Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G853.15 Capsicum annuum HOM05D003119 ORTHO05D003559 1.7e-246 855.5 411 100.0
Solyc03g113820.3 Solanum lycopersicum HOM05D003119 ORTHO05D003559 1.2e-196 689.9 406 82.5
Nitab4.5_0003386g0030 Nicotiana tabacum HOM05D003119 ORTHO05D003559 1.1e-184 650.2 388 82.2
Peaxi162Scf00017g02524 Petunia axillaris HOM05D003119 ORTHO05D003559 4.2e-181 638.3 406 77.1
PGSC0003DMG400024584 Solanum tuberosum HOM05D003119 ORTHO05D003559 3.5e-180 635.2 351 86.6
Nitab4.5_0008927g0020 Nicotiana tabacum HOM05D003119 ORTHO05D003559 1.5e-170 603.2 417 73.4
Dinv20699 Davidia involucrata HOM05D003119 ORTHO05D003559 7.4e-170 600.9 406 71.7
vmacro19356 Vaccinium macrocarpon HOM05D003119 ORTHO05D003559 3.9e-163 578.6 406 69.7
Cc04_g12970 Coffea canephora HOM05D003119 ORTHO05D003559 1.5e-162 576.6 406 69.2
CSS0022012 Camellia sinensis var. sinensis HOM05D003119 ORTHO05D003559 1.1e-160 570.5 407 66.8
QL10p012342 Quercus lobata HOM05D003119 ORTHO05D003559 9.0e-160 567.4 400 68.8
Atru.chr9.2402 Acer truncatum HOM05D003119 ORTHO05D003559 2.6e-159 565.8 406 68.2
Ca_16209_v3 Cicer arietinum L. HOM05D003119 ORTHO05D003559 3.8e-158 562.0 400 68.8
Hma1.2p1_0002F.1_g002830 Hydrangea macrophylla HOM05D003119 ORTHO05D003559 6.5e-158 561.2 401 67.8
MD14G1187100 Malus domestica HOM05D003119 ORTHO05D003559 6.5e-158 561.2 404 69.1
Ciclev10018883m.g Citrus clementina HOM05D003119 ORTHO05D003559 1.9e-157 559.7 406 67.7
Manes.14G070200 Manihot esculenta HOM05D003119 ORTHO05D003559 1.3e-155 553.5 407 66.8
Oeu018528.1 Olea europaea HOM05D003119 ORTHO05D003559 1.8e-155 553.1 402 68.4
Lj1g0014859 Lotus japonicus HOM05D003119 ORTHO05D003559 4.3e-154 548.5 399 67.7
Potri.012G075932 Populus trichocarpa HOM05D003119 ORTHO05D003559 5.7e-154 548.1 406 65.8
TAR629G2536 Trochodendron aralioides HOM05D003119 ORTHO05D003559 2.2e-153 546.2 406 64.8
Eucgr.B00338 Eucalyptus grandis HOM05D003119 ORTHO05D003559 1.1e-152 543.9 407 65.1
Lj9C454T4 Lonicera japonica HOM05D003119 ORTHO05D003559 2.4e-152 542.7 408 65.4
Duzib205G0437 Durio zibethinus HOM05D003119 ORTHO05D003559 4.1e-152 542.0 398 66.8
Glyma.06G186000 Glycine max HOM05D003119 ORTHO05D003559 4.1e-152 542.0 399 64.7
FvH4_5g16380 Fragaria vesca HOM05D003119 ORTHO05D003559 1.5e-151 540.0 411 65.9
FAN18G1370 Fragaria x ananassa HOM05D003119 ORTHO05D003559 1.5e-151 540.0 411 65.9
Lsat_1_v5_gn_4_73520 Lactuca sativa HOM05D003119 ORTHO05D003559 2.6e-151 539.3 401 63.6
Aqoxy3G03116 Aquilegia oxysepala HOM05D003119 ORTHO05D003559 5.9e-151 538.1 407 64.1
HanXRQChr09g0271881 Helianthus annuus HOM05D003119 ORTHO05D003559 5.9e-151 538.1 406 64.3
TWI15G0194 Tripterygium wilfordii HOM05D003119 ORTHO05D003559 1.3e-150 537.0 399 66.9
Gorai.001G078400 Gossypium raimondii HOM05D003119 ORTHO05D003559 1.7e-150 536.6 400 65.8
FAN08G2581 Fragaria x ananassa HOM05D003119 ORTHO05D003559 2.2e-150 536.2 431 63.8
Thecc.03G004100 Theobroma cacao HOM05D003119 ORTHO05D003559 2.9e-150 535.8 404 64.6
Gohir.D07G074200 Gossypium hirsutum HOM05D003119 ORTHO05D003559 1.1e-149 533.9 400 65.5
GSVIVG01007826001 Vitis vinifera HOM05D003119 ORTHO05D003559 3.2e-149 532.3 406 64.3
PSO832G2904 Papaver somniferum HOM05D003119 ORTHO05D003559 4.6e-148 528.5 410 62.4
SalBow3G3123 Salvia bowleyana HOM05D003119 ORTHO05D003559 7.9e-148 527.7 406 63.1
Gohir.A07G069566 Gossypium hirsutum HOM05D003119 ORTHO05D003559 5.1e-147 525.0 396 65.9
ECA232G0870 Erigeron canadensis HOM05D003119 ORTHO05D003559 1.1e-146 523.9 403 63.0
PGR083G0248 Punica granatum HOM05D003119 ORTHO05D003559 3.3e-146 522.3 409 63.6
Sed0021395 Sechium edule HOM05D003119 ORTHO05D003559 4.8e-145 518.5 407 63.9
ATR0712G088 Amborella trichopoda HOM05D003119 ORTHO05D003559 2.0e-143 513.1 401 62.3
MELO3C017123.2 Cucumis melo HOM05D003119 ORTHO05D003559 4.5e-143 511.9 407 62.9
Prupe.5G179300 Prunus persica HOM05D003119 ORTHO05D003559 1.0e-142 510.8 350 70.3
RcHm_v2.0_Chr7g0179741 Rosa chinensis HOM05D003119 ORTHO05D003559 1.3e-142 510.4 397 64.5
Haze_07437 Corylus avellana HOM05D003119 ORTHO05D003559 1.7e-142 510.0 433 59.8
arahy.Tifrunner.gnm1.ann1.P53GXH Arachis hypogaea HOM05D003119 ORTHO05D003559 8.5e-142 507.7 400 62.0
Sopen03g032870 Solanum pennellii HOM05D003119 ORTHO05D003559 1.9e-141 506.5 271 88.6
CsaV3_1G001810 Cucumis sativus L. HOM05D003119 ORTHO05D003559 1.6e-140 503.4 407 61.2
Psat0s489g0080 Pisum sativum HOM05D003119 ORTHO05D003559 3.6e-140 502.3 353 67.7
Rhsim08G0167900 Rhododendron simsii HOM05D003119 ORTHO05D003559 4.7e-140 501.9 372 66.1
Medtr3g078410 Medicago truncatula HOM05D003119 ORTHO05D003559 6.1e-140 501.5 351 68.7
VMungo1309G2946 Vigna mungo HOM05D003119 ORTHO05D003559 4.4e-138 495.4 351 68.1
Cpa.g.sc35.39 Carica papaya HOM05D003119 ORTHO05D003559 5.7e-138 495.0 350 66.6
Phvul.009G182100 Phaseolus vulgaris HOM05D003119 ORTHO05D003559 2.2e-137 493.0 351 67.5
arahy.Tifrunner.gnm1.ann1.7YSS56 Arachis hypogaea HOM05D003119 ORTHO05D003559 3.7e-137 492.3 351 66.7
FAN13G2511 Fragaria x ananassa HOM05D003119 ORTHO05D003559 1.0e-134 484.2 431 59.6
ClCG06G016700 Citrullus lanatus HOM05D003119 ORTHO05D003559 2.5e-133 479.6 407 59.2
SEGI_13141 Sequoiadendron giganteum HOM05D003119 ORTHO05D003559 4.0e-123 445.7 404 54.7
TPR.G31478 Trifolium pratense HOM05D003119 ORTHO05D003559 4.8e-121 438.7 319 66.5
Zm00001eb068240 Zea mays HOM05D003119 ORTHO05D003559 1.6e-116 423.7 405 53.8
Sabra12G0054000 Salix brachista HOM05D003119 ORTHO05D003559 2.0e-114 416.8 357 58.5
Nitab4.5_0008441g0010 Nicotiana tabacum HOM05D003119 ORTHO05D003559 5.7e-114 415.2 404 52.0
Nitab4.5_0000707g0170 Nicotiana tabacum HOM05D003119 ORTHO05D003559 2.2e-113 413.3 404 52.2
TAR633G1226 Trochodendron aralioides HOM05D003119 ORTHO05D003559 2.2e-113 413.3 408 51.0
Nn7g36274 Nelumbo nucifera HOM05D003119 ORTHO05D003559 6.3e-113 411.8 405 50.1
PSO063G0387 Papaver somniferum HOM05D003119 ORTHO05D003559 4.1e-112 409.1 398 50.8
vmacro13692 Vaccinium macrocarpon HOM05D003119 ORTHO05D003559 4.1e-112 409.1 402 51.2
Solyc01g087610.3 Solanum lycopersicum HOM05D003119 ORTHO05D003559 1.6e-111 407.1 404 51.7
Gorai.004G170700 Gossypium raimondii HOM05D003119 ORTHO05D003559 4.5e-111 405.6 400 49.8
Peaxi162Scf00694g00124 Petunia axillaris HOM05D003119 ORTHO05D003559 4.5e-111 405.6 408 51.0
Gohir.A08G142900 Gossypium hirsutum HOM05D003119 ORTHO05D003559 5.9e-111 405.2 400 49.5
Gohir.D08G163800 Gossypium hirsutum HOM05D003119 ORTHO05D003559 5.9e-111 405.2 400 49.8
COL.COLO4_04878 Corchorus olitorius HOM05D003119 ORTHO05D003559 1.3e-110 404.1 399 48.9
Prupe.2G020300 Prunus persica HOM05D003119 ORTHO05D003559 1.3e-110 404.1 403 49.6
Duzib133G0610 Durio zibethinus HOM05D003119 ORTHO05D003559 1.7e-110 403.7 399 49.9
Sopen01g034580 Solanum pennellii HOM05D003119 ORTHO05D003559 1.7e-110 403.7 404 51.5
Zm00001eb394460 Zea mays HOM05D003119 ORTHO05D003559 1.7e-110 403.7 403 48.6
Thecc.01G407300 Theobroma cacao HOM05D003119 ORTHO05D003559 5.0e-110 402.1 399 49.6
Cpa.g.sc125.32 Carica papaya HOM05D003119 ORTHO05D003559 6.6e-110 401.7 402 49.8
Cc02_g29010 Coffea canephora HOM05D003119 ORTHO05D003559 6.6e-110 401.7 401 50.4
FAN10G2435 Fragaria x ananassa HOM05D003119 ORTHO05D003559 6.6e-110 401.7 415 48.7
MBI14_g13279_MAGBIO Magnolia biondii HOM05D003119 ORTHO05D003559 6.6e-110 401.7 542 41.5
MSTRG.20565 Avicennia marina HOM05D003119 ORTHO05D003559 8.6e-110 401.4 415 49.6
CAN.G219.63 Capsicum annuum HOM05D003119 ORTHO05D003559 1.5e-109 400.6 404 51.0
Eucgr.G03358 Eucalyptus grandis HOM05D003119 ORTHO05D003559 1.9e-109 400.2 403 49.9
CANSAT80G1880 Cannabis sativa HOM05D003119 ORTHO05D003559 3.3e-109 399.4 402 49.8
Lsat_1_v5_gn_4_32101 Lactuca sativa HOM05D003119 ORTHO05D003559 3.3e-109 399.4 405 49.9
HPP92_012079 Vanilla planifolia HOM05D003119 ORTHO05D003559 4.2e-109 399.1 399 48.6
TWI60G0203 Tripterygium wilfordii HOM05D003119 ORTHO05D003559 1.6e-108 397.1 402 50.2
AUR62023087 Chenopodium quinoa HOM05D003119 ORTHO05D003559 3.6e-108 396.0 399 48.9
ATR0626G097 Amborella trichopoda HOM05D003119 ORTHO05D003559 4.7e-108 395.6 401 48.6
Migut.B01276 Erythranthe guttata HOM05D003119 ORTHO05D003559 4.7e-108 395.6 398 49.5
Manes.10G139100 Manihot esculenta HOM05D003119 ORTHO05D003559 4.7e-108 395.6 399 49.4
SalBow5G4976 Salvia bowleyana HOM05D003119 ORTHO05D003559 4.7e-108 395.6 400 49.8
CSS0027617 Camellia sinensis var. sinensis HOM05D003119 ORTHO05D003559 1.4e-107 394.0 399 48.1
Hma1.2p1_1042F.1_g251140 Hydrangea macrophylla HOM05D003119 ORTHO05D003559 1.4e-107 394.0 398 50.3
HPP92_012082 Vanilla planifolia HOM05D003119 ORTHO05D003559 1.4e-107 394.0 398 49.5
GSVIVG01032165001 Vitis vinifera HOM05D003119 ORTHO05D003559 1.8e-107 393.7 403 49.6
FAN01G3156 Fragaria x ananassa HOM05D003119 ORTHO05D003559 2.3e-107 393.3 415 47.7
Lj7A574G60 Lonicera japonica HOM05D003119 ORTHO05D003559 3.0e-107 392.9 407 50.1
RcHm_v2.0_Chr1g0317311 Rosa chinensis HOM05D003119 ORTHO05D003559 3.0e-107 392.9 399 49.1
Glyma.10G091000 Glycine max HOM05D003119 ORTHO05D003559 4.0e-107 392.5 406 48.5
CSS0008603 Camellia sinensis var. sinensis HOM05D003119 ORTHO05D003559 5.2e-107 392.1 399 48.1
Aqoxy4G00031 Aquilegia oxysepala HOM05D003119 ORTHO05D003559 8.9e-107 391.3 400 49.5
MD07G1018500 Malus domestica HOM05D003119 ORTHO05D003559 8.9e-107 391.3 403 48.6
Potri.009G058100 Populus trichocarpa HOM05D003119 ORTHO05D003559 8.9e-107 391.3 403 48.6
AL6G24300 Arabidopsis lyrata HOM05D003119 ORTHO05D003559 1.5e-106 390.6 401 48.9
Cfa010802 Carpinus fangiana HOM05D003119 ORTHO05D003559 1.5e-106 390.6 398 48.5
Sp6g30330 Schrenkiella parvula HOM05D003119 ORTHO05D003559 2.6e-106 389.8 401 48.1
AT5G13690 Arabidopsis thaliana HOM05D003119 ORTHO05D003559 3.4e-106 389.4 404 49.0
FAN06G3340 Fragaria x ananassa HOM05D003119 ORTHO05D003559 4.4e-106 389.0 400 48.5
HanXRQChr16g0524981 Helianthus annuus HOM05D003119 ORTHO05D003559 7.5e-106 388.3 399 48.9
VMungo1080G0526 Vigna mungo HOM05D003119 ORTHO05D003559 9.8e-106 387.9 400 49.0
EL10Ac2g04355 Beta vulgaris HOM05D003119 ORTHO05D003559 1.3e-105 387.5 400 49.0
Carub.0006s1185 Capsella rubella HOM05D003119 ORTHO05D003559 2.2e-105 386.7 402 49.5
CARHR199750 Cardamine hirsuta HOM05D003119 ORTHO05D003559 2.2e-105 386.7 401 48.4
CiPaw.13G007600 Carya illinoinensis HOM05D003119 ORTHO05D003559 2.9e-105 386.3 401 49.1
Lj3g0004567 Lotus japonicus HOM05D003119 ORTHO05D003559 1.1e-104 384.4 406 48.8
FAN01G1325 Fragaria x ananassa HOM05D003119 ORTHO05D003559 4.1e-104 382.5 442 45.5
arahy.Tifrunner.gnm1.ann1.SMYW0Q Arachis hypogaea HOM05D003119 ORTHO05D003559 5.4e-104 382.1 423 47.3
BcaNung04192 Brassica carinata HOM05D003119 ORTHO05D003559 5.4e-104 382.1 396 49.0
PGR031G0137 Punica granatum HOM05D003119 ORTHO05D003559 5.4e-104 382.1 401 48.4
AUR62009404 Chenopodium quinoa HOM05D003119 ORTHO05D003559 7.0e-104 381.7 392 48.2
arahy.Tifrunner.gnm1.ann1.X582RR Arachis hypogaea HOM05D003119 ORTHO05D003559 9.2e-104 381.3 434 46.8
Aa31sc576G10 Aethionema arabicum HOM05D003119 ORTHO05D003559 1.2e-103 380.9 402 48.5
Ca_14529_v3 Cicer arietinum L. HOM05D003119 ORTHO05D003559 1.2e-103 380.9 403 46.9
Lalb_Chr04g0263891 Lupinus albus HOM05D003119 ORTHO05D003559 1.2e-103 380.9 399 47.9
Medtr3g032980 Medicago truncatula HOM05D003119 ORTHO05D003559 1.6e-103 380.6 403 47.1
ECA234G0904 Erigeron canadensis HOM05D003119 ORTHO05D003559 2.0e-103 380.2 404 48.3
Sc10g0000230 Simmondsia chinensis HOM05D003119 ORTHO05D003559 5.9e-103 378.6 402 48.3
Phvul.005G023300 Phaseolus vulgaris HOM05D003119 ORTHO05D003559 7.8e-103 378.3 402 47.3
QL04p009441 Quercus lobata HOM05D003119 ORTHO05D003559 2.3e-102 376.7 398 47.2
CiPaw.14G002300 Carya illinoinensis HOM05D003119 ORTHO05D003559 3.9e-102 375.9 398 46.7
Ciclev10030724m.g Citrus clementina HOM05D003119 ORTHO05D003559 1.1e-101 374.4 406 46.3
THA.LOC104809848 Tarenaya hassleriana HOM05D003119 ORTHO05D003559 1.5e-101 374.0 403 45.7
QL04p009277 Quercus lobata HOM05D003119 ORTHO05D003559 2.3e-99 366.7 398 46.5
CsaV3_7G030810 Cucumis sativus L. HOM05D003119 ORTHO05D003559 5.2e-99 365.5 398 47.7
Sed0001972 Sechium edule HOM05D003119 ORTHO05D003559 6.8e-99 365.2 398 47.0
unitig_61.g26361 Utricularia gibba HOM05D003119 ORTHO05D003559 1.2e-98 364.4 400 48.8
BcaC04g24265 Brassica carinata HOM05D003119 ORTHO05D003559 2.9e-97 359.8 400 46.8
Dinv43414 Davidia involucrata HOM05D003119 ORTHO05D003559 6.4e-97 358.6 398 47.0
Psat5g211360 Pisum sativum HOM05D003119 ORTHO05D003559 1.9e-96 357.1 398 44.7
Pp3c17_12040 Physcomitrium patens HOM05D003119 ORTHO05D003559 7.0e-96 355.1 407 45.7
Thhalv10012727m.g Eutrema salsugineum HOM05D003119 ORTHO05D003559 1.2e-95 354.4 403 45.7
TPR.G28382 Trifolium pratense HOM05D000009 ORTHO05D003559 4.6e-95 352.4 384 46.4
AagrBONN_evm.TU.Sc2ySwM_362.673 Anthoceros agrestis HOM05D003119 ORTHO05D003559 3.9e-94 349.4 398 46.7
MELO3C023569.2 Cucumis melo HOM05D003119 ORTHO05D003559 5.0e-94 349.0 398 46.2
SMO141G0099 Selaginella moellendorffii HOM05D003119 ORTHO05D003559 8.1e-92 341.7 398 44.7
Mapoly0144s0027 Marchantia polymorpha HOM05D003119 ORTHO05D003559 1.1e-91 341.3 405 45.2
Sabra09G0042700 Salix brachista HOM05D003119 ORTHO05D003559 1.7e-89 334.0 402 44.3
SGA_v2.0_scaffold119G32756 Striga asiatica HOM05D003119 ORTHO05D003559 3.7e-89 332.8 400 43.8
Migut.D01907 Erythranthe guttata HOM05D003119 ORTHO05D003559 8.3e-89 331.6 298 57.4
CDE11G1116 Ceratophyllum demersum HOM05D003119 ORTHO05D003559 3.5e-87 326.2 319 49.5
Atru.chr11.2581 Acer truncatum HOM05D003119 ORTHO05D003559 1.1e-83 314.7 326 49.4
ClCG09G003910 Citrullus lanatus HOM05D003119 ORTHO05D003559 6.8e-83 312.0 398 43.2
DCAR_003225 Daucus carota HOM05D003119 ORTHO05D003559 2.2e-81 307.0 323 45.5
Haze_03156 Corylus avellana HOM05D003119 ORTHO05D003559 4.9e-81 305.8 323 48.6
Rhsim07G0058300 Rhododendron simsii HOM05D003119 ORTHO05D003559 1.7e-78 297.4 399 42.1
FvH4_7g01470 Fragaria vesca HOM05D003119 ORTHO05D003559 2.3e-70 270.4 301 48.2
Actinidia04959 Actinidia chinensis HOM05D003119 ORTHO05D003559 9.3e-64 248.4 142 75.4
Prupe.5G179500 Prunus persica HOM05D003119 ORTHO05D003559 1.6e-60 237.7 135 77.0
SEGI_39203 Sequoiadendron giganteum HOM05D003119 ORTHO05D003559 7.6e-58 228.8 185 55.1
Actinidia04960 Actinidia chinensis HOM05D003119 ORTHO05D003559 9.6e-53 211.8 184 59.2
Sopen03g032890 Solanum pennellii HOM05D003119 ORTHO05D003559 1.0e-49 201.8 123 80.5
Solyc03g113840.3 Solanum lycopersicum HOM05D003119 ORTHO05D003559 1.8e-46 191.0 121 77.7
Psat1g210400 Pisum sativum HOM05D003119 ORTHO05D003559 2.6e-21 107.5 83 66.3
Psat1g118360 Pisum sativum HOM05D003119 ORTHO05D003559 5.7e-21 106.3 83 65.1
Psat1g205680 Pisum sativum HOM05D003119 ORTHO05D003559 5.7e-21 106.3 83 65.1
CANSAT11G1746 Cannabis sativa HOM05D003119 ORTHO05D003559 2.4e-19 100.9 82 62.2
TPR.G33008 Trifolium pratense HOM05D003119 ORTHO05D003559 2.6e-18 97.4 82 59.8
MCO16G065 Micromonas commoda HOM05D003119 ORTHO05D003559 2.9e-17 94.0 388 25.8
Medtr3g435710 Medicago truncatula HOM05D003119 ORTHO05D003559 5.0e-17 93.2 107 39.3
Psat1g118400 Pisum sativum HOM05D003119 ORTHO05D003559 7.0e-11 72.8 61 63.9
Aqoxy7G01930 Aquilegia oxysepala HOM05D000034 ORTHO05D000285 1.5e-08 65.1 46 60.9
AUR62029809 Chenopodium quinoa HOM05D003119 ORTHO05D003559 3.2e-08 63.9 79 45.6
Solyc12g035430.1 Solanum lycopersicum HOM05D003119 ORTHO05D003559 4.2e-08 63.5 75 48.0
CDE11G0497 Ceratophyllum demersum HOM05D003119 ORTHO05D003559 1.2e-07 62.0 37 70.3
Sabra12G0054100 Salix brachista HOM05D003119 ORTHO05D003559 1.2e-07 62.0 37 73.0
Aqoxy5G02986 Aquilegia oxysepala HOM05D007314 ORTHO05D000285 2.1e-07 61.2 58 48.3
Aqoxy7G02664 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 2.7e-07 60.8 44 59.1
Psat1g147240 Pisum sativum HOM05D003119 ORTHO05D003559 2.7e-07 60.8 33 81.8


User provided reference genes

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