Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G853.13 Capsicum annuum HOM05D006519 ORTHO05D008306 3.2e-159 565.1 291 100.0
PGSC0003DMG400024585 Solanum tuberosum HOM05D006519 ORTHO05D008306 1.3e-149 533.1 291 94.8
Solyc03g113860.2 Solanum lycopersicum HOM05D006519 ORTHO05D008306 2.4e-146 522.3 291 92.8
Sopen03g032910 Solanum pennellii HOM05D006519 ORTHO05D008306 3.8e-144 515.0 291 91.8
Nitab4.5_0003386g0010 Nicotiana tabacum HOM05D006519 ORTHO05D008306 1.1e-140 503.4 291 89.0
Oeu016332.2 Olea europaea HOM05D006519 ORTHO05D008306 5.9e-105 384.8 281 72.6
MD06G1181000 Malus domestica HOM05D006519 ORTHO05D008306 2.7e-102 375.9 276 70.3
RcHm_v2.0_Chr7g0179701 Rosa chinensis HOM05D006519 ORTHO05D008306 1.4e-101 373.6 276 67.4
Peaxi162Scf00017g02523 Petunia axillaris HOM05D006519 ORTHO05D008306 1.8e-101 373.2 210 89.0
Lsat_1_v5_gn_4_73480 Lactuca sativa HOM05D006519 ORTHO05D008306 2.3e-101 372.9 291 67.7
CANSAT80G0931 Cannabis sativa HOM05D006519 ORTHO05D008306 1.5e-100 370.2 276 67.4
Gorai.012G002000 Gossypium raimondii HOM05D006519 ORTHO05D008306 1.5e-100 370.2 288 67.0
DCAR_031285 Daucus carota HOM05D006519 ORTHO05D008306 2.6e-100 369.4 273 69.2
Hund02710 Selenicereus undatus HOM05D006519 ORTHO05D008306 2.6e-100 369.4 275 69.1
Prupe.5G179000 Prunus persica HOM05D006519 ORTHO05D008306 5.7e-100 368.2 277 67.9
CiPaw.11G031700 Carya illinoinensis HOM05D006519 ORTHO05D008306 7.4e-100 367.9 280 66.1
ECA232G3316 Erigeron canadensis HOM05D006519 ORTHO05D008306 7.4e-100 367.9 291 66.7
Actinidia34959 Actinidia chinensis HOM05D006519 ORTHO05D008306 1.7e-99 366.7 278 67.6
Nn3g17016 Nelumbo nucifera HOM05D006519 ORTHO05D008306 2.2e-99 366.3 283 66.4
Gohir.D04G001000 Gossypium hirsutum HOM05D006519 ORTHO05D008306 4.8e-99 365.2 288 66.7
Ah.11g046180 Amaranthus hybridus HOM05D006519 ORTHO05D008306 8.2e-99 364.4 275 65.8
Cc04_g13570 Coffea canephora HOM05D006519 ORTHO05D008306 8.2e-99 364.4 280 68.6
Duzib068G0259 Durio zibethinus HOM05D006519 ORTHO05D008306 1.4e-98 363.6 286 66.1
TAR629G1196 Trochodendron aralioides HOM05D006519 ORTHO05D008306 1.4e-98 363.6 274 67.9
TWI81G0852 Tripterygium wilfordii HOM05D006519 ORTHO05D008306 1.8e-98 363.2 280 65.0
Thecc.03G004500 Theobroma cacao HOM05D006519 ORTHO05D008306 2.4e-98 362.8 287 63.8
Haze_07439 Corylus avellana HOM05D006519 ORTHO05D008306 3.1e-98 362.5 285 66.0
MSTRG.11426 Avicennia marina HOM05D006519 ORTHO05D008306 4.1e-98 362.1 304 65.1
FvH4_5g16400 Fragaria vesca HOM05D006519 ORTHO05D008306 5.3e-98 361.7 276 65.2
FAN18G3891 Fragaria x ananassa HOM05D006519 ORTHO05D008306 5.3e-98 361.7 276 65.2
Ciclev10021480m.g Citrus clementina HOM05D006519 ORTHO05D008306 7.0e-98 361.3 277 66.4
Migut.I00056 Erythranthe guttata HOM05D006519 ORTHO05D008306 1.5e-97 360.1 287 66.9
Gohir.A05G415200 Gossypium hirsutum HOM05D006519 ORTHO05D008306 1.5e-97 360.1 282 66.3
HanXRQChr09g0271821 Helianthus annuus HOM05D006519 ORTHO05D008306 2.6e-97 359.4 293 64.2
GSVIVG01007824001 Vitis vinifera HOM05D006519 ORTHO05D008306 2.6e-97 359.4 278 66.5
Potri.012G076100 Populus trichocarpa HOM05D006519 ORTHO05D008306 3.5e-97 359.0 282 63.8
Sc12g0005660 Simmondsia chinensis HOM05D006519 ORTHO05D008306 4.5e-97 358.6 275 66.9
CSS0037543 Camellia sinensis var. sinensis HOM05D006519 ORTHO05D008306 1.0e-96 357.5 275 65.5
FAN13G2537 Fragaria x ananassa HOM05D006519 ORTHO05D008306 1.3e-96 357.1 276 65.2
CSS0018091 Camellia sinensis var. sinensis HOM05D006519 ORTHO05D008306 8.5e-96 354.4 275 65.5
Sabra12G0054300 Salix brachista HOM05D006519 ORTHO05D008306 8.5e-96 354.4 280 62.9
FAN08G1114 Fragaria x ananassa HOM05D006519 ORTHO05D008306 4.2e-95 352.1 274 64.6
Lj4g0003537 Lotus japonicus HOM05D006519 ORTHO05D008306 3.9e-93 345.5 276 64.1
THA.LOC104809258 Tarenaya hassleriana HOM05D006519 ORTHO05D008306 3.9e-93 345.5 292 59.2
SalBow5G0752 Salvia bowleyana HOM05D006519 ORTHO05D008306 6.7e-93 344.7 336 57.1
SalBow5G4476 Salvia bowleyana HOM05D006519 ORTHO05D008306 8.8e-93 344.4 336 56.8
MBI14_g12785_MAGBIO Magnolia biondii HOM05D006519 ORTHO05D008306 2.0e-92 343.2 273 64.1
Psat0s1227g0160 Pisum sativum HOM05D006519 ORTHO05D008306 1.1e-90 337.4 280 61.4
TPR.G37507 Trifolium pratense HOM05D006519 ORTHO05D008306 1.1e-90 337.4 276 63.0
Sed0010209 Sechium edule HOM05D006519 ORTHO05D008306 1.4e-90 337.0 281 64.1
CsaV3_1G008220 Cucumis sativus L. HOM05D006519 ORTHO05D008306 2.4e-90 336.3 284 62.0
Carub.0008s1012 Capsella rubella HOM05D006519 ORTHO05D008306 3.1e-90 335.9 275 60.7
AUR62008282 Chenopodium quinoa HOM05D006519 ORTHO05D008306 4.1e-90 335.5 266 63.2
MELO3C002238.2 Cucumis melo HOM05D006519 ORTHO05D008306 9.1e-90 334.3 284 62.3
Lalb_Chr07g0182571 Lupinus albus HOM05D006519 ORTHO05D008306 9.1e-90 334.3 295 60.7
AT5G50110 Arabidopsis thaliana HOM05D006519 ORTHO05D008306 2.0e-89 333.2 274 60.2
Medtr4g106410 Medicago truncatula HOM05D006519 ORTHO05D008306 3.5e-89 332.4 287 58.9
Glyma.05G033800 Glycine max HOM05D006519 ORTHO05D008306 1.0e-88 330.9 276 60.5
EL10Ac5g10829 Beta vulgaris HOM05D006519 ORTHO05D008306 1.3e-88 330.5 332 53.0
ClCG01G014120 Citrullus lanatus HOM05D006519 ORTHO05D008306 1.3e-88 330.5 301 58.8
Sp6g11980 Schrenkiella parvula HOM05D006519 ORTHO05D008306 1.7e-88 330.1 280 58.6
arahy.Tifrunner.gnm1.ann1.L198ZR Arachis hypogaea HOM05D006519 ORTHO05D008306 5.0e-88 328.6 293 59.0
A03p27660 Brassica napus HOM05D006519 ORTHO05D008306 2.5e-87 326.2 275 60.4
BraA03t11979Z Brassica rapa HOM05D006519 ORTHO05D008306 2.5e-87 326.2 275 60.4
arahy.Tifrunner.gnm1.ann1.IBQC5J Arachis hypogaea HOM05D006519 ORTHO05D008306 3.2e-87 325.9 272 61.4
CARHR258520 Cardamine hirsuta HOM05D006519 ORTHO05D008306 3.2e-87 325.9 274 58.0
PSO591G0501 Papaver somniferum HOM05D006519 ORTHO05D008306 9.4e-87 324.3 301 57.5
Atru.chr9.2404 Acer truncatum HOM05D006519 ORTHO05D008306 2.7e-86 322.8 276 62.3
BolC3t15659H Brassica oleracea HOM05D006519 ORTHO05D008306 2.7e-86 322.8 275 59.3
Ca_21889_v3 Cicer arietinum L. HOM05D006519 ORTHO05D008306 3.6e-86 322.4 270 61.1
BcaC01g04830 Brassica carinata HOM05D006519 ORTHO05D008306 4.7e-86 322.0 275 59.3
PGR083G2560 Punica granatum HOM05D006519 ORTHO05D008306 8.0e-86 321.2 278 60.4
BcaB01g02918 Brassica carinata HOM05D006519 ORTHO05D008306 1.8e-85 320.1 280 57.5
C03p33370 Brassica napus HOM05D006519 ORTHO05D008306 1.8e-85 320.1 275 58.9
Aa31sc174G50 Aethionema arabicum HOM05D006519 ORTHO05D008306 8.8e-85 317.8 289 56.1
SGA_v2.0_scaffold467G52031 Striga asiatica HOM05D006519 ORTHO05D008306 3.1e-82 309.3 253 65.2
ATR0314G030 Amborella trichopoda HOM05D006519 ORTHO05D008306 1.6e-81 307.0 262 61.5
COL.COLO4_04635 Corchorus olitorius HOM05D006519 ORTHO05D008306 2.9e-80 302.8 237 67.9
Eucgr.B00339 Eucalyptus grandis HOM05D006519 ORTHO05D008306 1.5e-79 300.4 209 70.8
Rhsim12G0161700 Rhododendron simsii HOM05D006519 ORTHO05D008306 1.6e-78 297.0 280 60.7
Thhalv10014373m.g Eutrema salsugineum HOM05D006519 ORTHO05D008306 1.2e-76 290.8 280 54.6
AL8G24100 Arabidopsis lyrata HOM05D006519 ORTHO05D008306 2.8e-75 286.2 209 64.6
Mapoly0003s0145 Marchantia polymorpha HOM05D006519 ORTHO05D008306 4.8e-75 285.4 234 61.1
Zm00001eb279990 Zea mays HOM05D006519 ORTHO05D008306 4.8e-75 285.4 230 59.1
Phvul.003G197000 Phaseolus vulgaris HOM05D006519 ORTHO05D008306 1.6e-73 280.4 197 69.5
Lj9C454G3 Lonicera japonica HOM05D006519 ORTHO05D008306 5.9e-73 278.5 295 55.6
AUR62031043 Chenopodium quinoa HOM05D006519 ORTHO05D008306 1.0e-72 277.7 215 64.2
unitig_62.g23572 Utricularia gibba HOM05D006519 ORTHO05D008306 2.9e-72 276.2 232 59.9
Pp3c21_11830 Physcomitrium patens HOM05D006519 ORTHO05D008306 2.5e-71 273.1 239 56.9
SMO236G0037 Selaginella moellendorffii HOM05D006519 ORTHO05D008306 2.6e-68 263.1 229 58.1
Nitab4.5_0001642g0020 Nicotiana tabacum HOM05D006519 ORTHO05D008306 1.9e-63 246.9 133 93.2
Hma1.2p1_0002F.1_g002810 Hydrangea macrophylla HOM05D006519 ORTHO05D008306 2.8e-62 243.0 221 61.1
vmacro16588 Vaccinium macrocarpon HOM05D006519 ORTHO05D008306 2.3e-61 240.0 176 69.3
MD14G1186100 Malus domestica HOM05D006519 ORTHO05D008306 7.0e-58 228.4 222 57.7
MD14G1186900 Malus domestica HOM05D006519 ORTHO05D008306 9.2e-58 228.0 166 71.1
Manes.06G100700 Manihot esculenta HOM05D006519 ORTHO05D008306 1.3e-56 224.2 192 60.9
Nitab4.5_0001642g0010 Nicotiana tabacum HOM05D006519 ORTHO05D008306 3.0e-56 223.0 147 83.0
Hma1.2p1_0002F.1_g002800 Hydrangea macrophylla HOM05D006519 ORTHO05D008306 3.6e-54 216.1 187 64.2
MD13G1183500 Malus domestica HOM05D006519 ORTHO05D008306 9.8e-52 208.0 163 68.1
VMungo1215G1861 Vigna mungo HOM05D006519 ORTHO05D008306 3.3e-47 193.0 221 48.0
HPP92_010835 Vanilla planifolia HOM05D006519 ORTHO05D008306 7.3e-47 191.8 177 58.2
AagrBONN_evm.TU.Sc2ySwM_228.2029 Anthoceros agrestis HOM05D006519 ORTHO05D008306 8.1e-46 188.3 176 56.2
Cre09.g394584 Chlamydomonas reinhardtii HOM05D006519 ORTHO05D008306 2.6e-44 183.3 305 37.7
MCO15G300 Micromonas commoda HOM05D006519 ORTHO05D008306 1.1e-39 167.9 257 42.8
Actinidia19081 Actinidia chinensis HOM05D006519 ORTHO05D008306 7.3e-39 165.2 143 58.7
Glyma.17G093302 Glycine max HOM05D006519 ORTHO05D008306 1.3e-35 154.5 100 74.0
Cpa.g.sc35.56 Carica papaya HOM05D006519 ORTHO05D008306 1.9e-34 150.6 100 75.0
SEGI_15669 Sequoiadendron giganteum HOM05D006519 ORTHO05D008306 3.9e-32 142.9 169 50.3
arahy.Tifrunner.gnm1.ann1.KZGX7R Arachis hypogaea HOM05D006519 ORTHO05D008306 9.0e-29 131.7 104 63.5
HanXRQChr11g0328331 Helianthus annuus HOM05D006519 ORTHO05D008306 1.5e-28 131.0 101 62.4
C05p16930 Brassica napus HOM05D006519 ORTHO05D008306 8.4e-27 125.2 108 59.3
arahy.Tifrunner.gnm1.ann1.J4WABN Arachis hypogaea HOM05D006519 ORTHO05D008306 1.4e-26 124.4 97 60.8
CDE06G0478 Ceratophyllum demersum HOM05D006519 ORTHO05D008306 7.1e-26 122.1 88 65.9
Os06g0239000 Oryza sativa ssp. japonica HOM05D006519 ORTHO05D008306 6.0e-25 119.0 100 61.0
arahy.Tifrunner.gnm1.ann1.9L22J7 Arachis hypogaea HOM05D006519 ORTHO05D014446 2.1e-22 110.5 102 58.8
PRCOL_00000545 Prasinoderma coloniale HOM05D006519 ORTHO05D008306 2.9e-19 100.1 233 30.9
Dinv20697 Davidia involucrata HOM05D006519 ORTHO05D008306 2.4e-18 97.1 152 44.7
BcaC05g25762 Brassica carinata HOM05D006519 ORTHO05D008306 7.1e-18 95.5 89 56.2
arahy.Tifrunner.gnm1.ann1.MFZI3Y Arachis hypogaea HOM05D005365 ORTHO05D006910 3.0e-16 90.1 84 50.0
CBR_g30328 Chara braunii HOM05D000019 ORTHO05D000048 3.3e-15 86.7 107 45.8
arahy.Tifrunner.gnm1.ann1.4TMU9W Arachis hypogaea HOM05D005365 ORTHO05D006910 2.1e-14 84.0 68 60.3
arahy.Tifrunner.gnm1.ann1.RNN7F2 Arachis hypogaea HOM05D006519 ORTHO05D008306 6.2e-14 82.4 65 63.1
arahy.Tifrunner.gnm1.ann1.PY279F Arachis hypogaea HOM05D006519 ORTHO05D008306 1.1e-13 81.6 65 66.2
SEGI_16810 Sequoiadendron giganteum HOM05D006519 ORTHO05D008306 1.2e-12 78.2 47 74.5
Potri.015G071001 Populus trichocarpa HOM05D006519 ORTHO05D008306 3.4e-12 76.6 54 68.5


User provided reference genes

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