Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G853.22 Capsicum annuum HOM05D008050 ORTHO05D003796 2.6e-166 588.6 285 100.0
CAN.G853.5 Capsicum annuum HOM05D008050 ORTHO05D003796 3.6e-123 445.3 215 99.1
CAN.G781.37 Capsicum annuum HOM05D008050 ORTHO05D003796 1.5e-116 423.3 235 88.5
Nitab4.5_0001366g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 1.2e-49 201.1 268 43.7
Nitab4.5_0013311g0020 Nicotiana tabacum HOM05D008050 ORTHO05D003796 5.8e-49 198.7 218 45.9
Nitab4.5_0003386g0050 Nicotiana tabacum HOM05D008050 ORTHO05D003796 1.5e-44 184.1 207 48.3
Nitab4.5_0001745g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 7.4e-44 181.8 224 45.1
Nitab4.5_0023007g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 7.4e-44 181.8 311 39.2
Nitab4.5_0001670g0030 Nicotiana tabacum HOM05D008050 ORTHO05D003796 9.7e-44 181.4 249 43.4
Nitab4.5_0007586g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 9.7e-44 181.4 228 45.6
Nitab4.5_0015616g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 9.7e-44 181.4 228 45.6
Nitab4.5_0000499g0070 Nicotiana tabacum HOM05D008050 ORTHO05D003796 6.3e-43 178.7 192 50.5
PGSC0003DMG400045663 Solanum tuberosum HOM05D008050 ORTHO05D003796 9.0e-42 174.9 279 40.9
Solyc03g114260.1 Solanum lycopersicum HOM05D008050 ORTHO05D003796 4.5e-41 172.6 284 41.5
Nitab4.5_0008183g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 1.7e-40 170.6 228 44.7
Nitab4.5_0001745g0030 Nicotiana tabacum HOM05D008050 ORTHO05D003796 6.5e-40 168.7 181 50.3
PGSC0003DMG400047167 Solanum tuberosum HOM05D008050 ORTHO05D003796 2.5e-39 166.8 285 40.7
PGSC0003DMG400040550 Solanum tuberosum HOM05D008050 ORTHO05D003796 3.2e-39 166.4 287 40.1
PGSC0003DMG400039478 Solanum tuberosum HOM05D008050 ORTHO05D003796 4.2e-39 166.0 283 39.9
Nitab4.5_0010159g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 7.2e-39 165.2 193 48.2
Peaxi162Scf00017g00243 Petunia axillaris HOM05D008050 ORTHO05D003796 7.2e-39 165.2 211 46.9
PGSC0003DMG400046943 Solanum tuberosum HOM05D008050 ORTHO05D003796 2.1e-38 163.7 283 39.6
Solyc03g062670.1 Solanum lycopersicum HOM05D008050 ORTHO05D003796 6.7e-37 158.7 188 47.3
Sopen03g033360 Solanum pennellii HOM05D003268 ORTHO05D003796 8.8e-37 158.3 272 39.7
Sopen03g014990 Solanum pennellii HOM05D008050 ORTHO05D003796 2.0e-36 157.1 188 47.3
Nitab4.5_0001286g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 2.5e-36 156.8 201 42.8
Sopen03g015050 Solanum pennellii HOM05D008050 ORTHO05D003796 5.9e-33 145.6 246 37.8
Solyc03g059300.1 Solanum lycopersicum HOM05D008050 ORTHO05D003796 7.7e-33 145.2 230 38.3
Nitab4.5_0002471g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 5.0e-32 142.5 224 38.4
PGSC0003DMG400045571 Solanum tuberosum HOM05D008050 ORTHO05D003796 1.1e-31 141.4 204 41.7
Nitab4.5_0001745g0020 Nicotiana tabacum HOM05D008050 ORTHO05D003796 1.2e-30 137.9 222 37.4
Sopen03g033310 Solanum pennellii HOM05D008050 ORTHO05D003796 1.4e-29 134.4 290 32.4
Sopen03g033300 Solanum pennellii HOM05D008050 ORTHO05D003796 2.3e-29 133.7 287 33.1
Nitab4.5_0011392g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 1.5e-28 131.0 192 41.1
PGSC0003DMG400037921 Solanum tuberosum HOM05D008050 ORTHO05D003796 1.7e-27 127.5 185 39.5
Nitab4.5_0001670g0020 Nicotiana tabacum HOM05D008050 ORTHO05D003796 2.6e-25 120.2 191 38.7
Nitab4.5_0002471g0020 Nicotiana tabacum HOM05D008050 ORTHO05D003796 2.6e-25 120.2 194 40.2
Nitab4.5_0014453g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 3.2e-23 113.2 181 39.2
Solyc03g062750.1 Solanum lycopersicum HOM05D008050 ORTHO05D003796 3.2e-23 113.2 110 49.1
CAN.G853.19 Capsicum annuum HOM05D008050 ORTHO05D003796 4.2e-23 112.8 66 80.3
Solyc03g114220.1 Solanum lycopersicum HOM05D008050 ORTHO05D003796 1.2e-22 111.3 245 34.3
CAN.G135.83 Capsicum annuum HOM05D008050 ORTHO05D003796 3.6e-22 109.8 278 29.9
Nitab4.5_0002878g0020 Nicotiana tabacum HOM05D008050 ORTHO05D003796 5.2e-21 105.9 174 35.1
Nitab4.5_0006831g0040 Nicotiana tabacum HOM05D008050 ORTHO05D003796 1.3e-19 101.3 298 29.2
Peaxi162Scf00258g00008 Petunia axillaris HOM05D008050 ORTHO05D003796 1.7e-19 100.9 157 36.9
Nitab4.5_0008515g0010 Nicotiana tabacum HOM05D010426 ORTHO05D003796 3.1e-18 96.7 170 32.9
Peaxi162Scf00692g00052 Petunia axillaris HOM05D010426 ORTHO05D003796 3.1e-18 96.7 154 36.4
Actinidia18619 Actinidia chinensis HOM05D002630 ORTHO05D000952 4.1e-18 96.3 150 37.3
Actinidia18621 Actinidia chinensis HOM05D007636 ORTHO05D000952 4.1e-18 96.3 150 37.3
CAN.G894.4 Capsicum annuum HOM05D008050 ORTHO05D003796 5.3e-18 95.9 214 32.7
Peaxi162Scf00244g00076 Petunia axillaris HOM05D008050 ORTHO05D003796 7.0e-18 95.5 179 34.1
Peaxi162Scf00027g00162 Petunia axillaris HOM05D010426 ORTHO05D003796 9.1e-18 95.1 147 36.1
Peaxi162Scf01327g00121 Petunia axillaris HOM05D003646 ORTHO05D004503 2.0e-17 94.0 154 35.1
PGSC0003DMG400007065 Solanum tuberosum HOM05D008050 ORTHO05D003796 2.6e-17 93.6 174 32.2
Nitab4.5_0009210g0020 Nicotiana tabacum HOM05D009491 ORTHO05D003796 3.5e-17 93.2 280 26.1
Nitab4.5_0010629g0010 Nicotiana tabacum HOM05D010426 ORTHO05D003796 3.5e-17 93.2 174 32.2
Nitab4.5_0009087g0010 Nicotiana tabacum HOM05D009491 ORTHO05D003796 4.5e-17 92.8 280 26.1
Nitab4.5_0000016g0610 Nicotiana tabacum HOM05D010426 ORTHO05D003796 5.9e-17 92.4 180 31.1
Nitab4.5_0000016g0580 Nicotiana tabacum HOM05D010426 ORTHO05D003796 7.7e-17 92.0 177 32.8
Nitab4.5_0007033g0010 Nicotiana tabacum HOM05D010426 ORTHO05D003796 1.3e-16 91.3 237 28.7
Nitab4.5_0022592g0010 Nicotiana tabacum HOM05D009491 ORTHO05D003796 1.7e-16 90.9 253 26.5
Nitab4.5_0000016g0550 Nicotiana tabacum HOM05D010426 ORTHO05D003796 2.2e-16 90.5 237 28.7
Nitab4.5_0002160g0040 Nicotiana tabacum HOM05D009491 ORTHO05D003796 2.2e-16 90.5 309 27.2
Nitab4.5_0000016g0630 Nicotiana tabacum HOM05D010426 ORTHO05D003796 2.9e-16 90.1 185 31.4
Nitab4.5_0003111g0070 Nicotiana tabacum HOM05D009491 ORTHO05D003796 2.9e-16 90.1 280 26.1
Nitab4.5_0007033g0050 Nicotiana tabacum HOM05D010426 ORTHO05D003796 3.8e-16 89.7 183 31.1
Lj5P158T23 Lonicera japonica HOM05D014435 ORTHO05D000952 1.1e-15 88.2 179 33.0
Nitab4.5_0000016g0530 Nicotiana tabacum HOM05D010426 ORTHO05D003796 2.5e-15 87.0 151 34.4
Nitab4.5_0002608g0030 Nicotiana tabacum HOM05D009491 ORTHO05D003796 2.5e-15 87.0 217 28.6
CAN.G641.1 Capsicum annuum HOM05D008149 ORTHO05D010130 5.5e-15 85.9 204 29.9
Peaxi162Scf01007g00022 Petunia axillaris HOM05D009491 ORTHO05D003796 5.5e-15 85.9 234 26.5
Peaxi162Scf01007g00024 Petunia axillaris HOM05D009491 ORTHO05D003796 5.5e-15 85.9 234 26.5
Peaxi162Scf01007g00210 Petunia axillaris HOM05D009491 ORTHO05D003796 5.5e-15 85.9 234 26.5
Peaxi162Scf00009g00021 Petunia axillaris HOM05D009491 ORTHO05D003796 7.2e-15 85.5 174 29.3
Nitab4.5_0001874g0070 Nicotiana tabacum HOM05D008149 ORTHO05D010130 1.2e-14 84.7 162 31.5
Nitab4.5_0010957g0020 Nicotiana tabacum HOM05D008149 ORTHO05D010130 1.2e-14 84.7 178 30.9
CAN.G641.16 Capsicum annuum HOM05D008149 ORTHO05D010130 1.6e-14 84.3 203 29.6
PGSC0003DMG400046261 Solanum tuberosum HOM05D009491 ORTHO05D003796 2.7e-14 83.6 184 28.8
PGSC0003DMG400009377 Solanum tuberosum HOM05D009491 ORTHO05D003796 3.6e-14 83.2 190 30.0
CAN.G1046.10 Capsicum annuum HOM05D008050 ORTHO05D003796 4.7e-14 82.8 45 84.4
CAN.G2048.1 Capsicum annuum HOM05D008050 ORTHO05D003796 6.1e-14 82.4 280 25.7
Nitab4.5_0000082g0040 Nicotiana tabacum HOM05D008149 ORTHO05D010130 8.0e-14 82.0 163 30.7
Solyc07g053680.2 Solanum lycopersicum HOM05D009491 ORTHO05D003796 8.0e-14 82.0 183 29.0
PGSC0003DMG400038867 Solanum tuberosum HOM05D009491 ORTHO05D003796 8.0e-14 82.0 184 29.3
CAN.G308.65 Capsicum annuum HOM05D008149 ORTHO05D010130 1.0e-13 81.6 179 27.9
Nitab4.5_0003562g0020 Nicotiana tabacum HOM05D008149 ORTHO05D010130 1.4e-13 81.3 221 27.6
Nitab4.5_0025925g0010 Nicotiana tabacum HOM05D010426 ORTHO05D003796 1.4e-13 81.3 183 30.6
CAN.G616.30 Capsicum annuum HOM05D009491 ORTHO05D003796 1.8e-13 80.9 178 32.6
FvH4_6g39190 Fragaria vesca HOM05D002630 ORTHO05D000952 1.8e-13 80.9 180 29.4
Peaxi162Scf00397g00002 Petunia axillaris HOM05D009491 ORTHO05D003796 1.8e-13 80.9 224 28.1
CAN.G78.33 Capsicum annuum HOM05D008050 ORTHO05D003796 2.3e-13 80.5 188 30.9
Peaxi162Scf00397g00112 Petunia axillaris HOM05D009491 ORTHO05D003796 2.3e-13 80.5 244 27.0
RcHm_v2.0_Chr7g0231191 Rosa chinensis HOM05D002630 ORTHO05D000952 3.0e-13 80.1 179 30.2
Nitab4.5_0010542g0030 Nicotiana tabacum HOM05D008050 ORTHO05D003796 4.0e-13 79.7 123 39.8
FvH4_6g39200 Fragaria vesca HOM05D002630 ORTHO05D000952 5.2e-13 79.3 256 26.6
RcHm_v2.0_Chr6g0271921 Rosa chinensis HOM05D002630 ORTHO05D000952 5.2e-13 79.3 179 27.9
PGSC0003DMG400000154 Solanum tuberosum HOM05D009491 ORTHO05D003796 5.2e-13 79.3 220 30.0
FvH4_6g39600 Fragaria vesca HOM05D002630 ORTHO05D000952 6.8e-13 79.0 180 28.9
FAN05G0057 Fragaria x ananassa HOM05D002630 ORTHO05D000952 6.8e-13 79.0 256 26.6
Peaxi162Scf00397g00022 Petunia axillaris HOM05D008050 ORTHO05D003796 6.8e-13 79.0 184 27.7
Peaxi162Scf37870g00003 Petunia axillaris HOM05D009491 ORTHO05D003796 6.8e-13 79.0 247 26.7
FAN05G2844 Fragaria x ananassa HOM05D002630 ORTHO05D000952 8.8e-13 78.6 256 26.6
FAN14G2281 Fragaria x ananassa HOM05D002630 ORTHO05D000952 8.8e-13 78.6 256 26.6
FAN14G5590 Fragaria x ananassa HOM05D002630 ORTHO05D000952 2.0e-12 77.4 256 26.2
Nitab4.5_0024412g0010 Nicotiana tabacum HOM05D009491 ORTHO05D003796 2.0e-12 77.4 294 24.8
FAN02G4413 Fragaria x ananassa HOM05D002630 ORTHO05D000952 3.4e-12 76.6 233 26.6
FAN09G4772 Fragaria x ananassa HOM05D002630 ORTHO05D000952 4.4e-12 76.3 256 26.6
Nitab4.5_0007586g0040 Nicotiana tabacum HOM05D008050 ORTHO05D003796 4.4e-12 76.3 178 35.4
Rhsim11G0115900 Rhododendron simsii HOM05D008858 ORTHO05D000952 4.4e-12 76.3 166 37.3
Peaxi162Scf00650g00014 Petunia axillaris HOM05D008149 ORTHO05D010130 5.7e-12 75.9 156 30.8
FAN02G1492 Fragaria x ananassa HOM05D002630 ORTHO05D000952 9.7e-12 75.1 180 28.3
Nitab4.5_0000008g0630 Nicotiana tabacum HOM05D010426 ORTHO05D003796 9.7e-12 75.1 174 28.7
CAN.G1095.3 Capsicum annuum HOM05D000069 ORTHO05D010130 1.7e-11 74.3 169 29.6
Peaxi162Scf01324g00211 Petunia axillaris HOM05D017006 ORTHO05D010130 1.7e-11 74.3 168 32.1
Peaxi162Scf01324g00212 Petunia axillaris HOM05D017006 ORTHO05D010130 1.7e-11 74.3 168 32.1
Peaxi162Scf01780g00003 Petunia axillaris HOM05D017006 ORTHO05D010130 1.7e-11 74.3 168 32.1
CsaV3_4G025380 Cucumis sativus L. HOM05D002630 ORTHO05D000952 2.2e-11 73.9 163 29.4
Nitab4.5_0000608g0100 Nicotiana tabacum HOM05D008149 ORTHO05D010130 2.2e-11 73.9 202 28.2
Peaxi162Scf00493g00439 Petunia axillaris HOM05D008149 ORTHO05D010130 3.7e-11 73.2 147 30.6
RcHm_v2.0_Chr7g0211251 Rosa chinensis HOM05D002630 ORTHO05D000952 3.7e-11 73.2 179 27.4
FAN09G2675 Fragaria x ananassa HOM05D002630 ORTHO05D000952 4.8e-11 72.8 204 27.9
PSO170G0081 Papaver somniferum HOM05D031459 ORTHO05D012496 6.3e-11 72.4 135 36.3
CAN.G1612.2 Capsicum annuum HOM05D008149 ORTHO05D010130 8.3e-11 72.0 140 33.6
Duzib212G0444 Durio zibethinus HOM05D010810 ORTHO05D000952 1.1e-10 71.6 172 32.6
FvH4_6g39580 Fragaria vesca HOM05D002630 ORTHO05D000952 1.8e-10 70.9 158 29.1
FAN14G3453 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.8e-10 70.9 158 29.1
FAN14G5613 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.8e-10 70.9 158 29.1
Prupe.2G202900 Prunus persica HOM05D000010 ORTHO05D015705 2.4e-10 70.5 177 31.1
Peaxi162Scf00016g00168 Petunia axillaris HOM05D008149 ORTHO05D010130 3.1e-10 70.1 155 29.0
Sopen01g038300 Solanum pennellii HOM05D009491 ORTHO05D003796 3.1e-10 70.1 183 31.1
Gohir.A13G064566 Gossypium hirsutum HOM05D009365 ORTHO05D000952 5.3e-10 69.3 150 32.7
Nitab4.5_0001286g0110 Nicotiana tabacum HOM05D008050 ORTHO05D003796 5.3e-10 69.3 206 29.1
CsaV3_1G044320 Cucumis sativus L. HOM05D002630 ORTHO05D000952 7.0e-10 68.9 214 25.7
PGSC0003DMG400036166 Solanum tuberosum HOM05D009491 ORTHO05D003796 7.0e-10 68.9 124 35.5
RcHm_v2.0_Chr3g0452871 Rosa chinensis HOM05D028547 ORTHO05D000952 9.1e-10 68.6 160 33.8
Peaxi162Scf00066g00145 Petunia axillaris HOM05D008149 ORTHO05D010130 1.6e-09 67.8 169 24.9
Nitab4.5_0007586g0070 Nicotiana tabacum HOM05D008050 ORTHO05D003796 2.7e-09 67.0 81 42.0
CAN.G1424.7 Capsicum annuum HOM05D008050 ORTHO05D003796 3.5e-09 66.6 85 40.0
Nitab4.5_0001670g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 3.5e-09 66.6 99 37.4
Sed0001946 Sechium edule HOM05D002630 ORTHO05D000952 7.7e-09 65.5 168 28.6
Hma1.2p1_0726F.1_g209020 Hydrangea macrophylla HOM05D000010 ORTHO05D000952 1.0e-08 65.1 179 28.5
Hma1.2p1_0726F.1_g209030 Hydrangea macrophylla HOM05D000010 ORTHO05D000952 1.0e-08 65.1 179 28.5
Actinidia11062 Actinidia chinensis HOM05D013685 ORTHO05D000952 1.7e-08 64.3 246 24.0
Gohir.A01G018850 Gossypium hirsutum HOM05D009365 ORTHO05D000952 2.2e-08 63.9 204 26.5
Solyc02g061900.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 2.9e-08 63.5 164 25.6
Sopen07g027650 Solanum pennellii HOM05D009491 ORTHO05D003796 3.8e-08 63.2 215 24.7
Nitab4.5_0005444g0040 Nicotiana tabacum HOM05D008050 ORTHO05D003796 5.0e-08 62.8 49 57.1
Sed0024693 Sechium edule HOM05D002630 ORTHO05D000952 5.0e-08 62.8 181 24.9
MD11G1219300 Malus domestica HOM05D002630 ORTHO05D000952 6.5e-08 62.4 187 26.7
Duzib212G0912 Durio zibethinus HOM05D010810 ORTHO05D000952 8.5e-08 62.0 175 29.1
Sopen02g013040 Solanum pennellii HOM05D008149 ORTHO05D010130 8.5e-08 62.0 164 25.0
BcaC06g32150 Brassica carinata HOM05D000010 ORTHO05D000063 1.1e-07 61.6 157 28.0
BraA02t04811Z Brassica rapa HOM05D000010 ORTHO05D000063 1.1e-07 61.6 157 28.0
BcaB05g21764 Brassica carinata HOM05D000010 ORTHO05D000063 1.9e-07 60.8 157 27.4
CAN.G308.28 Capsicum annuum HOM05D007636 ORTHO05D017739 1.9e-07 60.8 251 26.7
Prupe.4G230900 Prunus persica HOM05D002630 ORTHO05D000952 1.9e-07 60.8 128 28.9
Prupe.4G231000 Prunus persica HOM05D002630 ORTHO05D000952 1.9e-07 60.8 128 28.9
Prupe.2G202800 Prunus persica HOM05D000010 ORTHO05D015705 2.5e-07 60.5 171 29.2
C02p01920 Brassica napus HOM05D000010 ORTHO05D000063 3.2e-07 60.1 157 27.4
BolC2t06149H Brassica oleracea HOM05D000010 ORTHO05D000063 3.2e-07 60.1 157 27.4
Peaxi162Scf00108g00028 Petunia axillaris HOM05D008149 ORTHO05D010130 4.2e-07 59.7 158 26.6
Actinidia34725 Actinidia chinensis HOM05D040213 ORTHO05D000952 1.2e-06 58.2 152 28.3
Oeu006191.1 Olea europaea HOM05D013612 ORTHO05D000952 1.2e-06 58.2 167 28.1
Oeu006192.1 Olea europaea HOM05D013612 ORTHO05D000952 1.2e-06 58.2 167 28.1
Nitab4.5_0027357g0010 Nicotiana tabacum HOM05D010426 ORTHO05D003796 1.6e-06 57.8 85 40.0
Oeu003424.1 Olea europaea HOM05D013612 ORTHO05D000952 1.6e-06 57.8 167 30.5
QL06p028772 Quercus lobata HOM05D000010 ORTHO05D000063 1.6e-06 57.8 149 26.2
Actinidia11057 Actinidia chinensis HOM05D013685 ORTHO05D000952 2.1e-06 57.4 222 23.9
Nitab4.5_0008734g0030 Nicotiana tabacum HOM05D010426 ORTHO05D003796 2.1e-06 57.4 86 39.5
Prupe.I005300 Prunus persica HOM05D002630 ORTHO05D000952 2.1e-06 57.4 128 28.1
MD01G1094000 Malus domestica HOM05D000010 ORTHO05D011899 2.7e-06 57.0 202 23.3
Prupe.4G246100 Prunus persica HOM05D002630 ORTHO05D000952 2.7e-06 57.0 128 28.1
Peaxi162Scf00017g02638 Petunia axillaris HOM05D008050 ORTHO05D003796 3.6e-06 56.6 77 42.9
PGSC0003DMG400005532 Solanum tuberosum HOM05D000021 ORTHO05D007163 3.6e-06 56.6 93 38.7
FAN27G0121 Fragaria x ananassa HOM05D002630 ORTHO05D000952 4.7e-06 56.2 169 26.6
Cpa.g.sc80.14 Carica papaya HOM05D001613 ORTHO05D001556 8.0e-06 55.5 146 26.0
FAN15G3021 Fragaria x ananassa HOM05D002630 ORTHO05D000952 8.0e-06 55.5 167 26.9
Peaxi162Scf00304g01110 Petunia axillaris HOM05D051476 ORTHO05D003796 8.0e-06 55.5 88 42.0


User provided reference genes

Program Settings