOM05D003900 ORTHO05D005009 1.5e-25 120.2 150 42.7
CiPaw.01G067200 Carya illinoinensis HOM05D003900 ORTHO05D005009 1.9e-25 119.8 150 42.7
CARHR171850 Cardamine hirsuta HOM05D003900 ORTHO05D005009 2.5e-25 119.4 149 43.6
CiPaw.01G066600 Carya illinoinensis HOM05D003900 ORTHO05D005009 2.5e-25 119.4 155 40.6
Gorai.008G119500 Gossypium raimondii HOM05D003900 ORTHO05D005009 3.3e-25 119.0 156 42.3
Duzib138G1643 Durio zibethinus HOM05D003900 ORTHO05D005009 4.3e-25 118.6 155 44.5
Lj7C507T1 Lonicera japonica HOM05D003900 ORTHO05D005009 4.3e-25 118.6 146 44.5
Gohir.D12G110200 Gossypium hirsutum HOM05D003900 ORTHO05D005009 7.3e-25 117.9 156 42.3
Manes.01G252300 Manihot esculenta HOM05D003900 ORTHO05D005009 7.3e-25 117.9 150 42.7
MD07G1131300 Malus domestica HOM05D003900 ORTHO05D005009 1.6e-24 116.7 155 41.3
CiPaw.01G067100 Carya illinoinensis HOM05D003900 ORTHO05D005009 2.8e-24 115.9 151 40.4
Migut.B01798 Erythranthe guttata HOM05D003900 ORTHO05D005009 2.8e-24 115.9 149 42.3
CANSAT56G3111 Cannabis sativa HOM05D003900 ORTHO05D005009 4.7e-24 115.2 149 43.6
Gohir.A12G106900 Gossypium hirsutum HOM05D003900 ORTHO05D005009 6.2e-24 114.8 155 41.9
SalBow3G3666 Salvia bowleyana HOM05D003900 ORTHO05D005009 1.8e-23 113.2 149 42.3
CiPaw.01G067400 Carya illinoinensis HOM05D003900 ORTHO05D005009 2.4e-23 112.8 150 42.0
AT5G28370 Arabidopsis thaliana HOM05D003900 ORTHO05D005009 3.1e-23 112.5 149 43.0
AT5G28460 Arabidopsis thaliana HOM05D003900 ORTHO05D005009 3.1e-23 112.5 149 43.0
AL5G43880 Arabidopsis lyrata HOM05D003900 ORTHO05D005009 6.8e-23 111.3 149 42.3
SGA_v2.0_scaffold4G02283 Striga asiatica HOM05D003900 ORTHO05D005009 8.9e-23 110.9 153 40.5
Prupe.2G177500 Prunus persica HOM05D003900 ORTHO05D005009 1.2e-22 110.5 150 42.0
Carub.0005s2821 Capsella rubella HOM05D003900 ORTHO05D005009 1.5e-22 110.2 149 41.6
COL.COLO4_12777 Corchorus olitorius HOM05D003900 ORTHO05D005009 1.5e-22 110.2 155 42.6
AT3G61520 Arabidopsis thaliana HOM05D003900 ORTHO05D005009 2.0e-22 109.8 149 41.6
Thhalv10001319m.g Eutrema salsugineum HOM05D003900 ORTHO05D005009 3.4e-22 109.0 118 49.2
Aa31LG10G15460 Aethionema arabicum HOM05D003900 ORTHO05D005009 5.8e-22 108.2 149 43.6
Oeu015216.1 Olea europaea HOM05D003900 ORTHO05D005009 9.9e-22 107.5 94 56.4
Duzib133G1046 Durio zibethinus HOM05D003900 ORTHO05D005009 3.8e-21 105.5 153 39.9
Sp4g28170 Schrenkiella parvula HOM05D003900 ORTHO05D005009 3.8e-21 105.5 150 40.7
Thhalv10022571m.g Eutrema salsugineum HOM05D003900 ORTHO05D005009 4.9e-21 105.1 149 39.6
TWI23G0979 Tripterygium wilfordii HOM05D003900 ORTHO05D005009 4.9e-21 105.1 154 42.2
Aa31LG1G27520 Aethionema arabicum HOM05D003900 ORTHO05D005009 1.1e-20 104.0 145 42.8
BcaC08g45129 Brassica carinata HOM05D003900 ORTHO05D005009 1.1e-20 104.0 155 39.4
TAR629G0263 Trochodendron aralioides HOM05D003900 ORTHO05D005009 2.4e-20 102.8 155 39.4
CARHR141390 Cardamine hirsuta HOM05D003900 ORTHO05D005009 4.2e-20 102.1 155 37.4
Lsat_1_v5_gn_7_2720 Lactuca sativa HOM05D003900 ORTHO05D005009 4.2e-20 102.1 145 40.7
A07p25540 Brassica napus HOM05D003900 ORTHO05D005009 5.4e-20 101.7 155 38.7
Potri.014G090400 Populus trichocarpa HOM05D003900 ORTHO05D005009 7.1e-20 101.3 152 38.8
Cfa003873 Carpinus fangiana HOM05D003900 ORTHO05D005009 9.3e-20 100.9 151 41.7
C06p27530 Brassica napus HOM05D003900 ORTHO05D005009 1.2e-19 100.5 155 38.7
BolC6t37920H Brassica oleracea HOM05D003900 ORTHO05D005009 1.6e-19 100.1 155 38.1
BraA07t30195Z Brassica rapa HOM05D003900 ORTHO05D005009 2.1e-19 99.8 148 39.9
Manes.05G029400 Manihot esculenta HOM05D003900 ORTHO05D005009 4.6e-19 98.6 149 39.6
Sc01g0003220 Simmondsia chinensis HOM05D003900 ORTHO05D005009 4.6e-19 98.6 150 37.3
RcHm_v2.0_Chr7g0228211 Rosa chinensis HOM05D003900 ORTHO05D005009 6.0e-19 98.2 149 38.3
RcHm_v2.0_Chr1g0357681 Rosa chinensis HOM05D003900 ORTHO05D005009 1.7e-18 96.7 149 38.3
BcaB02g07375 Brassica carinata HOM05D003900 ORTHO05D005009 2.3e-18 96.3 155 36.8
Sabra14G0065500 Salix brachista HOM05D003900 ORTHO05D005009 3.0e-18 95.9 150 37.3
Ah.15g096610 Amaranthus hybridus HOM05D003900 ORTHO05D005009 5.1e-18 95.1 159 38.4
AUR62004412 Chenopodium quinoa HOM05D003900 ORTHO05D005009 5.1e-18 95.1 149 36.2
RcHm_v2.0_Chr3g0468501 Rosa chinensis HOM05D003900 ORTHO05D005009 5.1e-18 95.1 143 37.8
FvH4_7g15360 Fragaria vesca HOM05D003900 ORTHO05D005009 6.6e-18 94.7 155 37.4
FAN06G2614 Fragaria x ananassa HOM05D003900 ORTHO05D005009 6.6e-18 94.7 155 37.4
FAN06G4981 Fragaria x ananassa HOM05D003900 ORTHO05D005009 6.6e-18 94.7 155 37.4
EL10Ac1g00355 Beta vulgaris HOM05D003900 ORTHO05D005009 8.7e-18 94.4 151 39.1
FAN03G2211 Fragaria x ananassa HOM05D003900 ORTHO05D005009 8.7e-18 94.4 155 37.4
MD01G1071400 Malus domestica HOM05D003900 ORTHO05D005009 8.7e-18 94.4 118 42.4
FAN10G3614 Fragaria x ananassa HOM05D003900 ORTHO05D005009 3.3e-17 92.4 155 37.4
HanXRQChr04g0120801 Helianthus annuus HOM05D003900 ORTHO05D005009 7.3e-17 91.3 156 34.0
Phvul.002G326200 Phaseolus vulgaris HOM05D003900 ORTHO05D005009 3.6e-16 89.0 152 34.9
Aqoxy7G01955 Aquilegia oxysepala HOM05D003900 ORTHO05D005009 6.2e-16 88.2 156 36.5
Lj4g0005982 Lotus japonicus HOM05D003900 ORTHO05D005009 8.1e-16 87.8 155 36.1
PGR142G0969 Punica granatum HOM05D003900 ORTHO05D005009 4.0e-15 85.5 126 38.9
Actinidia20162 Actinidia chinensis HOM05D003900 ORTHO05D005009 6.9e-15 84.7 94 47.9
Nn1g01685 Nelumbo nucifera HOM05D003900 ORTHO05D005009 9.0e-15 84.3 150 30.7
AUR62022618 Chenopodium quinoa HOM05D003900 ORTHO05D005009 1.5e-14 83.6 149 35.6
FAN04G0755 Fragaria x ananassa HOM05D003900 ORTHO05D005009 3.4e-14 82.4 149 33.6
MBI11_g19575_MAGBIO Magnolia biondii HOM05D003900 ORTHO05D005009 4.4e-14 82.0 145 32.4
arahy.Tifrunner.gnm1.ann1.U9H0N8 Arachis hypogaea HOM05D003900 ORTHO05D005009 5.8e-14 81.6 152 35.5
Eucgr.E00097 Eucalyptus grandis HOM05D003900 ORTHO05D005009 9.9e-14 80.9 152 32.2
MBI11_g19576_MAGBIO Magnolia biondii HOM05D003900 ORTHO05D005009 9.9e-14 80.9 145 31.0
CAN.G1129.41 Capsicum annuum HOM05D003900 ORTHO05D005009 1.3e-13 80.5 80 56.2
FvH4_5g32150 Fragaria vesca HOM05D003900 ORTHO05D005009 2.2e-13 79.7 149 32.9
arahy.Tifrunner.gnm1.ann1.K45FBX Arachis hypogaea HOM05D003900 ORTHO05D005009 8.4e-13 77.8 152 34.2
DCAR_025213 Daucus carota HOM05D003900 ORTHO05D005009 1.4e-12 77.0 159 30.8
VMungo0251G1173 Vigna mungo HOM05D003900 ORTHO05D005009 1.9e-12 76.6 152 30.9
Dinv32521 Davidia involucrata HOM05D003900 ORTHO05D005009 5.4e-12 75.1 94 40.4
FvH4_5g03011 Fragaria vesca HOM05D003900 ORTHO05D005009 4.6e-11 72.0 149 32.2
FAN01G0431 Fragaria x ananassa HOM05D003900 ORTHO05D005009 4.6e-11 72.0 118 34.7
ClCG09G009150 Citrullus lanatus HOM05D003900 ORTHO05D005009 6.0e-11 71.6 105 36.2
Sed0017189 Sechium edule HOM05D003900 ORTHO05D005009 7.9e-11 71.2 102 36.3
CsaV3_7G025780 Cucumis sativus L. HOM05D003900 ORTHO05D005009 6.6e-10 68.2 103 35.9
VMungo0251G0997 Vigna mungo HOM05D003900 ORTHO05D005009 2.5e-09 66.2 107 31.8
FAN06G0440 Fragaria x ananassa HOM05D003900 ORTHO05D005009 8.1e-08 61.2 104 33.7
Ca_17228_v3 Cicer arietinum L. HOM05D000113 ORTHO05D005009 1.4e-07 60.5 94 36.2
Medtr8g098755 Medicago truncatula HOM05D003900 ORTHO05D005009 1.8e-07 60.1 96 34.4
TPR.G2949 Trifolium pratense HOM05D003900 ORTHO05D005009 2.4e-07 59.7 101 33.7
Glyma.16G031800 Glycine max HOM05D003900 ORTHO05D005009 2.0e-06 56.6 155 28.4
Lalb_Chr04g0259301 Lupinus albus HOM05D003900 ORTHO05D005009 3.4e-06 55.8 130 30.8


User provided reference genes

Program Settings